mRNA_F-serratus_M_contig902.20443.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig902.20443.1
Unique NamemRNA_F-serratus_M_contig902.20443.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: D8LTC5_ECTSI (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTC5_ECTSI)

HSP 1 Score: 473 bits (1216), Expect = 2.190e-159
Identity = 276/458 (60.26%), Postives = 316/458 (69.00%), Query Frame = 3
Query:  204 MNARQGGGKRRRGRANGTGTGVAVSAVNSSITERRS-AVSEAVLAVQHATTEDELLAVAHSHREILRPGVLSQALLRIAKPLVQVAKRAAREKFIKDPRLLDLFMAASAPAAAMQDRSDAQSPRSKGDVAAYTSDDRPLLSGAQAADIVWACGLLQWLPDEGD----------RLEHLLKLIALAAASPSGIDGWHVTNAVWALDRLG-------------GFAPEMARA---------------------------GLCRGHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRR--HNFYLFSGDCVRMTAGCQRDYQHCIKLATEDVGPRISLVFKQSI 1418
            M+AR+GG  RRRGR   +G+     A  +++ E  S A + A LAVQHA+ ED LL VA+SHR  LRPG+LSQALLR+AKPLVQV+++ ARE  + DPRL  LF+AAS+PAAA    + A+         A        LSG QAAD+VWACGLLQWLP +            RL  L+ L+A AA+S  GID  HVTN +WAL+RLG                 E AR                            G+  G +AVEELR ++ +LPFRAIPS+FEGLRVEDFR+EV F RDEILLGGGKVLSESRLTAWQSSD LPFAYSGKVMEP  FSPNVLRLRDAL+ERTGVLYDGVLLNLYES SSAMRYHSDPDVGT+WTQDTSVVSVGDTRQF LR TLD+S R  H FYL SGDCVRMT GCQRDYQHC+K+A E+VG RISLVFKQSI
Sbjct:    1 MHARRGGKGRRRGRTGVSGSPRRAGAAANAVRETPSTAAALAALAVQHASHED-LLGVAYSHRAALRPGLLSQALLRLAKPLVQVSRQTAREAVLADPRLQALFLAASSPAAADGGETAAEP--------AAAGGTNQSLSGPQAADVVWACGLLQWLPADDXXXXXXXXXHRRLAQLVALVARAASSKVGIDDGHVTNVLWALERLGVSKSPAEKKRKRKACEAEAARGAETPIAAPGCGAKXXXXXXXXXXXXXXGVWEGDEAVEELRSRVENLPFRAIPSLFEGLRVEDFRDEVAFRRDEILLGGGKVLSESRLTAWQSSDGLPFAYSGKVMEPTSFSPNVLRLRDALYERTGVLYDGVLLNLYESRSSAMRYHSDPDVGTIWTQDTSVVSVGDTRQFALRRTLDHSPRGRHAFYLSSGDCVRMTDGCQRDYQHCVKVAKEEVGARISLVFKQSI 449          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A836CIU8_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU8_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.250e-67
Identity = 131/275 (47.64%), Postives = 168/275 (61.09%), Query Frame = 3
Query:  633 AADIVWACGLLQWLPDEGDRLEHLLKLIALAAASPSGIDGWHVTNAVWALDRLGGFAPEMARAGLCRGHKAVEELREKMASL--PF----RAIPSIFEGLRVEDFRNEVDFGRDEILLGGG---KVLSESRLTAWQSSDDLPFAYSGKVMEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKL----ATEDVGPRISLVFKQSI 1418
            A D +WA GLL   P EG     L  L+A  AA  S +    ++  VW+L R+G              H   +EL+  + +L  PF    R +P+ +    VE    EV+F RDEI LG G   KVL ESRLTAWQS   L F+YSGK M P+P +P V++LR+AL E TG LYDGVL+NLY + S  MR+H DP  G  WT++T+VVSVG+TRQFV+R   D++ RH FY+ SGDCVRM   CQRD+QHC+K+    A    GPR+S VFKQS+
Sbjct:   22 AVDALWALGLLGQPPSEGT----LKVLLARLAADASKLQPGQLSAIVWSLQRMGAE------------HLCPQELKRPLEALKLPFSVHQRLLPASWSN--VESIMQEVEFRRDEIRLGEGGVEKVLEESRLTAWQSCTGLSFSYSGKTMAPQPMTPTVIKLREALAEHTGQLYDGVLINLYMTPSVGMRFHQDPGQGEEWTEETAVVSVGETRQFVMRRVDDHADRHVFYVSSGDCVRMFGACQRDWQHCVKVEGGAAAAGGGPRVSFVFKQSM 278          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A6T6VXL3_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6VXL3_9EUKA)

