mRNA_F-serratus_M_contig903.20456.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig903.20456.1
Unique NamemRNA_F-serratus_M_contig903.20456.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KKU2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU2_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 5.260e-71
Identity = 133/239 (55.65%), Postives = 162/239 (67.78%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHL 2583
            R  +N KAV P  +  EL K+ L+GD  L R    I+V VW+TG+VPQ WKDA T  VL KK D  ECGNYR ISLVAHAGK+LLK++A RLS +CE   IL  EQSGFR +RST DM+F I+ L EL R K   ++ C +DLTKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLRQGC LAPLLFN++FAA++ VA   F  D  +   +V +
Sbjct:  182 REMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDA-TIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFAAMLMVAVAEFDKDPKVTADMVKI 419          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KAA3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA3_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.340e-70
Identity = 131/239 (54.81%), Postives = 161/239 (67.36%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHL 2583
            R  +N KAV P  +  EL K+ L+GD  L R    I+V VW+TG+VPQ WKD  T  VL KK D  ECGNYR ISLVAHAGK++LK++A RLS +CE   IL  EQSGFR +RST DM+F I+ L EL R K   ++ C +DLTKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLRQGC LAPLLFN++FAA++ VA   F  D  +   +V +
Sbjct:  330 RGMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDT-TIKVLFKKGDTMECGNYRGISLVAHAGKVMLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFAAMLMVAVAEFDKDPKVTADMVKI 567          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5JLV5_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLV5_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.660e-70
Identity = 129/240 (53.75%), Postives = 158/240 (65.83%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHLR 2586
            R   N KAV P  +  EL K+ L+GD  L R     +V VW+TG+VPQ WKDA T  VL KK D  ECG YR ISLVAHAG +LLK++A RLS +CE   IL  EQSGFR +RST DM+F I+ L EL R K   ++ C +DLTKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLR GC LA LLFN++FAA++ VA   F  D  +M  +V ++
Sbjct:  124 REMVNRKAVGPDDLPAELIKLFLDGDQGLLREFHATVVDVWQTGDVPQQWKDA-TIKVLFKKGDTMECGKYRGISLVAHAGNVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFGVGQGLRLGCNLASLLFNLFFAAMLMVAVAEFDKDPKVMADMVKIK 362          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KE31_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE31_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 2.000e-70
Identity = 135/255 (52.94%), Postives = 166/255 (65.10%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHLRKKRDARG-RGKQLSK 2628
            R  +N KAV P  +  EL K+ L+GD    R    I+V VW+TG VPQ WKDA T  VL KK D  ECGNYR ISLVAHAGK+LLK++A RLS +CE   IL  EQSGFR +RST DM+F I+ L EL R K   ++ C +DLTKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLRQGC LAPLLFN++ AA+  VA T F  D  +   ++ +  + +  G RG+   K
Sbjct:   79 RGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDA-TIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGK 332          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KQK0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK0_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 6.620e-70
