mRNA_F-serratus_M_contig902.20428.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig902.20428.1
Unique NamemRNA_F-serratus_M_contig902.20428.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: D7FHY7_ECTSI (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY7_ECTSI)

HSP 1 Score: 724 bits (1868), Expect = 1.380e-255
Identity = 375/515 (72.82%), Postives = 412/515 (80.00%), Query Frame = 1 
Query:    1 MNSNVFDYLERLPPDALDTLYGK------DAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVS--SGDSRPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSPFLSSGGGISVGDTW----------TSGKKLIVVAPGIAGVLTEFI 1491
            M+ NVFDYLERLPPDALD LYG         G  SHGQWTCRA+LQSLPQLAKQHVMRL+FVE  V K +LKSWVKK+YQRVHAAS+RKL+SLR+LL SA GQEYQLNPPFRENL+RALC ++K PWQGDVPL+ADRSPPTV+KIERQMHSQWQDVLYFLVGSDEEGRS PPARVVKFMEESGLM+  RG GALRITDKGYEFMLKE HVQAW+VVHALINGYGRTQPGCRDELLAFLFQLSYCK+GDAYPLGALT TQRDLAQDFV+LGLLFKRKAKSTRFYPTSIA+NLIFGSS S  +G +      ++P          REDD ++ IIVETNFQV+AYTRSKLHFAMLSLFL+LR  LPN I+GAITRESMR+AL+TGIKGRQVLDFLK HAHPVVRRR+PVVPENIADQ        VLLWERERDRM   DGVL+DVS+AS D FR + EFAN  +GLLW+SP                           KKL+VV+PGI   L   I
Sbjct:   19 MSLNVFDYLERLPPDALDKLYGAAPPAADGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSAGGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGRGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAXXXXTQRKPQPAXXXXXXKREDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALSTGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQ--------VLLWERERDRMEHRDGVLVDVSYASRDAFRGMTEFANAKQGLLWSSPLGGEDXXXXXXXXXXXXXXXXXXLAGRKKLMVVSPGIVESLNAAI 525
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A6H5KJZ4_9PHAE (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJZ4_9PHAE)

HSP 1 Score: 506 bits (1303), Expect = 5.760e-172
Identity = 260/367 (70.84%), Postives = 283/367 (77.11%), Query Frame = 1 
Query:    1 MNSNVFDYLERLPPDALDTLYG------KDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKG------------------------------------------------YEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVS-----SGDSRPQQQPQQPGGV 924
            M+ NVFDYLERLPPDALD LYG      +  G  SHGQWTCRA+LQSLPQLAKQHVMRL+FVE  V K +LKSWVKK+YQRVHAAS+RKL+SLR+LL SADGQEYQLNPPFRENL+RALC ++K PWQGDVPL+ADRSPPTV+KIERQMHSQWQDVLYFLVGSDEEGRS PPARVVKFMEESGLM+  RGGGALRITDKG                                                YEFMLKE HVQAW+VVHALINGYGRTQPGCRDELLAFLFQLSYCK+GDAYPLGALT TQRDLAQDFV+LGLLFKRKAKSTRFYPTSIA+NLIFGSS S     +G    Q++PQ  GG+
Sbjct:   19 MSLNVFDYLERLPPDALDKLYGAAPPAAQGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSADGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGGGALRITDKGQEEAWNCSRGARGGSFLCLRGGVGRGGARVLSTSSMLEGAVYPRRTGLYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAGGGGAQRKPQPAGGL 385
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: W4FDT1_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDT1_9STRA)

HSP 1 Score: 323 bits (829), Expect = 5.720e-100
Identity = 192/470 (40.85%), Postives = 274/470 (58.30%), Query Frame = 1 
Query:   10 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFV-EAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFG-------SSVSSGDS-----RPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLW 1377