HSP 1 Score: 201 bits (510), Expect = 1.890e-55
Identity = 134/393 (34.10%), Postives = 196/393 (49.87%), Query Frame = 3
Query:  315 VSEAVLAVQHATTEDELLAVA--HSHREILRPGVLSQALLRIAKPLVQVAKRAAREKFIKDPRLLDLFMAASAPAAAMQDRSDAQSPRSKGDVAAYTSDDRPLLSGAQAADIVWACGLLQ----WLPDEGDRLEHLLKLIALAAASPSGIDGWHVTNAVWALDRLGGFAPEMARAGLCRGHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIK----------LATED---------VGPRISLVFKQSI 1418
            ++ AV  +Q A   DE+L+    H +    +   LSQ LLRI+K  + ++    R K +++ R L  +                       +      +     +   A D++ +  LL      L D    L+   +L  ++      +DG +++N VWA   LG   P +A               E+ + LPFR     F  L +E+ R EV F  DE+ LGG KV+ E R TAWQ+S ++PF YSGK M P   +P +  +R+ ++  TGV YD  L+NLY  SSS MR+HSDPD G +W+ +T+VVSVGDTR F+LRET  + +RH+FY+ SGD + M   CQ  YQH I+          +A E           GPR+S+VFKQS+
Sbjct:   15 LTRAVHELQGARGPDEILSALSRHGYGSTYKMSHLSQGLLRISKFFIPLSAAKDRRKLVRECRYLHAW-----------------------EHVRKILESDAATNAQMATDLLLSMALLMDDSGMLEDTEALLDTARRLSRISDDEIRDLDGVNLSNLVWACRILGIDPPALAL--------------ERESLLPFRLHLQAFPELDIEEIRREVQFKTDEVKLGG-KVIRERRETAWQTSSNVPFRYSGKEMAPAAMTPIIQMVRNKIYNLTGVYYDCALINLYPDSSSGMRFHSDPDQGGIWSHNTAVVSVGDTRLFILRETWKHEKRHHFYVRSGDVMEMVRDCQEKYQHAIRTEESHKFTREMAVETSEFKPSKYTYGPRVSIVFKQSL 369          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A7S3Z587_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z587_9EUKA)

HSP 1 Score: 183 bits (464), Expect = 1.050e-50
Identity = 99/208 (47.60%), Postives = 125/208 (60.10%), Query Frame = 3
Query:  876 LPFRAIPSIFEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKLATEDV---------------------------GPRISLVFKQSI 1418
            LPF     +F+ L V+   +EVDF  +++ L G K LSE R TAWQSS + PF YSGKVM P PF+P V  +RD +F+ TGV YD  LLNLY   +S MR+HSDPD G  W+ +T+VVSVGDTR FV+RE  D+S+RH FY+ SGD + M   CQ+ YQH I+     V                           GPRIS+VFKQS+
Sbjct:    1 LPFTLKMGVFDNLTVDSLLDEVDFKTEQVELQG-KKLSERRQTAWQSSTNKPFRYSGKVMSPSPFTPLVQEIRDRIFKLTGVPYDCALLNLYPDGTSGMRFHSDPDQGIHWSTNTAVVSVGDTRLFVMREMDDHSKRHQFYVTSGDVLIMHGDCQQRYQHSIRTEEPGVRAAGVALDGSSSSSSSRSKHQRWSAALGPRISIVFKQSL 207          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A2K3DVE4_CHLRE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DVE4_CHLRE)

HSP 1 Score: 176 bits (445), Expect = 4.480e-44
Identity = 105/260 (40.38%), Postives = 140/260 (53.85%), Query Frame = 3
Query:  693 LEHLLKLIALAAAS------PSGIDGWHVTNAVWALDR------LGGFAPEMARAGLCRGHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEVDFGRDEILL-GGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKP--FSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKL--ATEDVGPRISLVFKQSIR 1421
            ++ L+K  A AA S      P+ +   H+ + VWA+        +G  AP MA                    +PF  +P    GL+++DF  EV   RD I L  G K + ESRLT WQS     F YSGK M P P   +P V ++RD L   TGV YD VL+N Y      MRYH DP  G VW+ +++VVS+GDTR F+ RE  DY+ R  + + +GD VRM   CQ   QHC+++  A ED GPR+SLVFK+ +R
