mRNA_F-serratus_M_contig92.20587.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.870e-54 Identity = 125/225 (55.56%), Postives = 140/225 (62.22%), Query Frame = 1
Query: 4 GSSSPSGQRREWERFNQNAERFERQRA-----------RRAACVSSKGGTWTPSS------------------GTPTSGC--------------------SLNPPTDATKKALPPALRRRFYEVYVPELVDRADLKRVADDYLS-GVSAEQDHLAFTAVDLYLWARGLAAESLSDGAGQRPRYSLRTLVGALSAARRLVDRGFSPRRAMIEGIRGAFEIQLDG*G 528
GS+SPSGQRR+WERF+ NAERFERQRA + + G W G S C ++NPPTDA+KK LPPALRRRF EVYVPEL DR DLK+V D Y+S GVS + D LAFTAVDLYLWARGL+ ESLSDGAGQRPRYSLRTLVGA+S ARRLVDRGFS +RAM+EG R FE QLDG G
Sbjct: 40 GSTSPSGQRRDWERFHSNAERFERQRAAVEGSFAFSFVEGVLVKAIREGKWVLLDEINLASAETLQRLSGLLEGAEGSLCLTERGDMNPVVRHKDFRLFAAMNPPTDASKKDLPPALRRRFSEVYVPELDDRVDLKQVVDGYISDGVSVDHDGLAFTAVDLYLWARGLSTESLSDGAGQRPRYSLRTLVGAVSCARRLVDRGFSAKRAMVEGYRSLFETQLDGDG 264
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: A0A6H5JD74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD74_9PHAE) HSP 1 Score: 186 bits (471), Expect = 4.970e-54 Identity = 94/124 (75.81%), Postives = 106/124 (85.48%), Query Frame = 1
Query: 160 LNPPTDATKKALPPALRRRFYEVYVPELVDRADLKRVADDYLS-GVSAEQDHLAFTAVDLYLWARGLAAESLSDGAGQRPRYSLRTLVGALSAARRLVDRGFSPRRAMIEGIRGAFEIQLDG*G 528
+NPPTDA+KK LPP+LRRRF EVYVPEL DR DLK+V D Y+S GVS + + LAFTAVDLYLWAR L++ESLSDGAGQRPRYSLRTLVGA+S ARRLV RGFSP+RAM+EG R FE QLDG G
Sbjct: 83 MNPPTDASKKDLPPSLRRRFSEVYVPELDDRLDLKQVVDGYISSGVSVDHESLAFTAVDLYLWARVLSSESLSDGAGQRPRYSLRTLVGAVSCARRLVQRGFSPKRAMLEGFRSLFETQLDGDG 206
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: A0A835Z947_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z947_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.020e-29 Identity = 111/300 (37.00%), Postives = 137/300 (45.67%), Query Frame = 3
Query: 78 KGAEGSLCLIERGDVDSIVRHADFRLFAESSHRRHQESLATGTAPTVL*GVCSRTGRSCGP*ARC*RLLIWCLGGARPPGIHGR*PLSMGQGP----RGGEFE--------RWCRTTTTIF-----PQDPCWSF-------------VRRSAFGRPWF*PSEGYD*RHPWGFRNPVGRVRSHVGILKAF-----GEDFSAKDIDKPPRRPGGRGGGSDPWVVIGPFWLEGGPLDPVDAA*LDACTKQRRFVLTASVHRTLRCLVRAAASSDSHVLLQGPTSAGKTSIVEYLSARLGHRCV 872
+G++GSLCL+ERGD + I RH +FRLFA + A P L C T G + G R H LS G G GGE +CR Q P +S +A P EG+ P R H +LKAF G ++KPP RP G G++ W ++GPFWLE GPL+ D A +A T RRFVLT +V RTLR L RA A S + VLLQGPTSAGKT++VEYL+AR GHRCV
Sbjct: 531 EGSDGSLCLMERGDTEPITRHPNFRLFAAMNP---PTDAAKKDLPPAL--RCRFTEVYVGE--------LTDRGDLRAVAAH---YLSRGAGVAALGEGGEARVATCVDVYLYCRKVAQEKLCDGGGQRPHYSLRSLCVALAAARALQAAAARASPARALLEGFAAAFETQLDAP-SRDLLHRSLLKAFMPKGGGXXXXXXXLEKPPPRPPG---GAEKWELVGPFWLEAGPLERRDWAQAEAATGLRRFVLTPAVERTLRDLARAVAVSKAPVLLQGPTSAGKTTLVEYLAARCGHRCV 810
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: A0A7S1YT04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YT04_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.700e-27 Identity = 66/127 (51.97%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 160 LNPPTDATKKALPPALRRRFYEVYVPELVDRADLKRVADDYLSGV------SAEQDHLAFTAVDLYLWARGLAAESLSDGAGQRPRYSLRTLVGALSAARRLV-DRGFSPRRAMIEGIRGAFEIQLD 519