            N F++L  LP  ++D LY +DA       W C+A+ QS+  LA+Q VMRL+F  +       +  WV+   Q    A+I KL  LR+L  +    EY LNP F++ L++AL +   +PW+          P   +++E+    +W  VL+F+VGS     +APP  V+  +E +GLM+ ++    AL ITD GYEFMLK+ H Q WI V   +    R      +E+L FLFQ+SYC++ + Y +  LT  Q+ L  D V+LGLL++R AK+TRFY TS+A+NLIFG       SS++         RP + P  P   AA        DA + I+VETNF+V AYT+S LH AMLS+F+D+  RLPN+ +G +TRES+R AL+ GI   Q+ DFL  HAHP +   SPV+PENIADQ        + LW+RER+R+  + G L+D    +ED F  V++FA +   +LW
Sbjct:    2 NAFEFLGSLPGGSVDRLY-QDA-------WACQAVFQSMSPLAQQIVMRLLFTNQGSYSHDAILQWVQDPAQVKMTAAIEKLRHLRVLRMAHGTAEYVLNPVFQDQLKKALSSLGGSPWEAGRHKLPSEKPIAAAELEQYARKRWDAVLHFMVGST--AVAAPPPTVIGILEHTGLMQPSKTDARALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILSAEEMLQFLFQMSYCRMNEYYAVADLTRHQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFGGMLGQTRSSITMSQGLDHLHRPSKSPHLPPPTAAAA------DAHLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQ--------LYLWQRERNRIKFDAGELVDGFVTTED-FDVVLKFAQDVGVMLW 446
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: F0W5B1_9STRA (General transcription factor IIH subunit 4 n=2 Tax=Albugo TaxID=65356 RepID=F0W5B1_9STRA)

HSP 1 Score: 322 bits (825), Expect = 2.380e-99
Identity = 195/477 (40.88%), Postives = 272/477 (57.02%), Query Frame = 1 
Query:   10 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWV----------------KKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQ-GDVPLTADRSPPTVS-KIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSP 1386
            + F++LE LP   L++LY           W C+A+ QSLP LA+Q VMRL+     V + +L+ W+                 K    ++  SI+KL  LR+  QS+    YQL+  F++ L+ ALC     PW+ G   L  D      S ++ER   S W  VL+++VGS       PP  VV  +  + LM+ +    AL ITDKGYEFMLK+ H+Q WI +   I    RT    ++++L FLFQ+SYC++   YP+  LT TQ+ L  DF + GLL+++++ S RFY TS+AINLIFG + +S  S  Q        VA  R  +  D  T   IVETNF+V AYT S LH AMLS+F+D+  RLPN+ IG ITRES+R AL  GI  +Q+ DFL  HAHP +++ +P+VPENIADQ        + LWE+ER+R+   +G+L D  ++ E+ F QV E+A   R L W  P
Sbjct:    2 DAFEFLETLPNATLESLYADP--------WVCQAVFQSLPSLAQQFVMRLLSCNTVVQEQVLREWLVTQVQSDPGTSVGKEKAKSIDEIYQHSIQKLRKLRVFTQSSTDS-YQLHAGFQKQLKYALCHLGGCPWEVGRRKLGKDIEVSFASTELERYARSHWDAVLHYMVGSTSV--PDPPQAVVDILLRTNLMQASVDQRALHITDKGYEFMLKDIHIQMWIFILEYIKTLDRTGALKQEDILRFLFQISYCQVNAYYPVQDLTKTQQLLLTDFNNFGLLYRKRSNSDRFYTTSLAINLIFGGTTTSNYSETQ--------VARPRMSSMSDLLT---IVETNFKVYAYTTSTLHIAMLSVFVDIVARLPNLAIGFITRESLRSALVHGISAQQIYDFLLKHAHPRMKKNNPIVPENIADQ--------IYLWEKERNRIKFLEGILFDGFNSKEE-FEQVREYAQKQRFLTWTDP 447
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A836C856_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C856_9STRA)

HSP 1 Score: 321 bits (823), Expect = 8.040e-99
Identity = 196/456 (42.98%), Postives = 262/456 (57.46%), Query Frame = 1 
Query:  178 VDKSLLKSWVKKDYQRVHAASIRKLISLRILLQS-------ADGQEYQ-----LNPPFRENLRRALCTANKAPWQGD--VPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYC------------------------------------------KLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLW 1377