Sbjct:  387 VDQLVKATAAAATSSSQPQQPAPLSQQHLADLVWAVAHYDWGHCVGALAPAMA--------------------VPFAVVPQFMPGLKLQDFMAEVRLNRDVIYLEDGSKAVEESRLTGWQSDIGATFKYSGKEMVPDPSGMTPAVRKVRDELQRLTGVWYDSVLINYYGDGKCGMRYHVDPLYG-VWSPESAVVSIGDTRTFIFREISDYNSRWQYRVRNGDVVRMWGDCQDRLQHCVRVERAAEDAGPRMSLVFKERLR 625          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A835WWM2_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WWM2_9CHLO)

HSP 1 Score: 172 bits (437), Expect = 3.480e-43
Identity = 97/201 (48.26%), Postives = 121/201 (60.20%), Query Frame = 3
Query:  834 GHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEVDFGRDEILL-GGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKP--FSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKL--ATEDVGPRISLVFKQSIR 1421
            GH  V  L  +MA +PF  +P    GLR+EDF  EV   RD I L  G K + ESRLT WQS     F YSGK M P P   +P V ++RD L   TGV YD VL+N Y      MRYH DP  G VW+ +++VVS+GDTR F+ RE  DY  R  + + +GD VRM   CQ   QHC+++  A ED GPR+SLVFK+ +R
Sbjct:  391 GH-CVAALAPRMA-VPFTVVPQFMPGLRLEDFMAEVRLNRDTIYLEDGSKAVEESRLTGWQSDIGATFKYSGKEMIPDPSGMTPAVRQVRDELQRLTGVWYDSVLINYYGDGKCGMRYHVDPLYG-VWSPESAVVSIGDTRTFIFREITDYDSRWQYRVRNGDVVRMWGDCQDRLQHCVRVERAAEDAGPRMSLVFKERLR 588          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A8J5XM98_DIALT (Fe2OG dioxygenase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XM98_DIALT)

HSP 1 Score: 165 bits (417), Expect = 3.270e-42
Identity = 122/371 (32.88%), Postives = 166/371 (44.74%), Query Frame = 3
Query:  336 VQHATTEDELLAVAHSHREILRPGVLSQALLRIAKPLVQVAKRAAREKFIKDPRLLDLFMAASAPAAAMQDRSDAQSPRSKGDVAAYTSDDRPLLSGAQAADIVWACGLLQWLPDE--GDRLEHLLKLIALAAASPSGIDGWHVTNAVWALDRLGGFAPEMARAGLCRGHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEV--DFGRDEILLG---GGKVLSESRLTAWQSSDDLPFAYSGKVMEPK-PFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKLATE--DVGPRISLVFKQSI 1418
            +Q A    E++     H   L P   S ALLR A  L Q    A R          D  + A A A                         + + + + A   + A  LL W  D   G +   +L  +A  A +P  +     T   WA  +L    P                +  ++A+LPFR +  +   +  E    E+     R+ I L    G +++ E+RLT WQS   +PF+YSGK M P  P       +RD L   +G+ YD  L+NLYE     MRYH DPD GT+W+ DT V S G TR FVLR T D++  H F L  GD V M   CQ +YQHC+++  +  D GPRISLVFKQS+
Sbjct:   28 LQRARAPAEIMRAVREHAGSLSPAAASFALLRAASALKQPRHDAERAAIAGSA---DTLLVARAVA-------------------------QGVTNASTAVIALRALALLGWRADRSTGAKAACVLDKLAARACAPGELTIAEQTAVEWAACKLHLTLP------------TPPTVSAQLAALPFRVLSGVCVAVPYETLEAELRPHLRRELIALRDSRGERLVPEARLTGWQSRAGVPFSYSGKSMAPNVPDGGQFAAVRDTLRALSGIEYDSCLVNLYEHGKVGMRYHQDPDQGTLWSTDTHVASFGCTRAFVLRRTADHALHHEFTLQHGDVVHMFGACQAEYQHCVRVERDEADAGPRISLVFKQSL 358          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A835TLQ1_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TLQ1_CHLIN)

