prot_F-serratus_M_contig102.262.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig102.262.1
Unique Nameprot_F-serratus_M_contig102.262.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length227
Homology
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BLAST of mRNA_F-serratus_M_contig102.262.1 vs. uniprot
Match: D8LU32_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU32_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.080e-26
Identity = 75/175 (42.86%), Postives = 102/175 (58.29%), Query Frame = 0 
Query:    3 GSKVTGALGSKLDTISKLLVEHKGRCDRSRGRFSALLIVSTRDLARTTPETLELMPSLQPFLRAEHVLVSSEKISFMRRASLDRLGTDLSQTNLVVSTTACSEGLEVPDCGLVVCAS----GTALAELRGRLNFGKN-CKLVGLSRRCEEAPGERFRTLCQRDSTMLGAIETIIG 172
            G  V  A GSKL  I+ LL EHK  CD S  RFSAL+ VS R+LA  TP  LE     +PF++A+ ++  SE     +R +L      L   N++VST+ C EG++VP C LVVCAS    GT L +LRGR+   +N C+ VGL+R    A     +++C R+  ML AI ++ G
Sbjct:  661 GDAVRRAGGSKLAKIAWLLEEHKRACDASGKRFSALVFVSRRELALATPAMLE---EAKPFVKAQSIVGLSEMTLNQQRRALASFQNGLK--NVLVSTSVCGEGIDVPACALVVCASLPSSGTELVQLRGRIRSKENECRFVGLTRTAGAADKAHVKSICLREQNMLEAIRSLSG 830
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BLAST of mRNA_F-serratus_M_contig102.262.1 vs. uniprot
Match: A0A0H5R4I3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4I3_9EUKA)

HSP 1 Score: 62.4 bits (150), Expect = 1.130e-7
Identity = 50/166 (30.12%), Postives = 84/166 (50.60%), Query Frame = 0 
Query:   11 GSKLDTISKLLVEHKGRCDRSRGRFSALLIVSTRDLARTTPETLELMPSLQ--PFLRAEHVLVSSEKISFMRRASLDRLGTDLSQTNLVVSTTACSEGLEVPDCGLVVCA----SGTALAELRGRLNFGKNCKLVGLSRRCEEAPGERFRTLCQRDSTMLGAIETI 170
            GS ++ I +L+ +H    D     FSAL+ VSTR LA      +EL+  +   PF++AE ++  SE     ++  L +    +   N+VVST+ C EG+++P C LV+C     S  +  ++RGR+   ++ + + + R   E        L  R+  M  AI+ I
Sbjct:  477 GSVVNKIEELVTQHY---DADPKGFSALIFVSTRGLA------IELVKHISRIPFIKAEAMVGISEMTLAQQKTVLSKFRDQV--INVVVSTSVCGEGVDIPACCLVICTCLPNSMISFVQIRGRIRSNESARYLSMVR---ERRDMHVEGLVLREDNMNEAIQQI 628
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU32_ECTSI1.080e-2642.86DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A0H5R4I3_9EUKA1.130e-730.12Uncharacterized protein n=1 Tax=Spongospora subter... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 4..122
e-value: 1.3E-6
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig102contigF-serratus_M_contig102:139688..141066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig102.262.1mRNA_F-serratus_M_contig102.262.1Fucus serratus malemRNAF-serratus_M_contig102 137762..141066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig102.262.1 ID=prot_F-serratus_M_contig102.262.1|Name=mRNA_F-serratus_M_contig102.262.1|organism=Fucus serratus male|type=polypeptide|length=227bp
VVGSKVTGALGSKLDTISKLLVEHKGRCDRSRGRFSALLIVSTRDLARTT
PETLELMPSLQPFLRAEHVLVSSEKISFMRRASLDRLGTDLSQTNLVVST
TACSEGLEVPDCGLVVCASGTALAELRGRLNFGKNCKLVGLSRRCEEAPG
ERFRTLCQRDSTMLGAIETIIGDVSATEVSAASVTSTHVAPPNTQLRFLG
RTPPHGVSWYRCRHRRSLRWRWLWWR*
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