mRNA_F-serratus_M_contig942.20788.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE) HSP 1 Score: 184 bits (466), Expect = 9.670e-54 Identity = 99/231 (42.86%), Postives = 142/231 (61.47%), Query Frame = 1 Query: 22 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 + EE+ +P+RE +G+LMW AT TR +IA A RAVAR+C +P H +A + I Y++ T + GI +G G GL ME + D+D+ + RRS SG +M +G ISW SR Q+ T T+EAEY +L++V+K+VLFLRQV FM P + + VFEDN+GAI+L N ++ +KH V+HH + + + + YV S QHA LTK L F H F+++V Sbjct: 63 QDEEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKALH-FGDFEFHRNFVMSV 292
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 179 bits (455), Expect = 3.370e-52 Identity = 96/231 (41.56%), Postives = 144/231 (62.34%), Query Frame = 1 Query: 22 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 + EE+ +P+RE +G+LMW AT TR DIA AVRAVAR+C +P H +A + I Y++ T + GI + G GL ME + D+D+ + RRS SG ++M G +SW SR Q+ T T+EAEY +L++V+K+VLFLRQV+ F+ P + + V EDN+GAI+L N ++ +KHI V+HH R+ + + + +V S QHA LTK L C H +++++ Sbjct: 24 QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDFEC-HRNYVMSM 253
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 183 bits (465), Expect = 4.790e-52 Identity = 99/231 (42.86%), Postives = 144/231 (62.34%), Query Frame = 1 Query: 22 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 + EE+ +P+RE +G+LMW AT TR DIA AVRAVAR+C +P H +A + I Y++ T + GI + G GL ME + D+D+ + RRS SG ++M G ISW SR Q+ T T+EAEY +L++V+K+VLFLRQV FM P + + VFEDN+GAI+L N ++ +KHI V+HH R+ + + + +V S QHA LTK L F H +++++ Sbjct: 208 QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALH-AGDFEFHRNYVMSM 437
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 184 bits (466), Expect = 5.710e-52 Identity = 103/238 (43.28%), Postives = 145/238 (60.92%), Query Frame = 1 Query: 4 VKRFDVEKEEIK-KFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 VK D + +E+ +FP+RE VG+LMW AT TR DIA AVRAVAR+C +P H A + I Y T +GI++ G G ++ Y D+DF + RRS SG ++ GA+SW SR Q+ T T+EAEY AL +VVK++LFLRQ+ FM P + + + VFEDN+GAI+L N ++ +KHI V+HH R+ + + + V +V S Q A LTK L F H F++N+ Sbjct: 225 VKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPK-DAFESHRDFVMNL 461
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.240e-51 Identity = 96/231 (41.56%), Postives = 142/231 (61.47%), Query Frame = 1 Query: 22 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 E E P+RE VG+LMW AT TR DIA AVRAVAR+C +P H KA + I Y+ T GI + G G+ M+ + D+D+ + RRS SG ++M G ++W SR Q+ T T+EAEY A+++V+K+VLFLRQV FM P + + VFEDN+GAI+++ N + +KHI V+HH R+ + + + + +V ++ QHA LTK + + F H F++N+ Sbjct: 146 ENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISK-ESFALHRDFVMNL 375
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ5_9PHAE) HSP 1 Score: 177 bits (450), Expect = 2.180e-51 Identity = 100/238 (42.02%), Postives = 142/238 (59.66%), Query Frame = 1 Query: 4 VKRFDVEKEEIKK-FPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 VK D + +E+ FP+RE VG+LMW AT TR IA AVRAVAR+C +P H A + I Y T +GI++ G G ++ Y D+DF + RRS SG ++ GA+SW S Q+ T T+EAEY AL +VVK++LFLRQ+ FM P + + + +FEDN+GAI+L N ++ +KHI V+HH R+ + + V +V S +Q A LTK L F H F++N+ Sbjct: 55 VKLSDFDADEVATDFPFRELVGSLMWLATQTRPAIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSITQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGIPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVEREEFSVMHVPSPNQRADCLTKSLSK-DAFESHRDFVMNL 291
