prot_F-serratus_M_contig1014.233.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1014.233.1
Unique Nameprot_F-serratus_M_contig1014.233.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length174
Homology
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BLAST of mRNA_F-serratus_M_contig1014.233.1 vs. uniprot
Match: D7FQS3_ECTSI (F-box, zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS3_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 9.560e-19
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0 
Query:   69 EIDGRYRLVVSGLMNTLDACPAMPSETLAASLDDCLRRPS-ATATWSMRATPVLVRGVLSLVTRSPRSLCRAVVPVLVRFVTETEC 153
            + +G +  +VSGL   LDACPAMP+ TL  S++DCLRRPS   A W+  +T + V GVLSLV+ SPRSLC+AVV VLVRFV    C
Sbjct:   10 QTNGPFLALVSGLQGALDACPAMPTLTLETSIEDCLRRPSPGAAVWAFGSTRMFVSGVLSLVSSSPRSLCQAVVSVLVRFVAGDGC 95
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1014.233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQS3_ECTSI9.560e-1956.98F-box, zinc finger protein n=1 Tax=Ectocarpus sili... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1014contigF-serratus_M_contig1014:124561..129898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1014.233.1mRNA_F-serratus_M_contig1014.233.1Fucus serratus malemRNAF-serratus_M_contig1014 124560..129898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1014.233.1 ID=prot_F-serratus_M_contig1014.233.1|Name=mRNA_F-serratus_M_contig1014.233.1|organism=Fucus serratus male|type=polypeptide|length=174bp
SWVHFHFEPVRSVINHSCCDWASPAAFISGLMAEVVRALIKVQSKLPVST
PAILHVLLHRLAALSSSKEIDGRYRLVVSGLMNTLDACPAMPSETLAASL
DDCLRRPSATATWSMRATPVLVRGVLSLVTRSPRSLCRAVVPVLVRFVTE
TECGMALPSSSADSMTTESPKKLS
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