prot_F-serratus_M_contig903.20456.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig903.20456.1
Unique Nameprot_F-serratus_M_contig903.20456.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length205
Homology
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5JKF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF2_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.780e-31
Identity = 74/194 (38.14%), Postives = 116/194 (59.79%), Query Frame = 0
Query:    1 MNEEFEGLKDSITFKVLDGLPEGEKATGSRWVLSSKSNKNRNITKTKARLVAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAGTRVEVNK 194
            +  EF GL D+ TF  +    E   A  ++WV + K+++    TK KARLVA+G MQR  +++ +  A T++ +SV+ ++  A +      H D++QAF +++LD  V  + P GCG LSG  V L K+LYGLKQ    W++ L   L+ + G  QC+ D CVFRL+ EG++++ + VHVDD+   G +   +K
Sbjct:  372 VGREFFGLLDAGTFSPVKQPVEN--AIIAKWVFNCKADEYGRPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELDEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLLL-GFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDK 562          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5K9I1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I1_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 2.030e-31
Identity = 74/168 (44.05%), Postives = 102/168 (60.71%), Query Frame = 0
Query:   20 LPEGEKATGSRWVLSSKSNKNRNITKTKARLVAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAG 187
            L + E    ++WV   KS++    T  K+RLVA+G MQR  V+  +T A T+A +SV+ ++  A +      H D+KQAF ++ LD  V  + P GCG LSG  V L K+LYGLKQ    W++ L   L+ + G  QCM D CVFRLI EG++V+TL VHVDD+   G
Sbjct:  495 LRQPESVIKAKWVFDWKSDEYGWPTNVKSRLVARGDMQRVHVDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICL-GFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIG 661          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5L4L4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L4_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 2.950e-29
Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 0
Query:   24 EKATGSRWVLSSKSNKNRNITKTKARLVAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAGTR 189
            E    ++ V + KS++    T  K+RLVA+G MQR  V+  +T A T+A +SV+ ++  A +        D+KQAF ++ LD  V  + P GCG LSG  V L K+LYGLKQ    WN+ L   L+ + G+ QC+ D CVFRLI+EG++V+TL VHVDD+   G R
Sbjct:  894 ESVIKAKCVFNWKSDEYGWPTSVKSRLVARGDMQRVHVDCGETYAPTVAVSSVRLLAARACEQNLSLRRFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWNSHLARCLICL-GIIQCLADTCVFRLIKEGRVVVTLVVHVDDIFSIGER 1058          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KAM7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM7_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.790e-28
Identity = 74/187 (39.57%), Postives = 101/187 (54.01%), Query Frame = 0
Query:    1 MNEEFEGLKDSITFKVLDGLPEGEKATGSRWVLSSKSNKNRNITKTKARLVAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAG 187
            M +E +G   + TF  +  L EG+KATGS+WVLS K+N    I   KA                          S+KT+   A++ G K  H DVKQA+  AKL  ++  +FPGGCG +SGK V +E ALYGLKQ G  W     + L+   G EQ   DPCVFR + +G++V  + ++VDD+ VA 
Sbjct:  270 MKKEIDGHDKTGTFTKVKELYEGQKATGSKWVLSWKTNDKGLIVDFKA-------------------------PSIKTVIAVASEKGKKLAHWDVKQAYIHAKLKDELYLRFPGGCGSMSGKVVNVESALYGLKQSGREWGFEAADALIE-DGYEQYRVDPCVFRKVVDGEVVGLIVIYVDDILVAA 430          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5JJW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW4_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 8.090e-28
Identity = 73/195 (37.44%), Postives = 101/195 (51.79%), Query Frame = 0
Query:    1 MNEEFEGLKDSITFKVLDGLPEGEKATGSRWVLSSKSNKNRNITKTKARLVAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAGTRVEVNKL 195
            M EEFEG   + TF  +DG PEG +   S+W  S K+NK   + K KARLVA+GF+Q   V+   +++   + AS+K M   AN+ G    H DVKQA                            E+A+YGLKQ G  W     + LV  +G EQC  DPC FR I +  +V+ + ++VDD+ VAG+  +  KL
Sbjct:  204 MREEFEGHLGTGTFSFVDGAPEGRRPVSSQWCFSWKTNKEGKMDKFKARLVARGFLQIPNVDSFHSASPCPSSASIKLMFAVANEKGMNLNHWDVKQA----------------------------ERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCCFREIVDEVVVMIIVIYVDDILVAGSDEDCEKL 369          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KRJ6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ6_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.220e-27
Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 0
Query:   24 EKATGSRWVLSSKSNKNRNITKTKARLVAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTL 176
