prot_F-serratus_M_contig111.1030.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig111.1030.1
Unique Nameprot_F-serratus_M_contig111.1030.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length182
Homology
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: D7G284_ECTSI (50S ribosomal protein L20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G284_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 4.640e-62
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0
Query:   66 MAASNFKHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVETVKAKGS 177
            MAA+N +HKKILK+AKGYRGRSKSVFKIAIQ+VEKALQQAYRDRKNKKR+FRRLWIERINAGVRQHGM YS+F+N A+KADV+LNRKVLAEMAVTEPYSFRAVVETVKAKGS
Sbjct:    1 MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKNKKREFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAKGS 112          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A2S6SBV7_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha6_Bin2 TaxID=2013089 RepID=A0A2S6SBV7_9PROT)

HSP 1 Score: 144 bits (362), Expect = 3.660e-41
Identity = 70/112 (62.50%), Postives = 94/112 (83.93%), Query Frame = 0
Query:   64 RGMAASNFKHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVETVKAK 175
            RG+ A + KHKKILKMAKGYRGRSK+VF+IA+QKVEK LQ AYRDR+ KKR+FR LWI++INAG R+HGMSYS FI   KKA+++++RK+LA++A+  P +F+ +VE V+ +
Sbjct:    6 RGVQAKS-KHKKILKMAKGYRGRSKNVFRIAVQKVEKGLQYAYRDRRTKKRNFRALWIQKINAGTREHGMSYSQFIKGMKKAEIEIDRKILADIALNNPITFKFIVEKVRGR 116          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A3B9VH17_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9VH17_9PROT)

HSP 1 Score: 143 bits (361), Expect = 4.590e-41
Identity = 70/111 (63.06%), Postives = 91/111 (81.98%), Query Frame = 0
Query:   64 RGMAASNFKHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVETVKA 174
            +G   S  +H KI+KMAKGYRGR+KS F++A++KVEKALQ AYRDR+NKKRDFRRLWI RINA  RQHG+SYS+FIN  K A+++++RKVLA +A+T+  +F A+VE  KA
Sbjct:    5 KGGVTSRRRHNKIIKMAKGYRGRNKSCFRVAVEKVEKALQYAYRDRRNKKRDFRRLWITRINAATRQHGLSYSVFINALKAANIEIDRKVLAHVAMTDAKAFSAIVEKAKA 115          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A2S6SQA5_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha6_Bin1 TaxID=2013088 RepID=A0A2S6SQA5_9PROT)

HSP 1 Score: 142 bits (359), Expect = 1.040e-40
Identity = 65/102 (63.73%), Postives = 91/102 (89.22%), Query Frame = 0
Query:   72 KHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVETVK 173
            +HKKILKMAKGYRGRSK+VF++AIQ+VEKALQ AYRDR+ KKR+FR LWI+RINAG R+HGMSYS FI+  KKA+++++RK+L+++A+  P +F+++VE ++
Sbjct:   13 RHKKILKMAKGYRGRSKNVFRVAIQRVEKALQYAYRDRRTKKRNFRALWIQRINAGTREHGMSYSQFIHGIKKAEIEIDRKILSDIALNNPVTFKSIVEKIR 114          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A2S6RR86_9PROT (50S ribosomal protein L20 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6RR86_9PROT)

HSP 1 Score: 142 bits (357), Expect = 1.860e-40
Identity = 68/102 (66.67%), Postives = 87/102 (85.29%), Query Frame = 0
Query:   72 KHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVETVK 173
            KHKKI+K+AKGYRGRSK+VF+IAI+KVEK LQ AYRDR+ KKR FR LWI+RINAG R+HGMSYS FIN  KKA++D++RK+LAE+A   P +F+ +VE ++
Sbjct:   13 KHKKIIKLAKGYRGRSKNVFRIAIEKVEKGLQYAYRDRRTKKRSFRGLWIQRINAGAREHGMSYSQFINGIKKAEIDIDRKILAEIAKDNPTTFKYLVEKIR 114          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A7S2PGZ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PGZ0_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.150e-40
Identity = 72/112 (64.29%), Postives = 91/112 (81.25%), Query Frame = 0
Query:   62 QCRGMAASNFKHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVETVK 173
            Q RGMA+   KHK+++K AKG+RGR+   FK A+Q++EK+ Q AYRDRK KKR+FR+LWIERINAGVRQHGMSYS FIN +  +  +LNRKVLA+MA  EP+SF+AVV+ VK
Sbjct:   43 QSRGMASK--KHKRVIKQAKGFRGRANRTFKAALQRLEKSWQYAYRDRKQKKRNFRKLWIERINAGVRQHGMSYSKFINGSMHSGCELNRKVLADMASNEPFSFKAVVDVVK 152          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A1M3GWJ7_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium 41-28 TaxID=1895706 RepID=A0A1M3GWJ7_9PROT)

HSP 1 Score: 140 bits (354), Expect = 5.620e-40
Identity = 66/99 (66.67%), Postives = 88/99 (88.89%), Query Frame = 0
Query:   72 KHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVE 170
            +HKK+LK+AKGYRGRSK+ F+IAIQ+VEKALQ AYRDR+N+KRDFR LWI+RINAG R+HG++YS FIN   KA +D++RKVLA++AV EP +F+++V+
Sbjct:   13 RHKKVLKLAKGYRGRSKNCFRIAIQRVEKALQYAYRDRRNRKRDFRGLWIQRINAGTREHGLTYSKFINGLTKAGIDIDRKVLADLAVHEPAAFKSIVD 111          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A2A5BDS7_9RICK (50S ribosomal protein L20 n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2A5BDS7_9RICK)