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE) HSP 1 Score: 177 bits (450), Expect = 4.780e-51 Identity = 96/231 (41.56%), Postives = 139/231 (60.17%), Query Frame = 1 Query: 22 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 E E P+RE VG+LMW AT TR DIA AVRAVAR+C +P H KA + I Y+ T GI + G G+ M+ + D+D+ + RRS SG ++M G ++W SR Q+ T T+EAEY A+++V+K+VLFLRQV FM P + + VFEDN+GAI++ N + +KHI V+HH R+ + + + + V + QHA LTK + + F H F++N+ Sbjct: 91 ENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISK-ESFALHRDFVMNL 320
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE) HSP 1 Score: 177 bits (449), Expect = 6.570e-51 Identity = 100/238 (42.02%), Postives = 142/238 (59.66%), Query Frame = 1 Query: 4 VKRFDVEKEEIK-KFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 VK D + +E+ +FP+RE VG+LMW AT TR DIA AVRAVAR+C +P H A + I Y T +GI++ G G ++ Y D+DF + RRS SG ++ GA+SW SR Q+ T T+EAEY AL +VVK++LFLRQ+ F P + + + VFED +G I+L N ++ +KHI V+HH R+ + + + V +V S Q A LTK L F H F++N+ Sbjct: 83 VKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFTLPQVGMPCIPVFEDIQGVIQLAQNPISNSNSKHINVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSK-DAFESHRDFVMNL 319
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KPF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF9_9PHAE) HSP 1 Score: 178 bits (451), Expect = 7.370e-51 Identity = 102/234 (43.59%), Postives = 139/234 (59.40%), Query Frame = 1 Query: 13 FDVEKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 FD + EE FP+RE VG+LMW AT TR DIA AVRAVAR+C +P H A + I Y T GI++ G G ++ Y D+DF + RRS SG ++ G +SW SR Q+ T T+EA Y AL +VVK++LFLRQV FM P + + + VFEDN+GAI+L N ++ +KHI V+HH R+ + + + V +V S Q A LTK L F H F++N+ Sbjct: 119 FDAD-EEATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKRVHWDAAMGILGYAKRTSYMGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAGYVALGDVVKEILFLRQVWRFMLPKVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKRLPK-DAFESHRDFVMNL 350
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.130e-50 Identity = 99/231 (42.86%), Postives = 144/231 (62.34%), Query Frame = 1 Query: 22 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 711 + EE+ +P+RE +G+LMW AT TR DIA AVRAVAR+C +P H +A + I Y++ T + GI + G GL ME + D+D+ + RRS SG ++M G ISW SR Q+ T T+EAEY +L++V+K+VLFLRQV FM P + + VFEDN+GAI+L N ++ +KHI V+HH R+ + + + +V S QHA LTK L F H +++++ Sbjct: 382 QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALH-AGDFEFHRNYVMSM 611 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig942.20788.1 >prot_F-serratus_M_contig942.20788.1 ID=prot_F-serratus_M_contig942.20788.1|Name=mRNA_F-serratus_M_contig942.20788.1|organism=Fucus serratus male|type=polypeptide|length=239bp MVKRFDVEKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGback to top mRNA from alignment at F-serratus_M_contig942:160773..161489+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig942.20788.1 ID=mRNA_F-serratus_M_contig942.20788.1|Name=mRNA_F-serratus_M_contig942.20788.1|organism=Fucus serratus male|type=mRNA|length=717bp|location=Sequence derived from alignment at F-serratus_M_contig942:160773..161489+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig942:160773..161489+ >mRNA_F-serratus_M_contig942.20788.1 ID=mRNA_F-serratus_M_contig942.20788.1|Name=mRNA_F-serratus_M_contig942.20788.1|organism=Fucus serratus male|type=CDS|length=1434bp|location=Sequence derived from alignment at F-serratus_M_contig942:160773..161489+ (Fucus serratus male)back to top |