HSP 1 Score: 169 bits (427), Expect = 1.380e-40
Identity = 91/188 (48.40%), Postives = 114/188 (60.64%), Query Frame = 3
Query:  873 SLPFRAIPSIFEGLRVEDFRNEVDFGRDEILL-GGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKP--FSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKL--ATEDVGPRISLVFKQSIR 1421
            ++PF  +P    GLR+EDF  EV   RD I L  G K + ESRLT WQS     F YSGK M P P   +P V ++RD L   TGV YD VL+N Y      MRYH DP  G VW+ +++VVSVGDTR F+ RE  DY  R  + + +GD VRM   CQ   QHC+++  A  D GPR+SLVFK+ +R
Sbjct:  824 AVPFAVVPQFMPGLRLEDFMAEVALNRDVIYLEDGSKAVEESRLTGWQSDIAATFKYSGKEMIPDPSGMTPAVRKVRDELQRLTGVWYDSVLINYYGDGKCGMRYHVDPLYG-VWSPESAVVSVGDTRTFIFREIADYDSRWQYRVRNGDVVRMWGDCQDRLQHCVRVERAAADAGPRMSLVFKERLR 1010          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A250WY46_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WY46_9CHLO)

HSP 1 Score: 157 bits (397), Expect = 6.240e-40
Identity = 83/185 (44.86%), Postives = 109/185 (58.92%), Query Frame = 3
Query:  876 LPFRAIPSIFEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKVMEPK-PFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKLATED-----VGPRISLVFKQ 1412
            LPF+  P     L+++ F  EV   +D I L  G+ + E RLT WQS     F YSGK+M P  P SP + ++RD L + TGV +D VL+N Y+     MR+HSDP  G  WT  T+VVS+G  R+FV RET +   R  + + +GD V M   CQ   QHCIK+  ED     +GPR+SLVFKQ
Sbjct:  128 LPFKFCPGYMRNLKLQSFLKEVQLQQDVIELHDGRRVEEPRLTGWQSDIGATFEYSGKIMRPSGPLSPEIRKVRDQLIDLTGVKFDSVLINYYKDGRCGMRFHSDPLYGC-WTSSTAVVSIGQARRFVFRETHNVQSRWEYTVKTGDVVFMFGDCQDRLQHCIKVEREDKGALEMGPRMSLVFKQ 311          
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A835Y532_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y532_9CHLO)

HSP 1 Score: 146 bits (368), Expect = 2.490e-36
Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 3
Query:  969 GGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKP--FSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKLA--TEDVGPRISLVFKQSIR 1421
            G    + E+RLT WQS     F YSGK M+P+   FSP V R+RD L+ERTGV YD  L+N YE     MRYH DP  G  WT   +VVS+GDTR F+ RE  DY  R  + + +GD V M   CQ   QHCI++    +D GPR+SLVFKQ IR
Sbjct:  108 GRPTAVEEARLTGWQSEIGATFKYSGKEMQPQDGGFSPAVSRVRDLLYERTGVDYDSCLINFYEDGKCGMRYHVDPLYGK-WTPHQAVVSLGDTRTFIFREISDYDSRWLYRVSNGDMVHMFGDCQDRLQHCIRVERRADDAGPRMSLVFKQRIR 261          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTC5_ECTSI2.190e-15960.26Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A836CIU8_9STRA4.250e-6747.64Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A6T6VXL3_9EUKA1.890e-5534.10Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S3Z587_9EUKA1.050e-5047.60Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A2K3DVE4_CHLRE4.480e-4440.38Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835WWM2_9CHLO3.480e-4348.26Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A8J5XM98_DIALT3.270e-4232.88Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835TLQ1_CHLIN1.380e-4048.40Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A250WY46_9CHLO6.240e-4044.86Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835Y532_9CHLO2.490e-3650.32Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig902contigF-serratus_M_contig902:256508..259742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score476.9