Identity = 132/239 (55.23%), Postives = 160/239 (66.95%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHL 2583
            R  +N KAV P  +  EL K+ LNGD  L R     +V VW+TG+VPQ WKDA T  VL KK D  ECGNYR ISLVAHAGK+LLK++A RLS +CE   IL  EQSGFR +RST DM+F I+ L EL R K   ++ C +D TKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLRQGC LAPLLFN++FAA++ VA   F  D  +   +V +
Sbjct:  278 REMANRKAVGPDDLPAELIKLFLNGDQGLLREFHATVVDVWQTGDVPQQWKDA-TIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDPTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFAAMLMVAVAEFDKDPKVTADMVKI 515          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5L806_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L806_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 4.180e-69
Identity = 130/239 (54.39%), Postives = 158/239 (66.11%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHL 2583
            R   N KAV P  +  EL K+ L+    L R    I+V VW+TG+VPQ WKDA T  VL KK D  ECGNYR ISLVAHAGK+LLK++A RLS +CE   IL  EQSGFR +RST DM+F I+ L EL R K   ++ C +DLTKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLRQGC LAPLLFN++FA ++ VA   F  D  +   +V +
Sbjct:  124 RERDNRKAVGPDDLPAELIKLFLDEGQGLLREFHAIVVNVWQTGDVPQQWKDA-TIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFAVILMVAVAEFDRDPKVTADMVKI 361          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KC64_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC64_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 8.800e-69
Identity = 131/229 (57.21%), Postives = 155/229 (67.69%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKAD 2553
            R  +N KAV P  +  EL K+ L+GD  L R    I+V VW+TG+VPQ WKDA T  VL KK DR ECGNYR ISLVAHAGK+LLK +A RLS  CE   IL  EQSGFR +RST DM+F I+ L ELTR K   ++   +DLTKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLRQGC LAPLLFN++FA ++  A   F  D
Sbjct:  335 REMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDA-TIKVLFKKGDRMECGNYRGISLVAHAGKVLLKFVATRLSHCCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELTRKKSTAVFAHFVDLTKAYDSVDQDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFALMLMNAVAEFDKD 562          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KKB2_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB2_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 1.310e-68
Identity = 135/255 (52.94%), Postives = 166/255 (65.10%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHLRKKRDARG-RGKQLSK 2628
            R  +N KAV P  +  EL K+ L+GD    R    I+V VW+TG VPQ WKDA T  VL KK D  ECGNYR ISLVAHAGK+LLK++A RLS +CE   IL  EQSGFR +RST DM+F I+ L EL R K   ++ C +DLTKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLRQGC LAPLLFN++ AA+  VA T F  D  +   ++ +  + +  G RG+   K
Sbjct:   79 RGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDA-TIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGK 332          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5K0M7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M7_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 1.390e-68