            + K LLK WV+  Y  VH A++R+L +LR+L+++       A  Q+ +     LNPPFR+NL +AL T + APW+ D    L  D+  P+ +KIE +M  +W+ VL+FLV SD  G    P+ V  FM+++GLM        L IT++GYEFML++ HVQAW+ V +LI     +    RD+LL+FLF LSYC                                          K+ + YPL ALT  Q  LA+DF+DLGLL++RK  S RFY T IA+NL+FG++ +   SR   Q       AA      +    + IIVETNFQVVAYT S LH AML+LFL+LR RLPN++IG ITRES+R+AL TGIK  Q+L+FLK HAHP V  R P++PENIADQ        ++LWERER R+  + G LLD+       F +V E+A      LW
Sbjct:   25 ISKDLLKGWVRDAYTGVHRAAVRQLSALRVLVRAQELSGAAAAAQQQRRGMIALNPPFRKNLLQALLTPDVAPWKDDPRFALRPDKLTPSRAKIEGEMRRKWEAVLHFLVASDGAGAGPTPS-VRAFMQQAGLMARRGRSEQLVITNRGYEFMLRDIHVQAWMFVLSLIRSKS-SDAQARDDLLSFLFMLSYCTVSAALQPLEGHHNAQSVCAAPSLSCKPLPAAPSASVNRCSEKVCEDYPLLALTPAQAQLARDFIDLGLLYQRKPSSQRFYTTEIAVNLVFGAAAAEHPSRAVIQ-------AADASAQLDLAPRMTIIVETNFQVVAYTTSDLHVAMLTLFLELRARLPNMVIGVITRESVRQALVTGIKASQILNFLKWHAHPNVINRRPMIPENIADQ--------IILWERERTRVKYDAGTLLDLPFEGVHDFDKVAEYAEELGACLW 463
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A024TBA0_9STRA (General transcription factor IIH subunit 4 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBA0_9STRA)

HSP 1 Score: 320 bits (819), Expect = 1.790e-98
Identity = 197/469 (42.00%), Postives = 274/469 (58.42%), Query Frame = 1 
Query:   10 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVE-AFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQ-GDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGS---------SVSSGDSRPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWN 1380
            N F++L  LP  ++D LY +DA       W C+A+ QSL  LA+Q VMRL+F   A      +  WV+   Q    A+I KL  LR+L       +Y LNP F+E L++AL +   +PW+ G   L A++  P V ++E     +W  VL+F+VGS     +APPA V+  +E + LM+ ++    AL ITD GYEFMLK+ H Q WI V   +    R      DE+L FLFQ+SYC++ + Y +  LT  Q+ L  D V+LGLL++R AK+TRFY TS+A+NLIFG          ++S G          P             D+++ I+VETNF+V AYT+S LH AMLS+F+D+  RLPN+ +G +TRES+R AL+ GI   Q+ DFL  HAHP +   SPV+PENIADQ        + LW+RER+R+  E G L+DV  A+ED F  VV+ A +   LLW+
Sbjct:    2 NAFEFLGSLPGGSVDRLY-QDA-------WACQAVFQSLSPLAQQIVMRLLFSNHATYAHDAILHWVQDAAQDKMTAAIEKLRHLRVLRVVQGSLDYVLNPVFQEQLKKALSSLGGSPWEAGRSKLPAEKPIPAV-ELELYARKRWDSVLHFMVGST--AVAAPPATVIGILEHTKLMQPSKSDSRALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILPADEMLQFLFQMSYCRMNEYYAVADLTRNQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFGGMLGQTRANMTMSQGLDHITNYAADPSKSRLPSASPARADSSLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQ--------LYLWQRERNRIKFEPGELVDV--ANED-FDAVVKHAEDMGVLLWH 448
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A6G0WGX7_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGX7_9STRA)

HSP 1 Score: 317 bits (813), Expect = 1.340e-97
Identity = 188/467 (40.26%), Postives = 259/467 (55.46%), Query Frame = 1 
Query:   10 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRP--------QQQPQQPGGVAAVRKGTREDDAT-VQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWN 1380
            N F+YL  LP  +LD LY           W C+A+ QS+  L++Q VMRL+F    V K  L  W++   Q    A+I KL  LR+L       ++ LNP F+E L+ AL +   +PW+          P   + +E+    +W  VL+F+VGS      APP  V+  +E + LMK +     AL ITD GYEFMLK+ H Q WI V   I    R      DE+L F FQ+SYC++ + Y +  LT  Q+ L  D V LGLL+++ +K+TRFY TS+A+NLIFG     G +R         +   QQ       R       A+ + I+VETNF+V AYT S LH AMLS+F+D+  RLPN+ +G +TRES+R AL  GI   Q+ DFL  HAHP +   SPV+PENIADQ        + LW+RER+R+  + G LLD    +ED F  VV++A +   L+W+