+NP TDA KK +PP++R RF E+YV ELVD +L+ VA YLSG + EQ+H TAVD+YL R L+ +SL DG GQ+PRY++RT+ ALSA R LV ++ FSP RA++EG +FE LD
Sbjct: 423 MNPATDAGKKDIPPSMRSRFTEIYVDELVDPVELRSVAARYLSGAIETSSGNLEQNHTIMTAVDVYLNCRQLSEQSLVDGGGQKPRYTMRTMCRALSAGRNLVLEQRFSPTRAILEGFELSFEGPLD 549
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: A0A7S4N8L4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8L4_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.400e-26 Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = 1
Query: 160 LNPPTDATKKALPPALRRRFYEVYVPELVDRADLKRVADDYLSGVSA-------EQDHLAFTAVDLYLWARGLAAESLSDGAGQRPRYSLRTLVGALSAARRLV-DRGFSPRRAMIEGIRGAFEIQLD 519
+NP TDA KK LPPA+R RF E+YV ELVD +L+ VA YL G S E T+VD+YL R LA SL+DG+GQRPRY+LRTL ALSAAR LV + + RRA++EG AFE LD
Sbjct: 64 MNPATDAGKKDLPPAVRSRFSEIYVDELVDPVELRTVAAKYLRGASVGGDGASLESSDAVLTSVDVYLKCRSLANRSLADGSGQRPRYTLRTLCRALSAARTLVRTQKWKLRRALLEGFELAFEGPLD 191
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: K0TEP4_THAOC (Midasin n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEP4_THAOC) HSP 1 Score: 112 bits (281), Expect = 4.050e-24 Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 1
Query: 160 LNPPTDATKKALPPALRRRFYEVYVPELVDRADLKRVADDYL------SGVSAEQDHLAFTAVDLYLWARGLAAESLSDGAGQRPRYSLRTLVGALSAARRLV-DRGFSPRRAMIEGIRGAFEIQLD 519
+NP TDA KK LP ++R RF E+YV EL+D L+ VA YL SGV E ++VDLYL R L+ +SL+DG GQ+PRY+LRTL L++AR L+ + F+P+RA++EG AFE LD
Sbjct: 1099 MNPATDAGKKDLPSSIRSRFTELYVDELLDSTQLRSVAARYLEGAVVTSGVPLEHTESVLSSVDLYLKCRSLSDQSLADGGGQKPRYTLRTLTRTLTSARNLILQQKFAPQRAILEGFELAFEASLD 1225
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: A0A5D6XYG6_9STRA (VWFA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYG6_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.730e-20 Identity = 54/112 (48.21%), Postives = 73/112 (65.18%), Query Frame = 3
Query: 540 ILKAFGEDFSAKDIDKPPRRPGGRGGGSDPWVVIGPFWL-EGGPLDPVDAA*LDACTKQRRFVLTASVHRTLRCLVRAAASSDSHVLLQGPTSAGKTSIVEYLSARLGHRCV 872
I F + AKD+ + P RPGGR +D +V++ +W+ +GG LDP D + D T +++FVLT SV LR L RAA VLLQGPTSAGKTS++ YL+AR+G +CV
Sbjct: 1058 IKSTFAKTMKAKDLARAPPRPGGRAATND-FVLVSSYWVRQGGFLDPRDDSIADPVTNRKKFVLTKSVDENLRHLARAAVIGKYPVLLQGPTSAGKTSLIGYLAARIGQKCV 1168
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: A0A4D9D334_9STRA (VWFA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D334_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.330e-19 Identity = 89/220 (40.45%), Postives = 109/220 (49.55%), Query Frame = 1
Query: 160 LNPPTDATKKALPPALRRRFYEVYVPELVDRADLKRVADDYLS--GVSAEQDHLAFTAVDL---YLWARGLAAESLSDGAGQRPRYSLRTLVGALSAARRLV--DRGFSPRRAMIEGIRGAFEIQL-DG*GPMSEY*RLSAKT-----SPRRTSIS-HQGDLAEEAE-------AVTLGW*LDLSGLRAVRWIPSMLRSWTLVPSSAGLF*RRPFTEPSA 756