Identity = 135/255 (52.94%), Postives = 167/255 (65.49%), Query Frame = 1
Query: 1867 RRTSNVKAVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHLRKKRDARG-RGKQLSK 2628
            R  +N KAV P  +  EL K+ L+GD  L R    I+V VW+TG+VPQ W DA T  VL KK D  ECGNYR ISLVAHAGK+LLK++A RLS +CE   IL  EQSGFR +RST DM+F I+ L EL R K   ++ C +DLTKAYDSVD  LLW V   FGVP  M++VIR FH+GM+A VR D+     WF V QGLRQGC LAPLLFN++ AA+  VA T F  D  +   ++ +  + +  G RG+   K
Sbjct:  249 REMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWNDA-TIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGK 502          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5K7X5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X5_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.720e-68
Identity = 128/233 (54.94%), Postives = 156/233 (66.95%), Query Frame = 1
Query: 1888 AVEPYGVSVELFKITLNGDPALRRRLLDIIVRVWRTGEVPQHWKDAITCMVLHKKKDRTECGNYRDISLVAHAGKILLKIIARRLSEHCEHVRILTGEQSGFRLNRSTTDMMFVIRWLQELTRTKRIPLYVCCIDLTKAYDSVD*TLLWTVHACFGVPQIMISVIRKFHDGMQACVRLDNRVC*RWFAVEQGLRQGCVLAPLLFNIYFAAVINVASTHFKADKGIMDALVHLR 2586
            AV P  ++ EL K+  + +P +  RL  I V VW  GE+PQ WKDAI   VL+KK DR+ C NYR ISL++H GK+L K I  RLS  CE   IL  EQ GFR  RST  M+FV+R LQEL R +RIPLY+C IDL KAYDSVD  LLW V A  G+P  MI+VIRKFH GM+A VR D+     WF V QGLRQGC ++PLLFN++FAA + V    F  D+ IM  LV+L+
Sbjct:    6 AVGPDLLAAELLKVDGDDEPIVLERLRAIFVEVWNGGEMPQEWKDAII-KVLYKKGDRSNCNNYRGISLLSHVGKVLAKTITNRLSAFCEANEILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSISPLLFNVFFAAPLEVIVARFSKDEVIMRDLVYLK 237          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKU2_9PHAE5.260e-7155.65Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KAA3_9PHAE1.340e-7054.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLV5_9PHAE1.660e-7053.75Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KE31_9PHAE2.000e-7052.94Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KQK0_9PHAE6.620e-7055.23Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L806_9PHAE4.180e-6954.39Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KC64_9PHAE8.800e-6957.21Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKB2_9PHAE1.310e-6852.94Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0M7_9PHAE1.390e-6852.94Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K7X5_9PHAE1.720e-6854.94Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig903contigF-serratus_M_contig903:280145..282806 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score122.1
Seed ortholog evalue3e-25
Seed eggNOG ortholog15368.BRADI2G31610.1
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.gag-polypeptide of LTR copia-type
EggNOG OGs37THH@33090,3GG2K@35493,3IIIB@38820,3M5VU@4447,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons1
Model size2662
Cds size615
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig903.20456.1prot_F-serratus_M_contig903.20456.1Fucus serratus malepolypeptideF-serratus_M_contig903 280880..281494 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932638.0685446-UTR-F-serratus_M_contig903:280144..2808791622932638.0685446-UTR-F-serratus_M_contig903:280144..280879Fucus serratus maleUTRF-serratus_M_contig903 280145..280879 +