Sbjct:    2 NAFEYLGALPGTSLDRLY--------QDPWACQAVFQSMNPLSQQIVMRLLFTTTHVSKDALMHWIQDSAQSKMTAAIEKLCHLRVLRPVQGTNKFGLNPAFQEKLKTALSSLGGSPWEAGRKNLPPEKPIAAADLEQYARKRWDAVLHFMVGST--AVPAPPKEVIGILEHTRLMKPSETDARALHITDTGYEFMLKDIHAQTWIFVLNYIKDIDRKGILSADEMLQFFFQMSYCRMNEYYAVADLTRHQQQLLGDLVQLGLLYRKDSKATRFYTTSLAVNLIFGGMA--GQTRTNITMVQSLEAVHQQASSQVVPRPFASTSSASHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQ--------LYLWQRERNRIKFDAGELLDGFVTTED-FDSVVKYAQDLHVLMWH 447
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A485KU14_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU14_9STRA)

HSP 1 Score: 313 bits (802), Expect = 6.050e-96
Identity = 195/487 (40.04%), Postives = 275/487 (56.47%), Query Frame = 1 
Query:   10 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVE--AFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQ-------QQPQQPGGVAAVRKGTREDDATVQ---IIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSPF-----LSSGGGISV 1416
            N F++L  LP  ++D LY +DA       W C+A+ QS+  L +Q VMRL+F    ++  +SLL+ WV++  Q+    +I KL  LR+L      +E+ LNP F+E L++AL +   +PW+      A   P +   +E+    +W  VL+F+VGS      APP  V+  +E + LM+ +     AL ITD GYEFMLK+ H Q WI V   I    R      +E+L FLFQ+SYC++ + Y +G LT  Q+ L  D V+LGLLF++  K+TRFY TS+A+NLIFG  +  G +R         +Q     G    +       A      I+VETNF+V AYT S LH AMLS+F+D+  RLPN+ +G +TRES+R AL  GI   Q+ DFL  HAHP +   SPV+PENIADQ        + LW+RER+R+  + G LLD    +ED F  VV +A +   LLW+        +S  GG +V
Sbjct:    2 NAFEFLATLPAASVDRLY-QDA-------WACQAVFQSMEPLGQQIVMRLLFTSQVSYSQESLLE-WVQEPAQQKMIHAIEKLSHLRVLRVVKGQREFVLNPVFQEQLKKALSSLGGSPWEAGRQKLAAEPPISALDLEQYARKRWDAVLHFMVGST--AVPAPPPTVIGILEHTRLMQPSSSDARALHITDTGYEFMLKDVHAQTWIFVLEYIKDIDRRGILSAEEMLQFLFQMSYCRMNEYYAIGDLTRNQQQLLGDLVELGLLFRKGTKATRFYTTSLAVNLIFGGVL--GQTRTSISMVQSLEQVHSASGQQLTKGAVPRPVAVAAHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQ--------LYLWQRERNRIKFDAGELLDGFVTTED-FDTVVNYAQDLDVLLWHDAIHLRLVVSKAGGAAV 466
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: D0NRC9_PHYIT (General transcription factor IIH subunit 4 n=21 Tax=Phytophthora TaxID=4783 RepID=D0NRC9_PHYIT)

HSP 1 Score: 311 bits (798), Expect = 3.170e-95
Identity = 191/480 (39.79%), Postives = 268/480 (55.83%), Query Frame = 1 
Query:   10 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWV------KKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQ-GDVPLTADRSPPTVS-KIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQQPQQPGGVAAVRKG------------TREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSP 1386
            + FD+LE LPP  L+ LY           W C+A+ Q+LP LA+Q VMRL+   + V + LL+ WV       K       A+++KL  LR+ +Q   G  Y+ +P F++ L  AL     +PW+ G + L  D      +  +ER   ++W  VL+++VGS       PP  VV  +  + L++ +     AL ITD GYEFMLK+ HVQ WI +   I     T    ++++L FLFQ+SYC+ G  Y +  LT TQR L  DF+D GLLF+++  S RFY TS+A+NLIFG S      + +         A VR G            T +  A + ++VETNF++ AYT S LH AMLS+F+D+  RLPN+ IG ITRES+R AL  GI  +Q+ DFL  HAHP +RR SPV+PENIADQ        + LWERER+R+   +G+L D  +  ED +  V ++A     L W+ P
Sbjct:    2 DAFDFLETLPPATLERLY--------QDPWACQAIFQALPSLAQQFVMRLLPTNSAVPRDLLEQWVVPIPGETKRMPPQFNAALQKLEGLRVFVQQDGG--YKPHPTFQKQLMYALSNLGGSPWERGRLHLPRDPENTFAAVDLERYARARWDLVLHYMVGST--AVQEPPQSVVDILLRTKLLQASGADSRALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGGYYAVADLTETQRLLLGDFIDFGLLFRKRQNSDRFYTTSLAVNLIFGGST----GQKRSHVSLTSSFAGVRAGMKSQVADPRQAPTVDHGARLLVVVETNFKIYAYTSSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNSPVIPENIADQ--------IYLWERERNRVQFLEGILFDGFNTKED-YESVRDYAKGLMVLTWSDP 456
