mRNA_F-serratus_M_contig943.20801.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: D8LCY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY6_ECTSI) HSP 1 Score: 175 bits (443), Expect = 4.040e-41 Identity = 97/202 (48.02%), Postives = 125/202 (61.88%), Query Frame = 2 Query: 68 GCFFLMLDGAVEQKR-----IVMVDSDTPGIRGKLAVLAETMVDS-------RQMKHMKVINGGV-KQRARKWRSMKICLLCGKGNTRPKALLSCGFCPRSFHAECLDEMAGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNRQLEALGYFSEQSYWIRCEACVEGGRQLQM 634 G F + G+V KR IVM+ PG RG+LA++ D+ R I+GG+ K R+W+SM +C LCG+G R + L SCG CPRS+H CL E +G + ++ +FVCPQHRCV CT+A AA GLLFRCQ C A+CEDCLP DEVE L RN QLEALGY ++Q+YWIRC+ CV G Q ++ Sbjct: 1597 GLFGGGVHGSVLGKRARKSCIVMLRDGNPGGRGRLAIVTNAPKDATAAAAAARPGSGGSSIDGGMPKPYHRQWQSMAVCALCGEGPDRSRPLTSCGLCPRSYHGGCL-EASGVDYDATA-GEGVFVCPQHRCVACTKA-AAGRGLLFRCQACAKAYCEDCLPGDEVEPLARNPQLEALGYLAKQAYWIRCQPCVNGELQAKL 1795
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: A0A6H5KTV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV3_9PHAE) HSP 1 Score: 169 bits (429), Expect = 2.110e-39 Identity = 92/195 (47.18%), Postives = 120/195 (61.54%), Query Frame = 2 Query: 92 GAVEQKR-----IVMVDSDTPGIRGKLAVLAETMVDS--------RQMKHMKVINGG-VKQRARKWRSMKICLLCGKGNTRPKALLSCGFCPRSFHAECLDEMAGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNRQLEALGYFSEQSYWIRCEACVEGGRQLQM 634 G+V KR IVM+ PG RG+L ++ + D+ R I+GG K R+W+SM +C LCG+ R + L+ C CPRS+H +CL E +G + ++ +FVCPQHRCV CT+A AA GLLFRCQ C A+CEDCLPEDEVE L RN QLEALGY ++Q+YWIRC CV G Q ++ Sbjct: 1620 GSVLGKRARKSCIVMLGDGNPGRRGRLTIVTDAPQDTTAPAAAAPRPGSGGSSIDGGRPKPYHRQWQSMAVCTLCGEDPDRSRPLVCCRLCPRSYHGDCL-EASGVDYDATA-GEGVFVCPQHRCVACTKA-AAGRGLLFRCQACAKAYCEDCLPEDEVEPLARNPQLEALGYLAKQAYWIRCRPCVNGELQAKL 1811
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: A0A7S1XPX0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPX0_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.570e-31 Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 2 Query: 311 CGFCPRSFHAECLDEMAGA----NVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNRQLEALGYFSEQSYWIRCEACVEGGRQ 625 C FCPR FHA CL + + K S + VCPQH+C C R+T+A+GGLLFRC +C ++ CEDCLPED++E LGR+ +EA GY S+QSYWIRC +CVEGGRQ Sbjct: 326 CSFCPRIFHASCLAAFSASIGEPKRKKSEGGNQPLVCPQHKCTSCFRSTSASGGLLFRCVSCPHSLCEDCLPEDDIEGLGRSAHMEAQGYISKQSYWIRCPSCVEGGRQ 434
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: A0A7R9Y8C0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8C0_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.940e-31 Identity = 62/124 (50.00%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 311 CGFCPRSFHAECLDEM-------AGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNRQLEALGYFSEQSYWIRCEACVEGGRQLQMDDET-DPSP 658 C FCPR +H ECL AGA ++S+P VCPQH+C C R TAAAGGLLFRC +C A CEDCLPE+E+E LGR+ +E GY +QSYWI+C +C+ GR+ ++ E +P P Sbjct: 1 CTFCPRVYHDECLKAFVATRLRDAGAAAQSSTP----VVCPQHKCTSCFRTTAAAGGLLFRCISCPIALCEDCLPEEEIEGLGRSAYMEQTGYHGKQSYWIKCNSCLAAGREPAIEPERKEPEP 120
