mRNA_F-serratus_M_contig98.21093.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig98.21093.1 vs. uniprot
Match: D8LSX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX4_ECTSI) HSP 1 Score: 559 bits (1441), Expect = 3.550e-186 Identity = 306/524 (58.40%), Postives = 369/524 (70.42%), Query Frame = 2 Query: 410 LFPRREVMQLAKDRIRAWCAEENRREQEGVSLGGKIPSEDRPRRTWRAYEFVQLPARNRTLDSEVLGMNVGLAPNDTRLEVIVDYGSKDEAPEVGSRLLDMVADVSREANEVFGYEDDASTGGKNLGPWKKAGNVNSWRKWLHV-ESDEPLPESAVTLFRVVQANWASPEKIAAAMNFTVSWSKARHEESATDPTVPLRSVEVLHSAVHPHVLKIVETFASADALLDHFHRHYADFLEGVFDFRAAVNPTIQAYTPLDASVRPSLSARLPSGAMVPLVAIGGTEKETETGKKEGRRAPSMDVIFEGLKLGVRHVVLEAGSAGVEEAVEALRGALAFGVLRRSDLFVTLLVGEDRARLSGGAGIAAAMRETLACDALDSSRDG--EGQEGRQRLLENVDALIVARDSGRLFDDNGSFLELWDEAREAAAC-------FPAPLPEIDGDAAQARPCPLAR---------------------------------------HLGIGGHGPRVAEKLSLLAETQALAGS 1834 +FP+RE +Q KDR++AWCAEENRREQE VSL G EDRP R W+AYEF+ LP+RNRTLDSEVLGMNVG + NDTRLEV VD+ +DEA EVG RLLDM+ADVSRE NEVFGY DDA TGG+ LGPWKK+G+VNSWRKWL + + ++PLPESAVT+FR VQANWA P KIAAAMNFTV WS AR EES DPT PLR VEVLHSA+HPHV+KI ETFAS+DA+LDHFHR+Y +L GVF+FRAAVNPT+QAYTPL+AS+RP LSA LP+GA+VPLVAIGG E +G P+M ++ EGLKLGVRH VLE GS+GV+EAVE L+ ALAFGV++R LFVT++VGE + ++GG GIAAA+ ETLA +D DG E RLL++VDAL++AR+SG FDD+ FLE+WDEA +AAA PA E G A P HLG+GGHG +VA++L+LL + AG+ Sbjct: 1 MFPKREAVQQLKDRLQAWCAEENRREQEDVSLPGGTSREDRPPRRWQAYEFIPLPSRNRTLDSEVLGMNVGRSVNDTRLEVTVDFEKEDEALEVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHRNYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPTGAIVPLVAIGGAE--------DGVSPPTM-IVLEGLKLGVRHFVLEVGSSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVD---DGGIETDGTATRLLDSVDALVLARESGEYFDDDRLFLEMWDEAHQAAASPPRESTGLPAVPTEQTGLDTPADDDPFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGVGGHGSKVADRLALLVDQSPAAGA 512
BLAST of mRNA_F-serratus_M_contig98.21093.1 vs. uniprot
Match: A0A6H5L373_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L373_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 1.270e-18 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 1903 LPDLFFGDLRAGAGAATAKTIEFCRERGVQAFSMRYIGGQGGKEAWRGATAAADYEHEDIT 2085 LP L+FGDLRAG GAAT TIE CRERGVQAFS+ Y GG+G +EA +GA AAADYEHED++ Sbjct: 157 LPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEAGKGAAAAADYEHEDVS 217 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig98.21093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig98.21093.1 >prot_F-serratus_M_contig98.21093.1 ID=prot_F-serratus_M_contig98.21093.1|Name=mRNA_F-serratus_M_contig98.21093.1|organism=Fucus serratus male|type=polypeptide|length=609bp MVAAGCWWVPLPLKALVSVLIFLLGPPPARSFFSPPALYEYSSRSTQLTCback to top mRNA from alignment at F-serratus_M_contig98:338778..362097- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig98.21093.1 ID=mRNA_F-serratus_M_contig98.21093.1|Name=mRNA_F-serratus_M_contig98.21093.1|organism=Fucus serratus male|type=mRNA|length=23320bp|location=Sequence derived from alignment at F-serratus_M_contig98:338778..362097- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig98:338778..362097- >mRNA_F-serratus_M_contig98.21093.1 ID=mRNA_F-serratus_M_contig98.21093.1|Name=mRNA_F-serratus_M_contig98.21093.1|organism=Fucus serratus male|type=CDS|length=3654bp|location=Sequence derived from alignment at F-serratus_M_contig98:338778..362097- (Fucus serratus male)back to top |