mRNA_F-serratus_M_contig902.20443.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: D8LTC5_ECTSI (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTC5_ECTSI) HSP 1 Score: 473 bits (1216), Expect = 2.190e-159 Identity = 276/458 (60.26%), Postives = 316/458 (69.00%), Query Frame = 3
Query: 204 MNARQGGGKRRRGRANGTGTGVAVSAVNSSITERRS-AVSEAVLAVQHATTEDELLAVAHSHREILRPGVLSQALLRIAKPLVQVAKRAAREKFIKDPRLLDLFMAASAPAAAMQDRSDAQSPRSKGDVAAYTSDDRPLLSGAQAADIVWACGLLQWLPDEGD----------RLEHLLKLIALAAASPSGIDGWHVTNAVWALDRLG-------------GFAPEMARA---------------------------GLCRGHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRR--HNFYLFSGDCVRMTAGCQRDYQHCIKLATEDVGPRISLVFKQSI 1418
M+AR+GG RRRGR +G+ A +++ E S A + A LAVQHA+ ED LL VA+SHR LRPG+LSQALLR+AKPLVQV+++ ARE + DPRL LF+AAS+PAAA + A+ A LSG QAAD+VWACGLLQWLP + RL L+ L+A AA+S GID HVTN +WAL+RLG E AR G+ G +AVEELR ++ +LPFRAIPS+FEGLRVEDFR+EV F RDEILLGGGKVLSESRLTAWQSSD LPFAYSGKVMEP FSPNVLRLRDAL+ERTGVLYDGVLLNLYES SSAMRYHSDPDVGT+WTQDTSVVSVGDTRQF LR TLD+S R H FYL SGDCVRMT GCQRDYQHC+K+A E+VG RISLVFKQSI
Sbjct: 1 MHARRGGKGRRRGRTGVSGSPRRAGAAANAVRETPSTAAALAALAVQHASHED-LLGVAYSHRAALRPGLLSQALLRLAKPLVQVSRQTAREAVLADPRLQALFLAASSPAAADGGETAAEP--------AAAGGTNQSLSGPQAADVVWACGLLQWLPADDXXXXXXXXXHRRLAQLVALVARAASSKVGIDDGHVTNVLWALERLGVSKSPAEKKRKRKACEAEAARGAETPIAAPGCGAKXXXXXXXXXXXXXXGVWEGDEAVEELRSRVENLPFRAIPSLFEGLRVEDFRDEVAFRRDEILLGGGKVLSESRLTAWQSSDGLPFAYSGKVMEPTSFSPNVLRLRDALYERTGVLYDGVLLNLYESRSSAMRYHSDPDVGTIWTQDTSVVSVGDTRQFALRRTLDHSPRGRHAFYLSSGDCVRMTDGCQRDYQHCVKVAKEEVGARISLVFKQSI 449
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A836CIU8_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU8_9STRA) HSP 1 Score: 228 bits (582), Expect = 4.250e-67 Identity = 131/275 (47.64%), Postives = 168/275 (61.09%), Query Frame = 3
Query: 633 AADIVWACGLLQWLPDEGDRLEHLLKLIALAAASPSGIDGWHVTNAVWALDRLGGFAPEMARAGLCRGHKAVEELREKMASL--PF----RAIPSIFEGLRVEDFRNEVDFGRDEILLGGG---KVLSESRLTAWQSSDDLPFAYSGKVMEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKL----ATEDVGPRISLVFKQSI 1418
A D +WA GLL P EG L L+A AA S + ++ VW+L R+G H +EL+ + +L PF R +P+ + VE EV+F RDEI LG G KVL ESRLTAWQS L F+YSGK M P+P +P V++LR+AL E TG LYDGVL+NLY + S MR+H DP G WT++T+VVSVG+TRQFV+R D++ RH FY+ SGDCVRM CQRD+QHC+K+ A GPR+S VFKQS+
Sbjct: 22 AVDALWALGLLGQPPSEGT----LKVLLARLAADASKLQPGQLSAIVWSLQRMGAE------------HLCPQELKRPLEALKLPFSVHQRLLPASWSN--VESIMQEVEFRRDEIRLGEGGVEKVLEESRLTAWQSCTGLSFSYSGKTMAPQPMTPTVIKLREALAEHTGQLYDGVLINLYMTPSVGMRFHQDPGQGEEWTEETAVVSVGETRQFVMRRVDDHADRHVFYVSSGDCVRMFGACQRDWQHCVKVEGGAAAAGGGPRVSFVFKQSM 278
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A6T6VXL3_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6VXL3_9EUKA) HSP 1 Score: 201 bits (510), Expect = 1.890e-55 Identity = 134/393 (34.10%), Postives = 196/393 (49.87%), Query Frame = 3
