mRNA_F-serratus_M_contig990.21214.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Match: A0A6H5L6D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D7_9PHAE) HSP 1 Score: 243 bits (619), Expect = 1.430e-79 Identity = 129/178 (72.47%), Postives = 145/178 (81.46%), Query Frame = 1 Query: 1 MVRFIV-ASAVFSLLLGSSTVDASKKK----IYFTVYERQSDDGPRHSPLFNLPVG-GEEGQFPSKMVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDFKLKR 516 MVRFIV AS F+LLLG +TV+AS+ K + FTV+ERQSDDGPRHSPLF LPV E+ ++PSKMVLFNNDLYGSE LI+E ++GYNQGHCVETVAS GFIAECFFTYVFDDGSLTANGPFNFDA G VLPS LAVTGGTG+Y G +SAGPAE+FPSLQFDFKLK+ Sbjct: 1 MVRFIVNASVAFALLLGFATVEASRGKHEGSVEFTVFERQSDDGPRHSPLFTLPVPEAEDVEYPSKMVLFNNDLYGSEDDLIDEVQDALLGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDAEDG-VLPSFLAVTGGTGEYDGALGCVEVSAGPAEEFPSLQFDFKLKK 177
BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Match: D8LRY1_ECTSI (Potential Allene oxide cyclase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY1_ECTSI) HSP 1 Score: 180 bits (457), Expect = 8.440e-56 Identity = 89/112 (79.46%), Postives = 96/112 (85.71%), Query Frame = 1 Query: 181 MVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDFKLKR 516 MVLFNNDLYGSE LI+ED +++GYNQGHCVETVAS GFIAECFFTYVFDDGSLTANGPFNFD G VLPS LAVTGGTG+Y QG +SAGPAE+FPSLQFDFKLKR Sbjct: 1 MVLFNNDLYGSEDHLIDEDQEELIGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDVEDG-VLPSFLAVTGGTGEYDGAQGCVEVSAGPAEEFPSLQFDFKLKR 111
BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Match: A0A6N6VM22_9HYPH (Allene-oxide cyclase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VM22_9HYPH) HSP 1 Score: 53.1 bits (126), Expect = 1.120e-5 Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 1 Query: 154 GEEGQFPSKMVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDF 504 G +G ++ F N+++ ++ + + VG + G+CV TVA + + EC +T G +T GPF DA S+LA+TGG+G+YA +G+ L A A+ ++DF Sbjct: 52 GAKGDSNGDVLTFANEVF-------DKSNKEKVGTDNGYCVRTVAGKAW--ECIWTLSLAKGQITVEGPF-LDAGD-----SMLAITGGSGEYAHARGDMLLHARNAQ---GSEYDF 150
BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Match: F1ZAY6_9SPHN (Allene-oxide cyclase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 TaxID=983920 RepID=F1ZAY6_9SPHN) HSP 1 Score: 51.6 bits (122), Expect = 3.650e-5 Identity = 43/153 (28.10%), Postives = 69/153 (45.10%), Query Frame = 1 Query: 1 MVRFIVASAVFSLLLGSSTVDASKKKIYFTVYERQSDDGPRHSPLFNLPVGGEEGQFPSKMVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAAL 459 M+R ++ S +L + + AS ++ + ER D + +L GG + F N +Y + + + +G++QG+CV V G EC +T + G ++ +GP A S LAVTGGTG YAA GE + Sbjct: 1 MLRALILSPALALAVAAPAHAASPVEMKIDLVERAETD------VVSLH-GGSAADNVGDLATFTNPIYDAANQVK-------LGHDQGYCVRLVV--GKTMECHWTLFLEKGQISVDGPVYDGADS------TLAVTGGTGLYAAVHGEVKI 131 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig990.21214.1 >prot_F-serratus_M_contig990.21214.1 ID=prot_F-serratus_M_contig990.21214.1|Name=mRNA_F-serratus_M_contig990.21214.1|organism=Fucus serratus male|type=polypeptide|length=174bp MVRFIVASAVFSLLLGSSTVDASKKKIYFTVYERQSDDGPRHSPLFNLPVback to top mRNA from alignment at F-serratus_M_contig990:315859..317840- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig990.21214.1 ID=mRNA_F-serratus_M_contig990.21214.1|Name=mRNA_F-serratus_M_contig990.21214.1|organism=Fucus serratus male|type=mRNA|length=1982bp|location=Sequence derived from alignment at F-serratus_M_contig990:315859..317840- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig990:315859..317840- >mRNA_F-serratus_M_contig990.21214.1 ID=mRNA_F-serratus_M_contig990.21214.1|Name=mRNA_F-serratus_M_contig990.21214.1|organism=Fucus serratus male|type=CDS|length=1044bp|location=Sequence derived from alignment at F-serratus_M_contig990:315859..317840- (Fucus serratus male)back to top |