prot_F-serratus_M_contig1020.282.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1020.282.1
Unique Nameprot_F-serratus_M_contig1020.282.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length145
Homology
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BLAST of mRNA_F-serratus_M_contig1020.282.1 vs. uniprot
Match: A0A6H5J567_9PHAE (AMMECR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J567_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 5.250e-44
Identity = 73/122 (59.84%), Postives = 89/122 (72.95%), Query Frame = 0 
Query:    3 RPDPRESFYSAPVGVLRGLHPCVCCFDALMRHLHDGSDGEALARKKSWEHPREAAVDPEVSFFVGWESPDRDLGRYVTRGFIGSFTPRPFQPALADYSVRAASQDPKFWGLGWAQVPGTRCR 124
            RPD RE  Y AP+ VL+  HPCV CFDALM HL DG+  + L R+  W      A DP V+FF+ WE+ DR LGR+V  GF GSFTP PF+PALA+Y+V+AA +DPKFWGLGWAQ+P TRC+
Sbjct:  603 RPDTREQCYGAPIEVLKSFHPCVRCFDALMGHLRDGTGAQELRRRTPWGSTA-VAGDPHVAFFIRWETMDRRLGRFVPTGFRGSFTPSPFRPALAEYAVKAAIEDPKFWGLGWAQIPDTRCK 723
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BLAST of mRNA_F-serratus_M_contig1020.282.1 vs. uniprot
Match: D7FTC2_ECTSI (AMMECR1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC2_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 6.250e-43
Identity = 75/130 (57.69%), Postives = 92/130 (70.77%), Query Frame = 0 
Query:    3 RPDPRESFYSAPVGVLRGLHPCVCCFDALMRHLHDGSDGEALARKKSWEHPREAAVDPEVSFFVGWESPDRDLGRYVTRGFIGSFTPRPFQPALADYSVRAASQDPKFWGLGWAQVPGTRCRVIVITNFE 132
            RPD RE  Y AP+ VL+  HPCV CFDALM HL DG+  E L R+ S      AA DP V+FFV WE+ DR LGR+  RGF+GSFTP PF+PALA+Y+V+AA++DPKFWGLGWA++P T   V+     E
Sbjct:  578 RPDTRERCYDAPIEVLKSFHPCVRCFDALMGHLRDGTGAEELRRRTS-SGSTVAAGDPHVAFFVRWETMDRGLGRFTPRGFMGSFTPSPFRPALAEYAVKAATEDPKFWGLGWARIPDTSYLVVRPVQHE 706
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1020.282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J567_9PHAE5.250e-4459.84AMMECR1 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FTC2_ECTSI6.250e-4357.69AMMECR1 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002733AMMECR1 domainPFAMPF01871AMMECR1coord: 25..134
e-value: 2.2E-10
score: 40.4
IPR002733AMMECR1 domainPROSITEPS51112AMMECR1coord: 12..144
score: 10.355
IPR036071AMMECR1 domain superfamilySUPERFAMILY143447AMMECR1-likecoord: 24..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1020contigF-serratus_M_contig1020:93453..95458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1020.282.1mRNA_F-serratus_M_contig1020.282.1Fucus serratus malemRNAF-serratus_M_contig1020 93453..95458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1020.282.1 ID=prot_F-serratus_M_contig1020.282.1|Name=mRNA_F-serratus_M_contig1020.282.1|organism=Fucus serratus male|type=polypeptide|length=145bp
APRPDPRESFYSAPVGVLRGLHPCVCCFDALMRHLHDGSDGEALARKKSW
EHPREAAVDPEVSFFVGWESPDRDLGRYVTRGFIGSFTPRPFQPALADYS
VRAASQDPKFWGLGWAQVPGTRCRVIVITNFEVAQVVTDSPGAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002733AMMECR1_domain
IPR036071AMMECR1_dom_sf