1690964398.4636333-UTR-F-serratus_M_contig903:280144..2808791690964398.4636333-UTR-F-serratus_M_contig903:280144..280879Fucus serratus maleUTRF-serratus_M_contig903 280145..280879 +
1622932638.1088862-UTR-F-serratus_M_contig903:281494..2828061622932638.1088862-UTR-F-serratus_M_contig903:281494..282806Fucus serratus maleUTRF-serratus_M_contig903 281495..282806 +
1690964398.495708-UTR-F-serratus_M_contig903:281494..2828061690964398.495708-UTR-F-serratus_M_contig903:281494..282806Fucus serratus maleUTRF-serratus_M_contig903 281495..282806 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932638.086267-CDS-F-serratus_M_contig903:280879..2814941622932638.086267-CDS-F-serratus_M_contig903:280879..281494Fucus serratus maleCDSF-serratus_M_contig903 280880..281494 +
1690964398.4770231-CDS-F-serratus_M_contig903:280879..2814941690964398.4770231-CDS-F-serratus_M_contig903:280879..281494Fucus serratus maleCDSF-serratus_M_contig903 280880..281494 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig903.20456.1

>prot_F-serratus_M_contig903.20456.1 ID=prot_F-serratus_M_contig903.20456.1|Name=mRNA_F-serratus_M_contig903.20456.1|organism=Fucus serratus male|type=polypeptide|length=205bp
MNEEFEGLKDSITFKVLDGLPEGEKATGSRWVLSSKSNKNRNITKTKARL
VAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFT
KAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVS
VHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAGTRVEVNKLTTCDA
QQRL*
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mRNA from alignment at F-serratus_M_contig903:280145..282806+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig903.20456.1 ID=mRNA_F-serratus_M_contig903.20456.1|Name=mRNA_F-serratus_M_contig903.20456.1|organism=Fucus serratus male|type=mRNA|length=2662bp|location=Sequence derived from alignment at F-serratus_M_contig903:280145..282806+ (Fucus serratus male)
GAAGAATAAGACAGCGATGACGACCTCGAAGCGACGTGGGAGTCTGACAC ACCAGACGCTGCTGAAGGAACTGATGATGCGATCAGTGACAAGCCTGTTG CCAGTGAAGGTTCGTCTCCTTCCACGGTAATTTCTCGCAGGGTTCGTTTG GAGGTTGAGATAGTATTTCGCCTTCAAACAGCAACAGTAGCAGCAGTAGC AGCAGCAGCAACGCAACATCATAGACAGCGAAAGGGCAGTGAAGAGCAAT GTCGCTCGACTTCCGGAGGAATTGCCAAAACTGAAAAGGCGAGAAGAATC GACTTGAGAGTTGCCGTTTCGTGGACAGCCACTCGTTTCCTCTAGACTGC GACAACGACATGTTGTCGGCGAACATGATGAAGAAAGCGAGGATTATGAA CATGCTCTTCTAGAAAAACTGAGAGAAGCCAAGAAGCTTGATCAGAAAGA CGAGTCTGAGGAAGGACTCGGTGGATACGACTACAACGTGCTGTCGGATT CGCTTGCTCTGAGGCAGCTGGAGTTCGATGTTAAAGAGTCTAACAACAAC GCCCTACCTCTCATCAACAGCATGGACGACGAGTACGACGACATCGCCCT GGTCGTCGAGGGAACAGGAGGGGAGTCTGAGTTTGAGATGTCTTCTGGTC CTATTATAGTAGTGAAGCAGAGGCATCTCCTGTGTCAGTTGGGGGTGTAC TTAAGTCTCGCTGTAAAGGAACGTGGCTTTGGGCCATGAATGAAGAATTC GAGGGTTTAAAAGATTCGATTACTTTCAAGGTATTGGATGGACTGCCCGA GGGCGAGAAGGCCACTGGGTCTCGATGGGTGCTTTCAAGTAAGTCAAACA AGAATAGAAACATCACAAAGACAAAAGCCAGACTTGTGGCAAAGGGGTTC ATGCAAAGAGAAGGCGTGAACTATCTCCAAACGTCAGCACTAACACTCGC AGGGGCATCGGTCAAGACGATGTCGGTCTTTGCAAATGATATGGGATTCA AACAATATCATCTAGATGTAAAACAGGCATTCACCAAGGCAAAGCTAGAC TGCAAGGTTGTCACGAAGTTTCCCGGTGGATGCGGTGAACTGTCTGGAAA GTATGTATATCTCGAAAAAGCGCTGTATGGTCTTAAGCAGAGAGGTTGGC TTTGGAACAATATGCTGGTTAATAAACTAGTTTCTGTGCACGGCATGGAA