Seed ortholog evalue1.1e-131
Seed eggNOG ortholog2880.D8LTC5
KEGG koko:K10859
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.2OG-Fe(II) oxygenase superfamily
EggNOG OGs2DH22@1,2S5VN@2759
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-12_006050.1
EC1.14.11.33
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons5
Model size1698
Cds size1446
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932636.0147264-UTR-F-serratus_M_contig902:256507..2565091622932636.0147264-UTR-F-serratus_M_contig902:256507..256509Fucus serratus maleUTRF-serratus_M_contig902 256508..256509 +
1690964397.3816705-UTR-F-serratus_M_contig902:256507..2565091690964397.3816705-UTR-F-serratus_M_contig902:256507..256509Fucus serratus maleUTRF-serratus_M_contig902 256508..256509 +
1622932636.1144125-UTR-F-serratus_M_contig902:259492..2597421622932636.1144125-UTR-F-serratus_M_contig902:259492..259742Fucus serratus maleUTRF-serratus_M_contig902 259493..259742 +
1690964397.465631-UTR-F-serratus_M_contig902:259492..2597421690964397.465631-UTR-F-serratus_M_contig902:259492..259742Fucus serratus maleUTRF-serratus_M_contig902 259493..259742 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932636.0288942-CDS-F-serratus_M_contig902:256509..2568631622932636.0288942-CDS-F-serratus_M_contig902:256509..256863Fucus serratus maleCDSF-serratus_M_contig902 256510..256863 +
1690964397.3941803-CDS-F-serratus_M_contig902:256509..2568631690964397.3941803-CDS-F-serratus_M_contig902:256509..256863Fucus serratus maleCDSF-serratus_M_contig902 256510..256863 +
1622932636.044316-CDS-F-serratus_M_contig902:257305..2573891622932636.044316-CDS-F-serratus_M_contig902:257305..257389Fucus serratus maleCDSF-serratus_M_contig902 257306..257389 +
1690964397.4046762-CDS-F-serratus_M_contig902:257305..2573891690964397.4046762-CDS-F-serratus_M_contig902:257305..257389Fucus serratus maleCDSF-serratus_M_contig902 257306..257389 +
1622932636.0566378-CDS-F-serratus_M_contig902:257716..2582561622932636.0566378-CDS-F-serratus_M_contig902:257716..258256Fucus serratus maleCDSF-serratus_M_contig902 257717..258256 +
1690964397.4156268-CDS-F-serratus_M_contig902:257716..2582561690964397.4156268-CDS-F-serratus_M_contig902:257716..258256Fucus serratus maleCDSF-serratus_M_contig902 257717..258256 +
1622932636.0778196-CDS-F-serratus_M_contig902:258397..2585761622932636.0778196-CDS-F-serratus_M_contig902:258397..258576Fucus serratus maleCDSF-serratus_M_contig902 258398..258576 +