HSP 1 Score: 140 bits (353), Expect = 7.500e-40
Identity = 71/105 (67.62%), Postives = 87/105 (82.86%), Query Frame = 0
Query:   69 SNFKHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVETVK 173
            S  +HKKI+KMAKGYRGR+K+ FKIAI+KVEKALQ AYRDR+N+KRDFR LWI+RINA VRQH M YS F+   KKA ++++RK+LAEMAV +P SF  +VE VK
Sbjct:   10 SKNRHKKIIKMAKGYRGRAKNCFKIAIEKVEKALQYAYRDRRNRKRDFRGLWIQRINAAVRQHDMIYSTFMGGMKKAGIEVDRKMLAEMAVNDPASFTHIVEQVK 114          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A4P5SLS5_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A4P5SLS5_9PROT)

HSP 1 Score: 139 bits (351), Expect = 1.600e-39
Identity = 69/102 (67.65%), Postives = 86/102 (84.31%), Query Frame = 0
Query:   72 KHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLNRKVLAEMAVTEPYSFRAVVETVK 173
            +HKKILK+AKGYRGR+K+ F++AI+KVEKAL+ AYRDRK +KRDFR LWI+RINAGVR+HGM YS FIN  K A +DL+RKVLA++AV EP +F  +VE  K
Sbjct:   13 RHKKILKLAKGYRGRAKNCFRVAIEKVEKALRYAYRDRKARKRDFRSLWIQRINAGVREHGMIYSKFINGLKLAKIDLDRKVLADLAVREPETFAKIVEKAK 114          
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Match: A0A7S2W484_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W484_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.360e-39
Identity = 79/128 (61.72%), Postives = 98/128 (76.56%), Query Frame = 0
Query:   49 LDYLFPKGQQSQGQCRGMAASNFKHKKILKMAKGYRGRSKSVFKIAIQKVEKALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAK-KADVDLNRKVLAEMAVTEPYSFRAVVETVKAK 175
            +D L P     Q   R MA+   KHK +LKMAKGYRGRSK+ F+ AI++VEKALQ AYRDRK KKR+FR+LWI+R+NAGVRQHGMSYS FI  A   AD+ LNR++LAE++  EP+SF+AVV+ VK K
Sbjct:  100 IDKLAPPMMMMQS--RTMASK--KHKAVLKMAKGYRGRSKNTFRAAIRRVEKALQYAYRDRKVKKRNFRKLWIQRLNAGVRQHGMSYSRFIRAAPLDADIVLNRRMLAELSTNEPFSFKAVVDVVKMK 223          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G284_ECTSI4.640e-6289.2950S ribosomal protein L20 n=1 Tax=Ectocarpus silic... [more]
A0A2S6SBV7_9PROT3.660e-4162.5050S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]
A0A3B9VH17_9PROT4.590e-4163.0650S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]
A0A2S6SQA5_9PROT1.040e-4063.7350S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]
A0A2S6RR86_9PROT1.860e-4066.6750S ribosomal protein L20 n=3 Tax=Alphaproteobacte... [more]
A0A7S2PGZ0_9STRA5.150e-4064.29Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1M3GWJ7_9PROT5.620e-4066.6750S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]
A0A2A5BDS7_9RICK7.500e-4067.6250S ribosomal protein L20 n=1 Tax=Rickettsiales ba... [more]
A0A4P5SLS5_9PROT1.600e-3967.6550S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]
A0A7S2W484_9STRA3.360e-3961.72Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
NoneNo IPR availableGENE3D1.10.720.90coord: 64..114
e-value: 7.9E-18
score: 66.2
NoneNo IPR availablePRODOMPD002389coord: 79..131
e-value: 1.0E-10
score: 157.0
IPR005813Ribosomal protein L20PRINTSPR00062RIBOSOMALL20coord: 101..130
score: 60.1
coord: 134..160
score: 46.8
coord: 71..100
score: 39.9
IPR005813Ribosomal protein L20TIGRFAMTIGR01032TIGR01032coord: 67..173
e-value: 6.1E-43
score: 143.7
IPR005813Ribosomal protein L20PFAMPF00453Ribosomal_L20coord: 68..167
e-value: 1.3E-42
score: 144.3
IPR005813Ribosomal protein L20PANTHERPTHR1098639S RIBOSOMAL PROTEIN L20coord: 68..175
IPR005813Ribosomal protein L20HAMAPMF_00382Ribosomal_L20coord: 59..174
score: 26.188
IPR035566Ribosomal protein L20, C-terminalGENE3D1.10.1900.20coord: 115..177
e-value: 1.5E-28
score: 100.1
IPR035566Ribosomal protein L20, C-terminalSUPERFAMILY74731Ribosomal protein L20coord: 69..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig111contigF-serratus_M_contig111:87315..89462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig111.1030.1mRNA_F-serratus_M_contig111.1030.1Fucus serratus malemRNAF-serratus_M_contig111 87267..90044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig111.1030.1 ID=prot_F-serratus_M_contig111.1030.1|Name=mRNA_F-serratus_M_contig111.1030.1|organism=Fucus serratus male|type=polypeptide|length=182bp
MSWSSALTRLKPQSLWSCLLKLGVGSATRESSVGGMGAALAGSSSRRSLD
YLFPKGQQSQGQCRGMAASNFKHKKILKMAKGYRGRSKSVFKIAIQKVEK
ALQQAYRDRKNKKRDFRRLWIERINAGVRQHGMSYSMFINHAKKADVDLN
RKVLAEMAVTEPYSFRAVVETVKAKGSAAKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005813Ribosomal_L20
IPR035566Ribosomal_protein_L20_C