prot_F-serratus_M_contig98.21093.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig98.21093.1
Unique Nameprot_F-serratus_M_contig98.21093.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length609
Homology
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BLAST of mRNA_F-serratus_M_contig98.21093.1 vs. uniprot
Match: D8LSX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX4_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 4.400e-190
Identity = 306/524 (58.40%), Postives = 369/524 (70.42%), Query Frame = 0 
Query:  127 LFPRREVMQLAKDRIRAWCAEENRREQEGVSLGGKIPSEDRPRRTWRAYEFVQLPARNRTLDSEVLGMNVGLAPNDTRLEVIVDYGSKDEAPEVGSRLLDMVADVSREANEVFGYEDDASTGGKNLGPWKKAGNVNSWRKWLHV-ESDEPLPESAVTLFRVVQANWASPEKIAAAMNFTVSWSKARHEESATDPTVPLRSVEVLHSAVHPHVLKIVETFASADALLDHFHRHYADFLEGVFDFRAAVNPTIQAYTPLDASVRPSLSARLPSGAMVPLVAIGGTEKETETGKKEGRRAPSMDVIFEGLKLGVRHVVLEAGSAGVEEAVEALRGALAFGVLRRSDLFVTLLVGEDRARLSGGAGIAAAMRETLACDALDSSRDG--EGQEGRQRLLENVDALIVARDSGRLFDDNGSFLELWDEAREAAAC-------FPAPLPEIDGDAAQARPCPLAR---------------------------------------HLGIGGHGPRVAEKLSLLAETQALAGS 601
            +FP+RE +Q  KDR++AWCAEENRREQE VSL G    EDRP R W+AYEF+ LP+RNRTLDSEVLGMNVG + NDTRLEV VD+  +DEA EVG RLLDM+ADVSRE NEVFGY DDA TGG+ LGPWKK+G+VNSWRKWL + + ++PLPESAVT+FR VQANWA P KIAAAMNFTV WS AR EES  DPT PLR VEVLHSA+HPHV+KI ETFAS+DA+LDHFHR+Y  +L GVF+FRAAVNPT+QAYTPL+AS+RP LSA LP+GA+VPLVAIGG E        +G   P+M ++ EGLKLGVRH VLE GS+GV+EAVE L+ ALAFGV++R  LFVT++VGE  + ++GG GIAAA+ ETLA   +D   DG  E      RLL++VDAL++AR+SG  FDD+  FLE+WDEA +AAA         PA   E  G    A   P                                          HLG+GGHG +VA++L+LL +    AG+
Sbjct:    1 MFPKREAVQQLKDRLQAWCAEENRREQEDVSLPGGTSREDRPPRRWQAYEFIPLPSRNRTLDSEVLGMNVGRSVNDTRLEVTVDFEKEDEALEVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHRNYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPTGAIVPLVAIGGAE--------DGVSPPTM-IVLEGLKLGVRHFVLEVGSSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVD---DGGIETDGTATRLLDSVDALVLARESGEYFDDDRLFLEMWDEAHQAAASPPRESTGLPAVPTEQTGLDTPADDDPFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGVGGHGSKVADRLALLVDQSPAAGA 512
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig98.21093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSX4_ECTSI4.400e-19058.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..608
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.827
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig98contigF-serratus_M_contig98:341604..362066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig98.21093.1mRNA_F-serratus_M_contig98.21093.1Fucus serratus malemRNAF-serratus_M_contig98 338778..362097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig98.21093.1 ID=prot_F-serratus_M_contig98.21093.1|Name=mRNA_F-serratus_M_contig98.21093.1|organism=Fucus serratus male|type=polypeptide|length=609bp
MVAAGCWWVPLPLKALVSVLIFLLGPPPARSFFSPPALYEYSSRSTQLTC
SPGSFTGNGDSFMIPAQRQVIATPTHRRTKGEATMERPRGQFRRLTKPKF
DRRNPSAVGEVAIPGLQEVCVAAQTQLFPRREVMQLAKDRIRAWCAEENR
REQEGVSLGGKIPSEDRPRRTWRAYEFVQLPARNRTLDSEVLGMNVGLAP
NDTRLEVIVDYGSKDEAPEVGSRLLDMVADVSREANEVFGYEDDASTGGK
NLGPWKKAGNVNSWRKWLHVESDEPLPESAVTLFRVVQANWASPEKIAAA
MNFTVSWSKARHEESATDPTVPLRSVEVLHSAVHPHVLKIVETFASADAL
LDHFHRHYADFLEGVFDFRAAVNPTIQAYTPLDASVRPSLSARLPSGAMV
PLVAIGGTEKETETGKKEGRRAPSMDVIFEGLKLGVRHVVLEAGSAGVEE
AVEALRGALAFGVLRRSDLFVTLLVGEDRARLSGGAGIAAAMRETLACDA
LDSSRDGEGQEGRQRLLENVDALIVARDSGRLFDDNGSFLELWDEAREAA
ACFPAPLPEIDGDAAQARPCPLARHLGIGGHGPRVAEKLSLLAETQALAG
SVRNLSHR*
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