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: K8Z8U9_NANGC (Swi snf-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 19 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8U9_NANGC) HSP 1 Score: 136 bits (342), Expect = 5.320e-29 Identity = 74/189 (39.15%), Postives = 104/189 (55.03%), Query Frame = 2 Query: 101 EQKRIVMVDSDTPGIRGKLAVLAETMVDSRQMKHMKVI-NGGVKQRA---------RKWRSMKICLLCGKG----NTRPKALLSCGFCPRSFHAECLDEMAGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNRQLEALGYFSEQSYWIRCEACVEGGRQ 625 ++R+VMVD G + VLA+ + S++ + +GG K+ R W C LC K ++ CG+CP+ FH CL V+ + P + M VCP H C GC R TAAAGGLLFRC C ++CEDCL ++ +ESLGR + LEALGYF++Q+Y+IRC C+ G + Sbjct: 969 RKQRLVMVDGRGSGYGRSVPVLADEYLQSQKDAAAEATGSGGSKEDTTSSGPRRLRRDWDHESGCFLCQKALIADPSKKGQNFKCGYCPKVFHTSCLSNFTKKAVEGAGPANIM-VCPHHNCHGCRRTTAAAGGLLFRCVECPRSYCEDCLEDENIESLGRWKPLEALGYFTKQAYFIRCPTCLNSGEE 1156
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: W7TYI9_9STRA (Swi snf matrix actin dependent regulator of subfamily member 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYI9_9STRA) HSP 1 Score: 129 bits (325), Expect = 8.350e-27 Identity = 72/180 (40.00%), Postives = 100/180 (55.56%), Query Frame = 2 Query: 101 EQKRIVMVDSDTPGIRGKLAVLAETMVDSRQMKHMKVI-NGGVKQRA---------RKWRSMKICLLCGKG----NTRPKALLSCGFCPRSFHAECLDEMAGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNRQLEALGYFSEQSYWIRC 598 ++R+VMVD G + VLA+ + S++ + +GG K+ R W C LC K ++ CG+CP+ FH CL V+ + P + M VCP H C GC R TAAAGGLLFRC C ++CEDCL ++ +ESLGR + LEALGYF++Q+Y+IRC Sbjct: 2062 RKQRLVMVDGRGSGYGRSVPVLADEYLQSQKDAAAEATGSGGSKEDTTSSGPRRLRRDWDHESGCFLCQKALIADPSKKGQNFKCGYCPKVFHTSCLSNFTKKAVEGAGPANIM-VCPHHNCHGCRRTTAAAGGLLFRCVECPRSYCEDCLEDENIESLGRWKPLEALGYFTKQAYFIRC 2240
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: K5VZS7_PHACS (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5VZS7_PHACS) HSP 1 Score: 113 bits (283), Expect = 2.250e-22 Identity = 71/181 (39.23%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 86 LDGAVEQKRIVMVDSDTPGIRGKLAVLAETMVDSRQMKHMKVINGGVKQRARK---WRSMKICLLCGKGNTRPKALLSCGFCPRSFHAECLDEMAGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNRQLEALGYFSEQ--SYWIRCEACVE 613 L Q RIV+VD VL+E + + + +G +R R+ W C+ C G L C CPR FHAEC K + ++M VCPQHRC GC R TA AG +LFRCQTC NAFCEDCLP E+ ++G L F E +Y+IRC AC E Sbjct: 408 LQKRARQTRIVVVDG--------FEVLSECLAPLQHELKAALADGPAAKRKRRQFDWEDW--CIYCRDGGE----LTLCNSCPRVFHAEC-----HGLTKAKAAKASMLVCPQHRCCGCDRNTADAGNMLFRCQTCTNAFCEDCLPPGEIGAVGDTLPEFVLRGFEEMPSAYFIRCHACQE 569
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: UPI00044180E2 (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI00044180E2) HSP 1 Score: 105 bits (261), Expect = 2.390e-19 Identity = 61/157 (38.85%), Postives = 84/157 (53.50%), Query Frame = 2 Query: 146 RGKLAVLAETMVDSRQMKHMKVINGGVKQRAR-KWRSMKICLLCGKGNTRPKALLSCGFCPRSFHAECLDEMAGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNR-QLEALGY-FSEQSYWIRCEAC 607 +GK ++ + +R + KQ+ + KW S C C G L+ CG CPR FH EC + A +K + +C QH CV C R+T AGG+LFRCQTC AFCEDCLPE +++++G + LGY FS +Y+IRC C Sbjct: 823 KGKRVIMDGIEIPARTVPAAAPAEPKAKQKGKAKWDSEDWCHYCRDGGE----LVCCGRCPRVFHKECRG-LTAAQLKRNFA----IICEQHSCVVCNRSTGDAGGMLFRCQTCPQAFCEDCLPEGDIDAVGETLPEFLLLGYGFSPSAYYIRCHDC 970