Query: 315 VSEAVLAVQHATTEDELLAVA--HSHREILRPGVLSQALLRIAKPLVQVAKRAAREKFIKDPRLLDLFMAASAPAAAMQDRSDAQSPRSKGDVAAYTSDDRPLLSGAQAADIVWACGLLQ----WLPDEGDRLEHLLKLIALAAASPSGIDGWHVTNAVWALDRLGGFAPEMARAGLCRGHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIK----------LATED---------VGPRISLVFKQSI 1418
++ AV +Q A DE+L+ H + + LSQ LLRI+K + ++ R K +++ R L + + + + A D++ + LL L D L+ +L ++ +DG +++N VWA LG P +A E+ + LPFR F L +E+ R EV F DE+ LGG KV+ E R TAWQ+S ++PF YSGK M P +P + +R+ ++ TGV YD L+NLY SSS MR+HSDPD G +W+ +T+VVSVGDTR F+LRET + +RH+FY+ SGD + M CQ YQH I+ +A E GPR+S+VFKQS+
Sbjct: 15 LTRAVHELQGARGPDEILSALSRHGYGSTYKMSHLSQGLLRISKFFIPLSAAKDRRKLVRECRYLHAW-----------------------EHVRKILESDAATNAQMATDLLLSMALLMDDSGMLEDTEALLDTARRLSRISDDEIRDLDGVNLSNLVWACRILGIDPPALAL--------------ERESLLPFRLHLQAFPELDIEEIRREVQFKTDEVKLGG-KVIRERRETAWQTSSNVPFRYSGKEMAPAAMTPIIQMVRNKIYNLTGVYYDCALINLYPDSSSGMRFHSDPDQGGIWSHNTAVVSVGDTRLFILRETWKHEKRHHFYVRSGDVMEMVRDCQEKYQHAIRTEESHKFTREMAVETSEFKPSKYTYGPRVSIVFKQSL 369
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A7S3Z587_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z587_9EUKA) HSP 1 Score: 183 bits (464), Expect = 1.050e-50 Identity = 99/208 (47.60%), Postives = 125/208 (60.10%), Query Frame = 3
Query: 876 LPFRAIPSIFEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKPFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKLATEDV---------------------------GPRISLVFKQSI 1418
LPF +F+ L V+ +EVDF +++ L G K LSE R TAWQSS + PF YSGKVM P PF+P V +RD +F+ TGV YD LLNLY +S MR+HSDPD G W+ +T+VVSVGDTR FV+RE D+S+RH FY+ SGD + M CQ+ YQH I+ V GPRIS+VFKQS+
Sbjct: 1 LPFTLKMGVFDNLTVDSLLDEVDFKTEQVELQG-KKLSERRQTAWQSSTNKPFRYSGKVMSPSPFTPLVQEIRDRIFKLTGVPYDCALLNLYPDGTSGMRFHSDPDQGIHWSTNTAVVSVGDTRLFVMREMDDHSKRHQFYVTSGDVLIMHGDCQQRYQHSIRTEEPGVRAAGVALDGSSSSSSSRSKHQRWSAALGPRISIVFKQSL 207
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A2K3DVE4_CHLRE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DVE4_CHLRE) HSP 1 Score: 176 bits (445), Expect = 4.480e-44 Identity = 105/260 (40.38%), Postives = 140/260 (53.85%), Query Frame = 3
Query: 693 LEHLLKLIALAAAS------PSGIDGWHVTNAVWALDR------LGGFAPEMARAGLCRGHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEVDFGRDEILL-GGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKP--FSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKL--ATEDVGPRISLVFKQSIR 1421
++ L+K A AA S P+ + H+ + VWA+ +G AP MA +PF +P GL+++DF EV RD I L G K + ESRLT WQS F YSGK M P P +P V ++RD L TGV YD VL+N Y MRYH DP G VW+ +++VVS+GDTR F+ RE DY+ R + + +GD VRM CQ QHC+++ A ED GPR+SLVFK+ +R
Sbjct: 387 VDQLVKATAAAATSSSQPQQPAPLSQQHLADLVWAVAHYDWGHCVGALAPAMA--------------------VPFAVVPQFMPGLKLQDFMAEVRLNRDVIYLEDGSKAVEESRLTGWQSDIGATFKYSGKEMVPDPSGMTPAVRKVRDELQRLTGVWYDSVLINYYGDGKCGMRYHVDPLYG-VWSPESAVVSIGDTRTFIFREISDYNSRWQYRVRNGDVVRMWGDCQDRLQHCVRVERAAEDAGPRMSLVFKERLR 625