1690964397.4255216-CDS-F-serratus_M_contig902:258397..2585761690964397.4255216-CDS-F-serratus_M_contig902:258397..258576Fucus serratus maleCDSF-serratus_M_contig902 258398..258576 +
1622932636.0958579-CDS-F-serratus_M_contig902:259203..2594921622932636.0958579-CDS-F-serratus_M_contig902:259203..259492Fucus serratus maleCDSF-serratus_M_contig902 259204..259492 +
1690964397.44994-CDS-F-serratus_M_contig902:259203..2594921690964397.44994-CDS-F-serratus_M_contig902:259203..259492Fucus serratus maleCDSF-serratus_M_contig902 259204..259492 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig902.20443.1prot_F-serratus_M_contig902.20443.1Fucus serratus malepolypeptideF-serratus_M_contig902 256510..259492 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig902.20443.1

>prot_F-serratus_M_contig902.20443.1 ID=prot_F-serratus_M_contig902.20443.1|Name=mRNA_F-serratus_M_contig902.20443.1|organism=Fucus serratus male|type=polypeptide|length=482bp
MNPHVLLLTILMGSSTCESSTPANMAINSRQPQQHLLCLSYARSSAAHRW
EHGKSALCAYRSPPGTTMNARQGGGKRRRGRANGTGTGVAVSAVNSSITE
RRSAVSEAVLAVQHATTEDELLAVAHSHREILRPGVLSQALLRIAKPLVQ
VAKRAAREKFIKDPRLLDLFMAASAPAAAMQDRSDAQSPRSKGDVAAYTS
DDRPLLSGAQAADIVWACGLLQWLPDEGDRLEHLLKLIALAAASPSGIDG
WHVTNAVWALDRLGGFAPEMARAGLCRGHKAVEELREKMASLPFRAIPSI
FEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKV
MEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGT
VWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQ
HCIKLATEDVGPRISLVFKQSIRLNKSRAKS*
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mRNA from alignment at F-serratus_M_contig902:256508..259742+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig902.20443.1 ID=mRNA_F-serratus_M_contig902.20443.1|Name=mRNA_F-serratus_M_contig902.20443.1|organism=Fucus serratus male|type=mRNA|length=3235bp|location=Sequence derived from alignment at F-serratus_M_contig902:256508..259742+ (Fucus serratus male)
CAATGAACCCGCATGTTCTCCTGCTCACCATCCTCATGGGTTCATCGACA TGCGAATCGTCGACGCCAGCCAATATGGCCATAAACTCAAGACAGCCACA GCAGCACCTATTGTGCCTTAGCTATGCCAGGAGTAGTGCTGCCCATCGCT GGGAGCATGGGAAGAGCGCCCTTTGCGCTTATCGATCTCCACCTGGGACA ACAATGAACGCTAGACAAGGAGGTGGCAAACGACGACGAGGTCGAGCGAA CGGCACAGGCACAGGAGTCGCTGTATCCGCTGTTAATAGCAGCATTACAG AGAGGCGTTCAGCTGTTTCGGAGGCAGTTCTTGCGGTTCAGCATGCTACT ACTGAGGTACAGTACAGTCAGTGTTTTATAATAGAACCTGCTACTACTGA GGTACAGTACAGTCAGTGTTTTATAATAGAACCTATCTTGTTTTATTTTT ATATAACAAATAAAATGAGCACAACTTACGGGGGACGAGTTCGAATCCGC ACGCACGAGATGGGCCACATGATAGAGCCATATTCATGATCATTCGTGCC GGGAAGTTAGTTATACGAGTAGCGTTCACGACGTTGCTTAGAGACCATCT TCGTGTGTCGCTCGTTGATCTGGCTGTTAAGGCCTCAACTCTAGGCAAAG AATCGCATTCTTGGCGCGGTTGCCTGGTCCAGAACTCCACCTTCCCGCAC TGAAAAATTACCAGTATTAATTAATATATTGACAGATACTATTATTAGTC TATGTACAATACGTAGTGCTCTCCGTGTTTGGCGTGTTGCTTTTCCAGGA CGAGCTGCTGGCGGTTGCGCACAGCCACAGAGAGATTTTGCGACCCGGTG TTCTCTCCCAGGCTCTTCTTCGGATCGCGAAGGTATACATACGAGCCTAG CGAACGCCTCCTATGCGTAGCGCTCATTAGTCGTATTTCGTGATTATTCA