            E    ++WV   KS++    T  K+RLVA+G MQR  V+  +T A T+A +SV+ ++  A +      H D+KQAF ++ LD  V  + P GCG LSG  V L K+LYGLKQ    W++ L   L+ + G  QCM D CVFRLI EG++V+TL
Sbjct:  150 ESVIKAKWVFDWKSDEYGWPTNVKSRLVARGDMQRVHVDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICL-GFIQCMADTCVFRLIEEGRVVVTL 301          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5K1A8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1A8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.040e-27
Identity = 64/151 (42.38%), Postives = 88/151 (58.28%), Query Frame = 0
Query:    1 MNEEFEGLKDSITFKVLDGLPEGEKATGSRWVLSSKSNKNRNITKTKARLVAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSV 151
            M +E +G   + TF  +   P G KA GS+WV S K+N+   I   KAR+VA GF Q  G ++  +S+   + AS+K +   A + G K  HLDVKQA+T AKL  ++   FP GCG +SGK V  E+ALYGLKQ G  W     + L+ +
Sbjct:   69 MKKEIDGHGKTGTFTKVKEPPGGRKAIGSKWVFSWKTNEKGLIVDFKARMVAWGFSQIPGFDFHHSSSACPSAASIKAVIAVATEGGKKLAHLDVKQAYTHAKLKEEIYLSFPEGCGSMSGKVVKTERALYGLKQSGREWGFEAADALIKL 219          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KDF0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDF0_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 8.430e-26
Identity = 65/157 (41.40%), Postives = 94/157 (59.87%), Query Frame = 0
Query:   31 WVLSSKSNKNRNITKTKARLVAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAG 187
            WV + KS++    +  K+RLVA+G MQR  V+  +T A T   +SV+ ++  A +      H D+KQAF +++LD  +  + P GCG LSG  V L K+LYGLKQ    W++     L+ + G  QC+ D  V RLI EG++V+TL VHVDD+   G
Sbjct:  481 WVFNWKSDEYGWPSSVKSRLVARGEMQRVHVDCGETYAPTAVVSSVRLLAAMACEQNLSLRHFDIKQAFVQSELDEDIFMRLPEGCGRLSGMIVKLNKSLYGLKQVSRQWHSHSARCLICL-GFIQCLADTIVLRLIAEGRVVVTLVVHVDDIFSIG 636          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 8.610e-26
Identity = 61/132 (46.21%), Postives = 82/132 (62.12%), Query Frame = 0
Query:   56 MQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAG 187
            MQR  V+  +T A T+A +SV+ ++  A +      H D+KQAF ++ LD  V  + P GCG LSG  V L K+LYGLKQ    W++ L   L+ + G  QCM D CVFRLI EG++V+TL VHVDD+   G
Sbjct:    1 MQRVHVDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICL-GFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIG 131          
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 3.910e-24
Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = 0
Query:   65 QTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFTKAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVSVHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAG 187
            +T A T+A +SV+ ++  A +      H D+KQAF ++ LD  V  + P GCG LSG  V L K+LYGLKQ    W++ L   L+ + G  QCM D CVFRLI EG++V+TL VHVDD+   G
Sbjct:  184 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICL-GFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIG 305          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig903.20456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKF2_9PHAE1.780e-3138.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K9I1_9PHAE2.030e-3144.05Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5L4L4_9PHAE2.950e-2943.37Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAM7_9PHAE3.790e-2839.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JJW4_9PHAE8.090e-2837.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KRJ6_9PHAE1.220e-2743.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1A8_9PHAE3.040e-2742.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KDF0_9PHAE8.430e-2641.40Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JLN0_9PHAE8.610e-2646.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE3.910e-2446.34Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 15..191
e-value: 2.1E-31
score: 109.4
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..165
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig903contigF-serratus_M_contig903:280880..281494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig903.20456.1mRNA_F-serratus_M_contig903.20456.1Fucus serratus malemRNAF-serratus_M_contig903 280145..282806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig903.20456.1 ID=prot_F-serratus_M_contig903.20456.1|Name=mRNA_F-serratus_M_contig903.20456.1|organism=Fucus serratus male|type=polypeptide|length=205bp
MNEEFEGLKDSITFKVLDGLPEGEKATGSRWVLSSKSNKNRNITKTKARL
VAKGFMQREGVNYLQTSALTLAGASVKTMSVFANDMGFKQYHLDVKQAFT
KAKLDCKVVTKFPGGCGELSGKYVYLEKALYGLKQRGWLWNNMLVNKLVS
VHGMEQCMTDPCVFRLIREGKLVLTLAVHVDDMDVAGTRVEVNKLTTCDA
QQRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like