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A835WWM2_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WWM2_9CHLO) HSP 1 Score: 172 bits (437), Expect = 3.480e-43 Identity = 97/201 (48.26%), Postives = 121/201 (60.20%), Query Frame = 3
Query: 834 GHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEVDFGRDEILL-GGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKP--FSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKL--ATEDVGPRISLVFKQSIR 1421
GH V L +MA +PF +P GLR+EDF EV RD I L G K + ESRLT WQS F YSGK M P P +P V ++RD L TGV YD VL+N Y MRYH DP G VW+ +++VVS+GDTR F+ RE DY R + + +GD VRM CQ QHC+++ A ED GPR+SLVFK+ +R
Sbjct: 391 GH-CVAALAPRMA-VPFTVVPQFMPGLRLEDFMAEVRLNRDTIYLEDGSKAVEESRLTGWQSDIGATFKYSGKEMIPDPSGMTPAVRQVRDELQRLTGVWYDSVLINYYGDGKCGMRYHVDPLYG-VWSPESAVVSIGDTRTFIFREITDYDSRWQYRVRNGDVVRMWGDCQDRLQHCVRVERAAEDAGPRMSLVFKERLR 588
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A8J5XM98_DIALT (Fe2OG dioxygenase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XM98_DIALT) HSP 1 Score: 165 bits (417), Expect = 3.270e-42 Identity = 122/371 (32.88%), Postives = 166/371 (44.74%), Query Frame = 3
Query: 336 VQHATTEDELLAVAHSHREILRPGVLSQALLRIAKPLVQVAKRAAREKFIKDPRLLDLFMAASAPAAAMQDRSDAQSPRSKGDVAAYTSDDRPLLSGAQAADIVWACGLLQWLPDE--GDRLEHLLKLIALAAASPSGIDGWHVTNAVWALDRLGGFAPEMARAGLCRGHKAVEELREKMASLPFRAIPSIFEGLRVEDFRNEV--DFGRDEILLG---GGKVLSESRLTAWQSSDDLPFAYSGKVMEPK-PFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKLATE--DVGPRISLVFKQSI 1418
+Q A E++ H L P S ALLR A L Q A R D + A A A + + + + A + A LL W D G + +L +A A +P + T WA +L P + ++A+LPFR + + + E E+ R+ I L G +++ E+RLT WQS +PF+YSGK M P P +RD L +G+ YD L+NLYE MRYH DPD GT+W+ DT V S G TR FVLR T D++ H F L GD V M CQ +YQHC+++ + D GPRISLVFKQS+
Sbjct: 28 LQRARAPAEIMRAVREHAGSLSPAAASFALLRAASALKQPRHDAERAAIAGSA---DTLLVARAVA-------------------------QGVTNASTAVIALRALALLGWRADRSTGAKAACVLDKLAARACAPGELTIAEQTAVEWAACKLHLTLP------------TPPTVSAQLAALPFRVLSGVCVAVPYETLEAELRPHLRRELIALRDSRGERLVPEARLTGWQSRAGVPFSYSGKSMAPNVPDGGQFAAVRDTLRALSGIEYDSCLVNLYEHGKVGMRYHQDPDQGTLWSTDTHVASFGCTRAFVLRRTADHALHHEFTLQHGDVVHMFGACQAEYQHCVRVERDEADAGPRISLVFKQSL 358
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A835TLQ1_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TLQ1_CHLIN) HSP 1 Score: 169 bits (427), Expect = 1.380e-40 Identity = 91/188 (48.40%), Postives = 114/188 (60.64%), Query Frame = 3
Query: 873 SLPFRAIPSIFEGLRVEDFRNEVDFGRDEILL-GGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKP--FSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKL--ATEDVGPRISLVFKQSIR 1421
++PF +P GLR+EDF EV RD I L G K + ESRLT WQS F YSGK M P P +P V ++RD L TGV YD VL+N Y MRYH DP G VW+ +++VVSVGDTR F+ RE DY R + + +GD VRM CQ QHC+++ A D GPR+SLVFK+ +R