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BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: H3GUR6_PHYRM (General transcription factor IIH subunit 4 n=3 Tax=Phytophthora TaxID=4783 RepID=H3GUR6_PHYRM)

HSP 1 Score: 309 bits (792), Expect = 3.170e-94
Identity = 194/490 (39.59%), Postives = 277/490 (56.53%), Query Frame = 1 
Query:   10 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWV-------KKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENL---------RRALCTANKAPWQ-GDVPLTAD-RSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQQPQQPGGVAAVRKG------------TREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSP 1386
            + FD+LE LP   L+ LY           W C+A+ Q+LP LA+Q VMRL+   A V ++LL+ WV       K+   + HAA + KL  LR+ +Q  DG  Y+ +P F++ L           AL     +PW+ G + L  D  +    + +ER   ++W  VL+++VGS       PP  VV  +  + L++++     AL ITD GYEFMLK+ HVQ WI +   I     T    ++++L FLFQ+SYC+ G+ Y +  LT TQR L  DF+D GLLF+++  S RFY TS+A+NLIFG S      + + Q       A VR G            T +  A + ++VETNF++ AYT S LH AMLS+F+D+  RLPN+ IG ITRES+R AL  GI  +Q+ DFL  HAHP +RR +PV+PENIADQ        + LWERER+R+   +G+L D  ++ ED +  V ++A + + L W  P
Sbjct:    2 DAFDFLETLPTATLERLY--------QDPWACQALFQALPPLAQQFVMRLLPSNAAVPRALLEQWVVPEPGDAKRMPPQFHAA-LHKLEGLRVFVQQ-DGA-YRPHPTFQKQLMVKKYEQCYHYALSNLGGSPWERGRLQLPKDPENTYAAADLERYARARWDSVLHYMVGST--AVQEPPQSVVDILLRTKLLQSSGADSRALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGEYYAVADLTETQRLLLGDFIDFGLLFRKRPTSDRFYTTSLAVNLIFGGST----GQKRSQVSLTSSFAGVRAGVKSQVADPRHAPTADHGAQLLVVVETNFKIYAYTTSTLHVAMLSVFVDIVARLPNMAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNTPVIPENIADQ--------IYLWERERNRVQFLEGILFDGFNSKED-YESVRDYAEDLKVLTWMDP 465
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHY7_ECTSI1.380e-25572.82General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A6H5KJZ4_9PHAE5.760e-17270.84General transcription factor IIH subunit 4 n=1 Tax... [more]
W4FDT1_9STRA5.720e-10040.85General transcription factor IIH subunit 4 n=1 Tax... [more]
F0W5B1_9STRA2.380e-9940.88General transcription factor IIH subunit 4 n=2 Tax... [more]
A0A836C856_9STRA8.040e-9942.98General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A024TBA0_9STRA1.790e-9842.00General transcription factor IIH subunit 4 n=2 Tax... [more]
A0A6G0WGX7_9STRA1.340e-9740.26General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A485KU14_9STRA6.050e-9640.04General transcription factor IIH subunit 4 n=1 Tax... [more]
D0NRC9_PHYIT3.170e-9539.79General transcription factor IIH subunit 4 n=21 Ta... [more]
H3GUR6_PHYRM3.170e-9439.59General transcription factor IIH subunit 4 n=3 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig902contigF-serratus_M_contig902:58344..66712 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score729.9
Seed ortholog evalue7.8e-208
Seed eggNOG ortholog2880.D7FHY7
Preferred nameGTF2H4
KEGG rclassRC00055,RC00523
KEGG koko:K01873,ko:K03144
KEGG ReactionR03665
KEGG Pathwayko00970,ko03022,ko03420,ko05203,map00970,map03022,map03420,map05203
