prot_F-serratus_M_contig942.20788.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig942.20788.1
Unique Nameprot_F-serratus_M_contig942.20788.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length239
Homology
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 9.670e-54
Identity = 99/231 (42.86%), Postives = 142/231 (61.47%), Query Frame = 0
Query:    8 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            + EE+  +P+RE +G+LMW AT TR +IA A RAVAR+C +P   H +A + I  Y++ T + GI +G G   GL ME + D+D+ +    RRS SG  +M  +G ISW SR Q+  T  T+EAEY +L++V+K+VLFLRQV  FM P   +  + VFEDN+GAI+L  N  ++  +KH  V+HH   +    + + + YV S  QHA  LTK L     F  H  F+++V
Sbjct:   63 QDEEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKALH-FGDFEFHRNFVMSV 292          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 3.370e-52
Identity = 96/231 (41.56%), Postives = 144/231 (62.34%), Query Frame = 0
Query:    8 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            + EE+  +P+RE +G+LMW AT TR DIA AVRAVAR+C +P   H +A + I  Y++ T + GI +  G   GL ME + D+D+ +    RRS SG ++M   G +SW SR Q+  T  T+EAEY +L++V+K+VLFLRQV+ F+ P   +  + V EDN+GAI+L  N  ++  +KHI V+HH  R+    + + + +V S  QHA  LTK L      C H  +++++
Sbjct:   24 QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDFEC-HRNYVMSM 253          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.790e-52
Identity = 99/231 (42.86%), Postives = 144/231 (62.34%), Query Frame = 0
Query:    8 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            + EE+  +P+RE +G+LMW AT TR DIA AVRAVAR+C +P   H +A + I  Y++ T + GI +  G   GL ME + D+D+ +    RRS SG ++M   G ISW SR Q+  T  T+EAEY +L++V+K+VLFLRQV  FM P   +  + VFEDN+GAI+L  N  ++  +KHI V+HH  R+    + + + +V S  QHA  LTK L     F  H  +++++
Sbjct:  208 QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALH-AGDFEFHRNYVMSM 437          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 5.710e-52
Identity = 103/238 (43.28%), Postives = 145/238 (60.92%), Query Frame = 0
Query:    2 VKRFDVEKEEIK-KFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            VK  D + +E+  +FP+RE VG+LMW AT TR DIA AVRAVAR+C +P   H  A + I  Y   T  +GI++  G   G  ++ Y D+DF +    RRS SG ++    GA+SW SR Q+  T  T+EAEY AL +VVK++LFLRQ+  FM P + +  + VFEDN+GAI+L  N  ++  +KHI V+HH  R+  + + + V +V S  Q A  LTK L     F  H  F++N+
Sbjct:  225 VKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPK-DAFESHRDFVMNL 461          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.240e-51
Identity = 96/231 (41.56%), Postives = 142/231 (61.47%), Query Frame = 0
Query:    8 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            E E     P+RE VG+LMW AT TR DIA AVRAVAR+C +P   H KA + I  Y+  T   GI +  G   G+ M+ + D+D+ +    RRS SG ++M   G ++W SR Q+  T  T+EAEY A+++V+K+VLFLRQV  FM P   +  + VFEDN+GAI+++ N   +  +KHI V+HH  R+  + + + + +V ++ QHA  LTK +   + F  H  F++N+
Sbjct:  146 ENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISK-ESFALHRDFVMNL 375          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ5_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.180e-51
Identity = 100/238 (42.02%), Postives = 142/238 (59.66%), Query Frame = 0
Query:    2 VKRFDVEKEEIKK-FPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            VK  D + +E+   FP+RE VG+LMW AT TR  IA AVRAVAR+C +P   H  A + I  Y   T  +GI++  G   G  ++ Y D+DF +    RRS SG ++    GA+SW S  Q+  T  T+EAEY AL +VVK++LFLRQ+  FM P + +  + +FEDN+GAI+L  N  ++  +KHI V+HH  R+  + +   V +V S +Q A  LTK L     F  H  F++N+
Sbjct:   55 VKLSDFDADEVATDFPFRELVGSLMWLATQTRPAIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSITQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGIPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVEREEFSVMHVPSPNQRADCLTKSLSK-DAFESHRDFVMNL 291          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 4.780e-51
Identity = 96/231 (41.56%), Postives = 139/231 (60.17%), Query Frame = 0
Query:    8 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            E E     P+RE VG+LMW AT TR DIA AVRAVAR+C +P   H KA + I  Y+  T   GI +  G   G+ M+ + D+D+ +    RRS SG ++M   G ++W SR Q+  T  T+EAEY A+++V+K+VLFLRQV  FM P   +  + VFEDN+GAI++  N   +  +KHI V+HH  R+  + + + +  V +  QHA  LTK +   + F  H  F++N+
