mRNA_F-serratus_M_contig990.21212.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig990.21212.1 vs. uniprot
Match: D7G2F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F0_ECTSI) HSP 1 Score: 219 bits (557), Expect = 2.740e-62 Identity = 158/359 (44.01%), Postives = 199/359 (55.43%), Query Frame = 3 Query: 762 MTDQDIKQLSEKYRKLPTGRRNPDEITVADPELAAAA-------------------AXXGEAAASAVLVEAVGSVG-VRVAAERAAAAAAGQVLIPEVPGIASVLHLELGVSKERVKRLVLKWPRLLEVSRDNLDQSVRWLLEALAVGRDDAARIVISHPPILIKSVERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFSLTNMAWKARYLAEETQMNAVDLRSVLRRCPSLFAYSVEKNLVPTLHFFWEELGATRMQXXXXXXXXXXXXXXXXXXXXXPRAQSMRAAGVTPSWHVHHTVIIFAGDDVFRRWLEDEARG 1778 M++++++QLS KY+ LP GRR PDEITVA PELAA + G+ A VG+VG VR AA++AAA AAG VLIPE P +ASVL+ +LGV KERVKRL+LKWPRLLEVS + Q V+WL E + + +D A++V++HPP+ K V NFSL NMAWKAR+L EE ++ ++++ V RCPS+ AYS E+NLVPTL FF +ELGATR Q XXXXXXXXXXXXXXXX R Q +R AG TPSW +HH V++FA D VF RWL +E G Sbjct: 1 MSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAAXXXXXXXXXXXXXXXXXXXPPSPGGQHAGG------VGAVGTVRDAADQAAARAAGIVLIPETPALASVLYAQLGVPKERVKRLLLKWPRLLEVSGYKVGQCVQWLTETVGMTKDQVAKLVLAHPPMARKVV--------------------------CSCPQLLVKSVPSNFMPKIIFFERRLGIGRDGIGPMLVRYPQLFNFSLKNMAWKARWLEEELLLDHIEVKKVFVRCPSVLAYSAERNLVPTLEFFLDELGATRQQVREAVXXXXXXXXXXXXXXXXXRLQIIRQAGFTPSWELHHRVMLFASDVVFGRWLREEPTG 327
BLAST of mRNA_F-serratus_M_contig990.21212.1 vs. uniprot
Match: A0A6H5KP85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP85_9PHAE) HSP 1 Score: 124 bits (311), Expect = 3.470e-29 Identity = 78/144 (54.17%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 717 DPTAVAHGYLRSFLEMTDQDIKQLSEKYRKLPTGRRNPDEITVADPELAA--------------------AAAXXGEAAASAVLVEAVGSVG-VRVAAERAAAAAAGQVLIPEVPGIASVLHLELGVSKERVKRLVLKWPRLLE 1085 DPTA AHG+L FL+M++++++QLS KY+ LP GRR PDEITVA PELAA A + GE A A G+VG VR AA++AAA AAG VLIPE P +ASVL+ +LGV KERVK L+LKWPRLLE Sbjct: 32 DPTAAAHGFLTEFLDMSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAAXXXXXXXXXXXXXXXXXXAGAPSPGGEHAGGA------GAVGAVREAADQAAARAAGIVLIPETPALASVLYAQLGVPKERVKMLLLKWPRLLE 169 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig990.21212.1 >prot_F-serratus_M_contig990.21212.1 ID=prot_F-serratus_M_contig990.21212.1|Name=mRNA_F-serratus_M_contig990.21212.1|organism=Fucus serratus male|type=polypeptide|length=539bp MRPRYLCTMMLAGRAACSPTSEFPPAPTSFVWTYFEPPSRHLRPESLCRDback to top mRNA from alignment at F-serratus_M_contig990:207965..253699+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig990.21212.1 ID=mRNA_F-serratus_M_contig990.21212.1|Name=mRNA_F-serratus_M_contig990.21212.1|organism=Fucus serratus male|type=mRNA|length=45735bp|location=Sequence derived from alignment at F-serratus_M_contig990:207965..253699+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig990:207965..253699+ >mRNA_F-serratus_M_contig990.21212.1 ID=mRNA_F-serratus_M_contig990.21212.1|Name=mRNA_F-serratus_M_contig990.21212.1|organism=Fucus serratus male|type=CDS|length=3234bp|location=Sequence derived from alignment at F-serratus_M_contig990:207965..253699+ (Fucus serratus male)back to top |