CAGTGTATGACTGACCCTTGCGTGTTTCGTCTGATTCGGGAGGGCAAACT GGTACTGACCTTGGCTGTGCATGTAGACGACATGGATGTCGCTGGCACTA GGGTTGAGGTTAACAAACTAACTACTTGTGACGCTCAACAAAGACTTTGA GACGAATAATCTCGGAGAGCTGTCTTTCTTTACGGGATGTACCATCACCC AAGACACTGAGAAGGGTTTAACCAGTATCAGCCAGAAAACGTGCATCGAG GTAATTGCGAGACGCTTTAACGTGACCACTCCTTCCCCTTACCCCGCTTC TCCCTGTGCGAACGTAGAAGCGAAGGTAGAGGGTGAATCTGGTGGTACGT GGCCTTACAAAGAGGCTGTCGGAGGGTTGATGTGGCTGGTTGTCATGTCA AGGCCGGACATTACCAACGCTGTACGAGCGGTATTGCGTCACTCCAACAG CCCTGCAGAGAGACACTGGAAAGTTGTGCTCCAGATCACAAGATACGTGT TAGGAACAAAGGATCTAAGTCTTACGTTTGAATGGGGATCGGGATTAGGG ATCAGCCTAATCGCGTGATGTTATCACTACTCGTCCACTAACAAAGTTAA GCAGCGTGGGGAAGGGTTAGTACTACGGTGGGGATCACGCGGGGAACCAT TGCTGTTCCTTTTTTTCGGCGTACGTCAAACGTAAAAGCTGTCGAACCGT ACGGAGTCTCCGTCGAGCTGTTCAAGATCACTCTCAACGGTGATCCTGCC CTGCGCCGGAGACTGCTCGATATCATCGTTCGTGTTTGGAGGACGGGCGA GGTGCCGCAGCACTGGAAAGATGCCATCACATGCATGGTACTTCACAAAA AGAAGGATCGGACAGAGTGTGGAAACTACAGGGACATCTCGCTGGTAGCG CACGCCGGCAAGATACTGCTAAAGATCATCGCTCGCCGACTCAGCGAGCA CTGTGAGCACGTGAGGATCCTGACGGGGGAACAGAGTGGTTTCCGACTGA ACCGTTCTACCACCGATATGATGTTTGTGATTCGTTGGTTACAGGAGCTG ACGCGAACGAAACGAATTCCGCTCTATGTATGTTGTATCGACCTTACCAA AGCGTACGACTCCGTTGATTGAACCCTCCTCTGGACAGTACACGCCTGTT TTGGCGTGCCACAGATTATGATCTCGGTCATTCGTAAATTCCACGATGGC ATGCAAGCATGCGTGCGGCTCGACAACAGGGTGTGCTAGAGGTGGTTCGC TGTGGAACAAGGTCTTCGTCAAGGGTGCGTGCTCGCACCCCTCCTATTCA ACATATATTTTGCGGCGGTTATAAACGTGGCCTCCACACATTTCAAGGCG GACAAAGGCATCATGGACGCTTTGGTACACCTGAGGAAGAAAAGGGATGC GAGGGGGCGGGGGAAGCAGCTGTCGAAGAGTCGGTCCTCGCGACGCCGCT TTGGGGTATGCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig903:280145..282806+

>mRNA_F-serratus_M_contig903.20456.1 ID=mRNA_F-serratus_M_contig903.20456.1|Name=mRNA_F-serratus_M_contig903.20456.1|organism=Fucus serratus male|type=CDS|length=1230bp|location=Sequence derived from alignment at F-serratus_M_contig903:280145..282806+ (Fucus serratus male)
ATGAATGAAGAATTCGAGGGTTTAAAAGATTCGATTACTTTCAAGGTATT
GGATGGACTGCCCGAGGGCGAGAAGGCCACTGGGTCTCGATGGGTGCTTT
CAAGTAAGTCAAACAAGAATAGAAACATCACAAAGACAAAAGCCAGACTT
GTGGCAAAGGGGTTCATGCAAAGAGAAGGCGTGAACTATCTCCAAACGTC
AGCACTAACACTCGCAGGGGCATCGGTCAAGACGATGTCGGTCTTTGCAA
ATGATATGGGATTCAAACAATATCATCTAGATGTAAAACAGGCATTCACC
AAGGCAAAGCTAGACTGCAAGGTTGTCACGAAGTTTCCCGGTGGATGCGG
TGAACTGTCTGGAAAGTATGTATATCTCGAAAAAGCGCTGTATGGTCTTA
AGCAGAGAGGTTGGCTTTGGAACAATATGCTGGTTAATAAACTAGTTTCT
GTGCACGGCATGGAACAGTGTATGACTGACCCTTGCGTGTTTCGTCTGAT
TCGGGAGGGCAAACTGGTACTGACCTTGGCTGTGCATGTAGACGACATGG
ATGTCGCTGGCACTAGGGTTGAGGTTAACAAACTAACTACTTGTGACGCT
CAACAAAGACTTTGAATGAATGAAGAATTCGAGGGTTTAAAAGATTCGAT
TACTTTCAAGGTATTGGATGGACTGCCCGAGGGCGAGAAGGCCACTGGGT
CTCGATGGGTGCTTTCAAGTAAGTCAAACAAGAATAGAAACATCACAAAG
ACAAAAGCCAGACTTGTGGCAAAGGGGTTCATGCAAAGAGAAGGCGTGAA
CTATCTCCAAACGTCAGCACTAACACTCGCAGGGGCATCGGTCAAGACGA
TGTCGGTCTTTGCAAATGATATGGGATTCAAACAATATCATCTAGATGTA
AAACAGGCATTCACCAAGGCAAAGCTAGACTGCAAGGTTGTCACGAAGTT
TCCCGGTGGATGCGGTGAACTGTCTGGAAAGTATGTATATCTCGAAAAAG
CGCTGTATGGTCTTAAGCAGAGAGGTTGGCTTTGGAACAATATGCTGGTT
AATAAACTAGTTTCTGTGCACGGCATGGAACAGTGTATGACTGACCCTTG
CGTGTTTCGTCTGATTCGGGAGGGCAAACTGGTACTGACCTTGGCTGTGC
ATGTAGACGACATGGATGTCGCTGGCACTAGGGTTGAGGTTAACAAACTA
ACTACTTGTGACGCTCAACAAAGACTTTGA
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