prot_F-serratus_M_contig990.21214.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig990.21214.1
Unique Nameprot_F-serratus_M_contig990.21214.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length174
Homology
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BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Match: A0A6H5L6D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D7_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 1.430e-79
Identity = 129/178 (72.47%), Postives = 145/178 (81.46%), Query Frame = 0 
Query:    1 MVRFIV-ASAVFSLLLGSSTVDASKKK----IYFTVYERQSDDGPRHSPLFNLPVG-GEEGQFPSKMVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDFKLKR 172
            MVRFIV AS  F+LLLG +TV+AS+ K    + FTV+ERQSDDGPRHSPLF LPV   E+ ++PSKMVLFNNDLYGSE  LI+E    ++GYNQGHCVETVAS GFIAECFFTYVFDDGSLTANGPFNFDA  G VLPS LAVTGGTG+Y    G   +SAGPAE+FPSLQFDFKLK+
Sbjct:    1 MVRFIVNASVAFALLLGFATVEASRGKHEGSVEFTVFERQSDDGPRHSPLFTLPVPEAEDVEYPSKMVLFNNDLYGSEDDLIDEVQDALLGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDAEDG-VLPSFLAVTGGTGEYDGALGCVEVSAGPAEEFPSLQFDFKLKK 177
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BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Match: D8LRY1_ECTSI (Potential Allene oxide cyclase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY1_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 8.440e-56
Identity = 89/112 (79.46%), Postives = 96/112 (85.71%), Query Frame = 0 
Query:   61 MVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDFKLKR 172
            MVLFNNDLYGSE  LI+ED  +++GYNQGHCVETVAS GFIAECFFTYVFDDGSLTANGPFNFD   G VLPS LAVTGGTG+Y   QG   +SAGPAE+FPSLQFDFKLKR
Sbjct:    1 MVLFNNDLYGSEDHLIDEDQEELIGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDVEDG-VLPSFLAVTGGTGEYDGAQGCVEVSAGPAEEFPSLQFDFKLKR 111
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BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Match: A0A6N6VM22_9HYPH (Allene-oxide cyclase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VM22_9HYPH)

HSP 1 Score: 53.1 bits (126), Expect = 1.120e-5
Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 0 
Query:   52 GEEGQFPSKMVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDF 168
            G +G     ++ F N+++       ++ + + VG + G+CV TVA + +  EC +T     G +T  GPF  DA       S+LA+TGG+G+YA  +G+  L A  A+     ++DF
Sbjct:   52 GAKGDSNGDVLTFANEVF-------DKSNKEKVGTDNGYCVRTVAGKAW--ECIWTLSLAKGQITVEGPF-LDAGD-----SMLAITGGSGEYAHARGDMLLHARNAQ---GSEYDF 150
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BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Match: F1ZAY6_9SPHN (Allene-oxide cyclase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 TaxID=983920 RepID=F1ZAY6_9SPHN)

HSP 1 Score: 51.6 bits (122), Expect = 3.650e-5
Identity = 43/153 (28.10%), Postives = 69/153 (45.10%), Query Frame = 0 
Query:    1 MVRFIVASAVFSLLLGSSTVDASKKKIYFTVYERQSDDGPRHSPLFNLPVGGEEGQFPSKMVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAAL 153
            M+R ++ S   +L + +    AS  ++   + ER   D      + +L  GG        +  F N +Y + + +        +G++QG+CV  V   G   EC +T   + G ++ +GP    A S       LAVTGGTG YAA  GE  +
Sbjct:    1 MLRALILSPALALAVAAPAHAASPVEMKIDLVERAETD------VVSLH-GGSAADNVGDLATFTNPIYDAANQVK-------LGHDQGYCVRLVV--GKTMECHWTLFLEKGQISVDGPVYDGADS------TLAVTGGTGLYAAVHGEVKI 131
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6D7_9PHAE1.430e-7972.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRY1_ECTSI8.440e-5679.46Potential Allene oxide cyclase, partial n=1 Tax=Ec... [more]
A0A6N6VM22_9HYPH1.120e-531.62Allene-oxide cyclase n=1 Tax=Parvibaculum sediment... [more]
F1ZAY6_9SPHN3.650e-528.10Allene-oxide cyclase n=1 Tax=Novosphingobium nitro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034871Allene oxide cyclase superfamilyGENE3D2.40.480.10coord: 11..172
e-value: 1.9E-10
score: 42.5
IPR034871Allene oxide cyclase superfamilySUPERFAMILY141493Allene oxide cyclase-likecoord: 41..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig990contigF-serratus_M_contig990:315859..317840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig990.21214.1mRNA_F-serratus_M_contig990.21214.1Fucus serratus malemRNAF-serratus_M_contig990 315859..317840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig990.21214.1 ID=prot_F-serratus_M_contig990.21214.1|Name=mRNA_F-serratus_M_contig990.21214.1|organism=Fucus serratus male|type=polypeptide|length=174bp
MVRFIVASAVFSLLLGSSTVDASKKKIYFTVYERQSDDGPRHSPLFNLPV
GGEEGQFPSKMVLFNNDLYGSESGLINEDHGDIVGYNQGHCVETVASEGF
IAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGE
AALSAGPAEDFPSLQFDFKLKRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034871Allene_oxi_cyc_sf