Sbjct:   91 ENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISK-ESFALHRDFVMNL 320          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 6.570e-51
Identity = 100/238 (42.02%), Postives = 142/238 (59.66%), Query Frame = 0
Query:    2 VKRFDVEKEEIK-KFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            VK  D + +E+  +FP+RE VG+LMW AT TR DIA AVRAVAR+C +P   H  A + I  Y   T  +GI++  G   G  ++ Y D+DF +    RRS SG ++    GA+SW SR Q+  T  T+EAEY AL +VVK++LFLRQ+  F  P + +  + VFED +G I+L  N  ++  +KHI V+HH  R+  + + + V +V S  Q A  LTK L     F  H  F++N+
Sbjct:   83 VKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFTLPQVGMPCIPVFEDIQGVIQLAQNPISNSNSKHINVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSK-DAFESHRDFVMNL 319          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KPF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF9_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 7.370e-51
Identity = 102/234 (43.59%), Postives = 139/234 (59.40%), Query Frame = 0
Query:    5 FDVEKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            FD + EE   FP+RE VG+LMW AT TR DIA AVRAVAR+C +P   H  A + I  Y   T   GI++  G   G  ++ Y D+DF +    RRS SG ++    G +SW SR Q+  T  T+EA Y AL +VVK++LFLRQV  FM P + +  + VFEDN+GAI+L  N  ++  +KHI V+HH  R+  + + + V +V S  Q A  LTK L     F  H  F++N+
Sbjct:  119 FDAD-EEATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKRVHWDAAMGILGYAKRTSYMGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAGYVALGDVVKEILFLRQVWRFMLPKVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKRLPK-DAFESHRDFVMNL 350          
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.130e-50
Identity = 99/231 (42.86%), Postives = 144/231 (62.34%), Query Frame = 0
Query:    8 EKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPGPAHKKAVVKIFQYLLHTKEWGIAYG-GQGCGLCMEAYTDSDFVACLGTRRSDSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQRVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNV 237
            + EE+  +P+RE +G+LMW AT TR DIA AVRAVAR+C +P   H +A + I  Y++ T + GI +  G   GL ME + D+D+ +    RRS SG ++M   G ISW SR Q+  T  T+EAEY +L++V+K+VLFLRQV  FM P   +  + VFEDN+GAI+L  N  ++  +KHI V+HH  R+    + + + +V S  QHA  LTK L     F  H  +++++
Sbjct:  382 QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALH-AGDFEFHRNYVMSM 611          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig942.20788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD60_9PHAE9.670e-5442.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTK6_9PHAE3.370e-5241.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE4.790e-5242.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE5.710e-5243.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE1.240e-5141.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSZ5_9PHAE2.180e-5142.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE4.780e-5141.56Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRB4_9PHAE6.570e-5142.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPF9_9PHAE7.370e-5143.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB8_9PHAE1.130e-5042.86Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 17..197
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 17..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig942contigF-serratus_M_contig942:160773..161489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig942.20788.1mRNA_F-serratus_M_contig942.20788.1Fucus serratus malemRNAF-serratus_M_contig942 160773..161489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig942.20788.1 ID=prot_F-serratus_M_contig942.20788.1|Name=mRNA_F-serratus_M_contig942.20788.1|organism=Fucus serratus male|type=polypeptide|length=239bp
MVKRFDVEKEEIKKFPYREAVGALMWTATMTRSDIACAVRAVARFCENPG
PAHKKAVVKIFQYLLHTKEWGIAYGGQGCGLCMEAYTDSDFVACLGTRRS
DSGAVLMLAKGAISWHSRMQEVKTSGTSEAEYNALSEVVKDVLFLRQVQE
FMEPSMRVGAVNVFEDNEGAIKLVTNKHASRRTKHIGVKHHLGRDASDAQ
RVRVAYVRSEDQHAGLLTKPLEDVQKFCKHAKFILNVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like