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: A0A0L0HA78_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HA78_SPIPD) HSP 1 Score: 104 bits (260), Expect = 3.120e-19 Identity = 68/177 (38.42%), Postives = 94/177 (53.11%), Query Frame = 2 Query: 98 VEQKRIVMVDSDTPGIRGKLAVLAETM-VDSRQMKHMKVINGGV--KQRARKWRSMKICLLCGKGNTRPKALLSCGFCPRSFHAECLDEMAGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNRQLEALGYFSE--QSYWIRCEACVE 613 V + R+VMVD AVL ET+ D + + N + K+R RK+ ++C C + + K LL C CPRS+H +C+ K S+ + CPQH CV C R T AGG+LFRCQ+C NAFCEDCL DE+ +G L F + Q+Y+IRC C++ Sbjct: 693 VREDRVVMVDGH--------AVLKETVGCDMWEARSTFSKNAVIEKKRRRRKFAHEEVCHACSDEDDQSK-LLGCTLCPRSYHPKCV-----GMTKASAKQLVTWSCPQHLCVECLRKTGDAGGMLFRCQSCSNAFCEDCLDFDEIFPVGDVLPEFLLLGFPKVGQAYYIRCTECLD 855
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Match: A0A0C2WXS9_AMAMK (Uncharacterized protein n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WXS9_AMAMK) HSP 1 Score: 103 bits (256), Expect = 9.190e-19 Identity = 57/131 (43.51%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 224 VKQRARKWRSMKICLLCGKGNTRPKALLSCGFCPRSFHAECLDEMAGANVKTSSPNSAMFVCPQHRCVGCTRATAAAGGLLFRCQTCVNAFCEDCLPEDEVESLGRNR-QLEALGYFSEQS-YWIRCEACV 610 +K+ K+ S + C +C G L+ C CPR FHA C K + SA C QH C C R T+ AGGLLFRCQTC AFCEDCLP D++E +G +LE LGY ++++ Y+IRC C+ Sbjct: 817 LKRERAKFESEEWCNICRDGGD----LVLCDVCPRVFHASCY-----GITKRTIAFSARITCSQHSCAVCERKTSDAGGLLFRCQTCHQAFCEDCLPFDDIEPVGETLPELELLGYGAQKAAYFIRCHDCL 938 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig943.20801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig943.20801.1 >prot_F-serratus_M_contig943.20801.1 ID=prot_F-serratus_M_contig943.20801.1|Name=mRNA_F-serratus_M_contig943.20801.1|organism=Fucus serratus male|type=polypeptide|length=252bp MLDGAVEQKRIVMVDSDTPGIRGKLAVLAETMVDSRQMKHMKVINGGVKQback to top mRNA from alignment at F-serratus_M_contig943:323612..328721- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig943.20801.1 ID=mRNA_F-serratus_M_contig943.20801.1|Name=mRNA_F-serratus_M_contig943.20801.1|organism=Fucus serratus male|type=mRNA|length=5110bp|location=Sequence derived from alignment at F-serratus_M_contig943:323612..328721- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig943:323612..328721- >mRNA_F-serratus_M_contig943.20801.1 ID=mRNA_F-serratus_M_contig943.20801.1|Name=mRNA_F-serratus_M_contig943.20801.1|organism=Fucus serratus male|type=CDS|length=1512bp|location=Sequence derived from alignment at F-serratus_M_contig943:323612..328721- (Fucus serratus male)back to top |