GCGTTGTTTGCCTGGAAGGAATTGCGCAATTGCTACGTAACTTGGCGAAT GTACAAACAGTAATCACTAGAGTTTATTAAGTCGAGTCTATTCCTTAAGA TTGAGTTATAGCGCTAGACTGAGAGCACGTGTGCGGTATCTGTCATGCCG CGGGTTGTATCGCCTACCGCTAAGTAGCAACAGCTTCCGTGCGGGCGGCA TTTTTGTTGTTGTTGTAAGCCGTCAACTTGTCTTGCCGGATCGCCCGACG GACTCGCAGCCCCTCGTCCAGGTAGCCAAACGAGCCGCACGGGAAAAATT TATCAAGGACCCGAGACTGTTAGACCTCTTCATGGCCGCGTCCGCGCCTG CAGCCGCAATGCAGGATCGCTCTGATGCGCAGTCACCACGATCAAAGGGA GATGTCGCGGCTTACACGTCGGATGACCGCCCGTTGCTTTCGGGCGCCCA AGCCGCCGACATTGTGTGGGCTTGCGGTTTGCTTCAATGGCTCCCGGACG AAGGCGACCGCTTAGAGCATCTCCTGAAATTGATTGCCCTGGCCGCCGCG TCGCCGAGCGGTATCGATGGATGGCACGTCACGAATGCCGTGTGGGCGCT CGACCGATTAGGCGGGTTCGCGCCAGAGATGGCGCGCGCGGGGTTATGCC GTGGGCACAAGGCGGTTGAAGAGCTCCGCGAGAAGATGGCTTCCCTTCCC TTTCGTGCGATACCGTCGATATTCGAAGGTCTTCGCGTCGAAGACTTCAG AAACGAAGTGGACTTCGGCAGGGACGAGATCCTGCTTGGCGGGGGGAAGG TATATCGGGCGGCTCATGGACCATTTTTTCTACCCGTCGATGTTATCTCT GCACGACCAATCATTTCCTATATTGTAGTTCCGAGCAAAAGCCATCTTTG GTTTATACGCCGCCAACGTACCTCCGCTTGACCCGGCCAGGTTCTCTCTG AGTCGAGGCTGACCGCCTGGCAGAGCAGCGATGACTTACCCTTCGCGTAC AGCGGCAAGGTGATGGAGCCTAAGCCATTCTCTCCCAACGTGCTGCGTCT ACGAGACGCTTTGTTCGAGAGGACTGGAGTGCTGTACGACGGGGTGTTGC TGAACCTTTACGAGTCGAGGTAACGAGTGCGCTAAATGAGCCGTTCTTCA CGGCAATCTTTTGACAACGAGAATTCAATCAATGAACTTAGTTGTCGATC TGGCAGGATCCACGAGGCCGTTTCCACGTTCCCGGTTAAAAGACACACAA TCCTGTTTGATATCTCGAAGGCGGTGAGAGTTTCAGGTTCCAATCCCTGT TTTGAAGTCCAACTTACAACCGATTGAAAACGTGTGTAGGGGTCTTGTCG CGTCGCCCGAGTGGTCTATTAATAGTAGATATAACCTGCGCACCTGCTAG TGCGGAAGTCGTGCGTATGATTCTCGTCAAGCAGGATTTTTATTATTTCT TCCGTAACGGGAAGCGTGGAAATGTGGGTAAGTAAAATTCAGCCATTGGT TGAGGGTTGTAAGAGTGCTGAACTTGCATCAAGATTTTAAAAAATCGTTA GGCGTGAACCGGGGAGAGAGACAGGAATATCATTACTAATTATTATTAGT GACCACAGGCAGGATGATCACGTTAAGGTCCATCAGCTTCAAGTGAGATG AAAAAAATAAACTTGGGCTTTGCTGCACGACACGCTTCCCTCCCGATTCA TCCGTCTCTCTTGTCGTCCGATCGCGGTGGGGCGGGGTTGCGCCAGCTCG AGCGCTATGCGGTATCACTCCGACCCAGACGTGGGTACCGTCTGGACTCA AGACACTTCGGTCGTCTCCGTCGGAGATACGCGCCAGTTCGTCCTGCGCG AGACGCTCGATTACTCCAGGCGCCACAACTTTTACCTCTTCAGCGGGGAC TGCGTCAGAATGACCGCCGGCTGCCAACGAGACTACCAGCACTGCATCAA GCTGGCCACAGAGGACGTAGGCCCTCGGATCTCTCTCGTTTTCAAGCAAA GCATACGGTTGAACAAAAGTCGGGCTAAATCATGATAGCTGCCTCGAGAG ATGAGTGTCGTAACGTGTAACGAAAGTGCTGTATCTATCATGACCTTACT ATTGCGGTCGCTCCTACGTATGCCTTGCACGCTACAAGTCCCCCTGCCTT AGGCGATCCACTCAGGGAAGTATTGCGCTCACCGTGAGTCGCGCTAAGTG TTCGATTTTTTGGTCAGGGACATGTCACTGGGTCACAAGCTTGCGGTTTT CTCGGCAAAGATTTAATGATGAAATCAGACCTCAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig902:256508..259742+

>mRNA_F-serratus_M_contig902.20443.1 ID=mRNA_F-serratus_M_contig902.20443.1|Name=mRNA_F-serratus_M_contig902.20443.1|organism=Fucus serratus male|type=CDS|length=2892bp|location=Sequence derived from alignment at F-serratus_M_contig902:256508..259742+ (Fucus serratus male)
ATGAACCCGCATGTTCTCCTGCTCACCATCCTCATGGGTTCATCGACATG
CGAATCGTCGACGCCAGCCAATATGGCCATAAACTCAAGACAGCCACAGC
AGCACCTATTGTGCCTTAGCTATGCCAGGAGTAGTGCTGCCCATCGCTGG