Sbjct: 824 AVPFAVVPQFMPGLRLEDFMAEVALNRDVIYLEDGSKAVEESRLTGWQSDIAATFKYSGKEMIPDPSGMTPAVRKVRDELQRLTGVWYDSVLINYYGDGKCGMRYHVDPLYG-VWSPESAVVSVGDTRTFIFREIADYDSRWQYRVRNGDVVRMWGDCQDRLQHCVRVERAAADAGPRMSLVFKERLR 1010
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A250WY46_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WY46_9CHLO) HSP 1 Score: 157 bits (397), Expect = 6.240e-40 Identity = 83/185 (44.86%), Postives = 109/185 (58.92%), Query Frame = 3
Query: 876 LPFRAIPSIFEGLRVEDFRNEVDFGRDEILLGGGKVLSESRLTAWQSSDDLPFAYSGKVMEPK-PFSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKLATED-----VGPRISLVFKQ 1412
LPF+ P L+++ F EV +D I L G+ + E RLT WQS F YSGK+M P P SP + ++RD L + TGV +D VL+N Y+ MR+HSDP G WT T+VVS+G R+FV RET + R + + +GD V M CQ QHCIK+ ED +GPR+SLVFKQ
Sbjct: 128 LPFKFCPGYMRNLKLQSFLKEVQLQQDVIELHDGRRVEEPRLTGWQSDIGATFEYSGKIMRPSGPLSPEIRKVRDQLIDLTGVKFDSVLINYYKDGRCGMRFHSDPLYGC-WTSSTAVVSIGQARRFVFRETHNVQSRWEYTVKTGDVVFMFGDCQDRLQHCIKVEREDKGALEMGPRMSLVFKQ 311
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Match: A0A835Y532_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y532_9CHLO) HSP 1 Score: 146 bits (368), Expect = 2.490e-36 Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 3
Query: 969 GGGKVLSESRLTAWQSSDDLPFAYSGKVMEPKP--FSPNVLRLRDALFERTGVLYDGVLLNLYESSSSAMRYHSDPDVGTVWTQDTSVVSVGDTRQFVLRETLDYSRRHNFYLFSGDCVRMTAGCQRDYQHCIKLA--TEDVGPRISLVFKQSIR 1421
G + E+RLT WQS F YSGK M+P+ FSP V R+RD L+ERTGV YD L+N YE MRYH DP G WT +VVS+GDTR F+ RE DY R + + +GD V M CQ QHCI++ +D GPR+SLVFKQ IR
Sbjct: 108 GRPTAVEEARLTGWQSEIGATFKYSGKEMQPQDGGFSPAVSRVRDLLYERTGVDYDSCLINFYEDGKCGMRYHVDPLYGK-WTPHQAVVSLGDTRTFIFREISDYDSRWLYRVSNGDMVHMFGDCQDRLQHCIRVERRADDAGPRMSLVFKQRIR 261 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig902.20443.1 >prot_F-serratus_M_contig902.20443.1 ID=prot_F-serratus_M_contig902.20443.1|Name=mRNA_F-serratus_M_contig902.20443.1|organism=Fucus serratus male|type=polypeptide|length=482bp MNPHVLLLTILMGSSTCESSTPANMAINSRQPQQHLLCLSYARSSAAHRWback to top mRNA from alignment at F-serratus_M_contig902:256508..259742+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig902.20443.1 ID=mRNA_F-serratus_M_contig902.20443.1|Name=mRNA_F-serratus_M_contig902.20443.1|organism=Fucus serratus male|type=mRNA|length=3235bp|location=Sequence derived from alignment at F-serratus_M_contig902:256508..259742+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig902:256508..259742+ >mRNA_F-serratus_M_contig902.20443.1 ID=mRNA_F-serratus_M_contig902.20443.1|Name=mRNA_F-serratus_M_contig902.20443.1|organism=Fucus serratus male|type=CDS|length=2892bp|location=Sequence derived from alignment at F-serratus_M_contig902:256508..259742+ (Fucus serratus male)back to top |