+NP DA KK LPPALR RF EV V ELVD DL+ V + S G +DL YL R LA L DGAGQRPRYSLRTL AL+AAR L + +P RA++EG AFE QL D P+ L+A T S R+T + +L + A +V+ W L +SG + P LR W S G +R PSA
Sbjct: 940 MNPANDAGKKELPPALRARFTEVEVTELVDPQDLRAVVERAWSARGGGXXXXXXGVDPIDLVQLYLRCRQLAESVLVDGAGQRPRYSLRTLTRALAAARALTAAPQLLTPVRALLEGFALAFETQLQDASRPLLRKELLAALTRASGASSRKTPPGLAEKELDQPARPPPSPDSSVSPSWVL-VSGPFWLPTGPLPLRDWNQEEGSGGPGTKRFILTPSA 1158
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: A0A7S3VEM6_9STRA (Midasin n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEM6_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.760e-18 Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 3
Query: 540 ILKAFGEDFSAKDIDKPPRRPGGRGGGSDPWVVIGPFWLEGGPLDPVDAA*LDACTKQRRFVLTASVHRTLRCLVRAAASSDSHVLLQGPTSAGKTSIVEYLSARLGHRCV 872
+ G+ S K++D P RRPG + D +V+ PFW+ G L+ VD + + + + RFVLT S+ LR L RA AS VLL+GPTSAGKT++VE+L+AR GHRCV
Sbjct: 1142 LSSTLGKGLSKKELDHPGRRPGSKADSGD-FVLSKPFWICTGSLEKVDWSEASSKSSRSRFVLTPSMAVNLRRLTRAVASGPWPVLLEGPTSAGKTTMVEFLAARCGHRCV 1251
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Match: A0A484E3U5_BRELC (VWFA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3U5_BRELC) HSP 1 Score: 96.3 bits (238), Expect = 1.810e-18 Identity = 57/120 (47.50%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 160 LNPPTDATKKALPPALRRRFYEVYVPELVDRADLKRVADDYLSGVSAEQDHLAFTAVDLYLWARGLAAESLSDGAGQRPRYSLRTLVGALSAARRLVDRGFSPRRAMIEGIRGAFEIQLD 519
+NP TD KK LPP+LR RF E+YV E + DL+ V L + L V YL AR LA LSDGA Q+PRYSLRTL AL R L+ RG+ RAM EG +F QL+
Sbjct: 935 MNPSTDVGKKDLPPSLRNRFTEIYVDECDNMLDLQMVVHQQLKEIVGA---LVPETVQFYLEARKLAEVRLSDGARQKPRYSLRTLCQALHITRILIQRGYGTSRAMFEGFCSSFCTQLE 1051 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig92.20587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig92.20587.1 >prot_F-serratus_M_contig92.20587.1 ID=prot_F-serratus_M_contig92.20587.1|Name=mRNA_F-serratus_M_contig92.20587.1|organism=Fucus serratus male|type=polypeptide|length=175bp SGSSSPSGQRREWERFNQNAERFERQRARRAACVSSKGGTWTPSSGTPTSback to top mRNA from alignment at F-serratus_M_contig92:215201..223381+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig92.20587.1 ID=mRNA_F-serratus_M_contig92.20587.1|Name=mRNA_F-serratus_M_contig92.20587.1|organism=Fucus serratus male|type=mRNA|length=8181bp|location=Sequence derived from alignment at F-serratus_M_contig92:215201..223381+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig92:215201..223381+ >mRNA_F-serratus_M_contig92.20587.1 ID=mRNA_F-serratus_M_contig92.20587.1|Name=mRNA_F-serratus_M_contig92.20587.1|organism=Fucus serratus male|type=CDS|length=1050bp|location=Sequence derived from alignment at F-serratus_M_contig92:215201..223381+ (Fucus serratus male)back to top |