GAGCATGGGAAGAGCGCCCTTTGCGCTTATCGATCTCCACCTGGGACAAC
AATGAACGCTAGACAAGGAGGTGGCAAACGACGACGAGGTCGAGCGAACG
GCACAGGCACAGGAGTCGCTGTATCCGCTGTTAATAGCAGCATTACAGAG
AGGCGTTCAGCTGTTTCGGAGGCAGTTCTTGCGGTTCAGCATGCTACTAC
TGAGATGAACCCGCATGTTCTCCTGCTCACCATCCTCATGGGTTCATCGA
CATGCGAATCGTCGACGCCAGCCAATATGGCCATAAACTCAAGACAGCCA
CAGCAGCACCTATTGTGCCTTAGCTATGCCAGGAGTAGTGCTGCCCATCG
CTGGGAGCATGGGAAGAGCGCCCTTTGCGCTTATCGATCTCCACCTGGGA
CAACAATGAACGCTAGACAAGGAGGTGGCAAACGACGACGAGGTCGAGCG
AACGGCACAGGCACAGGAGTCGCTGTATCCGCTGTTAATAGCAGCATTAC
AGAGAGGCGTTCAGCTGTTTCGGAGGCAGTTCTTGCGGTTCAGCATGCTA
CTACTGAGGACGAGCTGCTGGCGGTTGCGCACAGCCACAGAGAGATTTTG
CGACCCGGTGTTCTCTCCCAGGCTCTTCTTCGGATCGCGAAGGACGAGCT
GCTGGCGGTTGCGCACAGCCACAGAGAGATTTTGCGACCCGGTGTTCTCT
CCCAGGCTCTTCTTCGGATCGCGAAGCCCCTCGTCCAGGTAGCCAAACGA
GCCGCACGGGAAAAATTTATCAAGGACCCGAGACTGTTAGACCTCTTCAT
GGCCGCGTCCGCGCCTGCAGCCGCAATGCAGGATCGCTCTGATGCGCAGT
CACCACGATCAAAGGGAGATGTCGCGGCTTACACGTCGGATGACCGCCCG
TTGCTTTCGGGCGCCCAAGCCGCCGACATTGTGTGGGCTTGCGGTTTGCT
TCAATGGCTCCCGGACGAAGGCGACCGCTTAGAGCATCTCCTGAAATTGA
TTGCCCTGGCCGCCGCGTCGCCGAGCGGTATCGATGGATGGCACGTCACG
AATGCCGTGTGGGCGCTCGACCGATTAGGCGGGTTCGCGCCAGAGATGGC
GCGCGCGGGGTTATGCCGTGGGCACAAGGCGGTTGAAGAGCTCCGCGAGA
AGATGGCTTCCCTTCCCTTTCGTGCGATACCGTCGATATTCGAAGGTCTT
CGCGTCGAAGACTTCAGAAACGAAGTGGACTTCGGCAGGGACGAGATCCT
GCTTGGCGGGGGGAAGCCCCTCGTCCAGGTAGCCAAACGAGCCGCACGGG
AAAAATTTATCAAGGACCCGAGACTGTTAGACCTCTTCATGGCCGCGTCC
GCGCCTGCAGCCGCAATGCAGGATCGCTCTGATGCGCAGTCACCACGATC
AAAGGGAGATGTCGCGGCTTACACGTCGGATGACCGCCCGTTGCTTTCGG
GCGCCCAAGCCGCCGACATTGTGTGGGCTTGCGGTTTGCTTCAATGGCTC
CCGGACGAAGGCGACCGCTTAGAGCATCTCCTGAAATTGATTGCCCTGGC
CGCCGCGTCGCCGAGCGGTATCGATGGATGGCACGTCACGAATGCCGTGT
GGGCGCTCGACCGATTAGGCGGGTTCGCGCCAGAGATGGCGCGCGCGGGG
TTATGCCGTGGGCACAAGGCGGTTGAAGAGCTCCGCGAGAAGATGGCTTC
CCTTCCCTTTCGTGCGATACCGTCGATATTCGAAGGTCTTCGCGTCGAAG
ACTTCAGAAACGAAGTGGACTTCGGCAGGGACGAGATCCTGCTTGGCGGG
GGGAAGGTTCTCTCTGAGTCGAGGCTGACCGCCTGGCAGAGCAGCGATGA
CTTACCCTTCGCGTACAGCGGCAAGGTGATGGAGCCTAAGCCATTCTCTC
CCAACGTGCTGCGTCTACGAGACGCTTTGTTCGAGAGGACTGGAGTGCTG
TACGACGGGGTGTTGCTGAACCTTTACGAGTCGAGGTTCTCTCTGAGTCG
AGGCTGACCGCCTGGCAGAGCAGCGATGACTTACCCTTCGCGTACAGCGG
CAAGGTGATGGAGCCTAAGCCATTCTCTCCCAACGTGCTGCGTCTACGAG
ACGCTTTGTTCGAGAGGACTGGAGTGCTGTACGACGGGGTGTTGCTGAAC
CTTTACGAGTCGAGCTCGAGCGCTATGCGGTATCACTCCGACCCAGACGT
GGGTACCGTCTGGACTCAAGACACTTCGGTCGTCTCCGTCGGAGATACGC
GCCAGTTCGTCCTGCGCGAGACGCTCGATTACTCCAGGCGCCACAACTTT
TACCTCTTCAGCGGGGACTGCGTCAGAATGACCGCCGGCTGCCAACGAGA
CTACCAGCACTGCATCAAGCTGGCCACAGAGGACGTAGGCCCTCGGATCT
CTCTCGTTTTCAAGCAAAGCATACGGTTGAACAAAAGTCGGGCTAAATCA
TGACTCGAGCGCTATGCGGTATCACTCCGACCCAGACGTGGGTACCGTCT
GGACTCAAGACACTTCGGTCGTCTCCGTCGGAGATACGCGCCAGTTCGTC
CTGCGCGAGACGCTCGATTACTCCAGGCGCCACAACTTTTACCTCTTCAG
CGGGGACTGCGTCAGAATGACCGCCGGCTGCCAACGAGACTACCAGCACT
GCATCAAGCTGGCCACAGAGGACGTAGGCCCTCGGATCTCTCTCGTTTTC
AAGCAAAGCATACGGTTGAACAAAAGTCGGGCTAAATCATGA
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