KEGG ModuleM00290,M00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000109,GO:0000112,GO:0000428,GO:0000438,GO:0000439,GO:0000717,GO:0000988,GO:0000990,GO:0000991,GO:0001109,GO:0001111,GO:0001112,GO:0001113,GO:0001120,GO:0001671,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005675,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009452,GO:0009628,GO:0009889,GO:0009987,GO:0010224,GO:0010467,GO:0010468,GO:0010556,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016591,GO:0016604,GO:0016607,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022607,GO:0030234,GO:0030880,GO:0031323,GO:0031326,GO:0031334,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032774,GO:0032781,GO:0032806,GO:0032991,GO:0033554,GO:0033683,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0036260,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043462,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051252,GO:0051276,GO:0051336,GO:0051345,GO:0051716,GO:0055029,GO:0060255,GO:0060589,GO:0060590,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070816,GO:0070911,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090575,GO:0097159,GO:0097659,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902494,GO:1902554,GO:1902911,GO:1903506,GO:1990234,GO:1990391,GO:2000112,GO:2001141
EggNOG free text desc.Helicase conserved C-terminal domain
EggNOG OGsCOG5144@1,KOG3471@2759
Ec32 ortholog descriptionTranscription factor TFIIH subunit p52/Tfb2
Ec32 orthologEc-12_006390.1
EC6.1.1.9
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03021,ko03400
Exons9
Model size2048
Cds size1506
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig902.20428.1prot_F-serratus_M_contig902.20428.1Fucus serratus malepolypeptideF-serratus_M_contig902 58886..66712 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932633.147416-UTR-F-serratus_M_contig902:58343..588851622932633.147416-UTR-F-serratus_M_contig902:58343..58885Fucus serratus maleUTRF-serratus_M_contig902 58344..58885 -
1690964395.9725487-UTR-F-serratus_M_contig902:58343..588851690964395.9725487-UTR-F-serratus_M_contig902:58343..58885Fucus serratus maleUTRF-serratus_M_contig902 58344..58885 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932633.208344-CDS-F-serratus_M_contig902:58885..591461622932633.208344-CDS-F-serratus_M_contig902:58885..59146Fucus serratus maleCDSF-serratus_M_contig902 58886..59146 -
1690964395.9934459-CDS-F-serratus_M_contig902:58885..591461690964395.9934459-CDS-F-serratus_M_contig902:58885..59146Fucus serratus maleCDSF-serratus_M_contig902 58886..59146 -
1622932633.2318208-CDS-F-serratus_M_contig902:59578..598301622932633.2318208-CDS-F-serratus_M_contig902:59578..59830Fucus serratus maleCDSF-serratus_M_contig902 59579..59830 -
1690964396.0067096-CDS-F-serratus_M_contig902:59578..598301690964396.0067096-CDS-F-serratus_M_contig902:59578..59830Fucus serratus maleCDSF-serratus_M_contig902 59579..59830 -
1622932633.2537127-CDS-F-serratus_M_contig902:60190..602381622932633.2537127-CDS-F-serratus_M_contig902:60190..60238Fucus serratus maleCDSF-serratus_M_contig902 60191..60238 -
1690964396.0174387-CDS-F-serratus_M_contig902:60190..602381690964396.0174387-CDS-F-serratus_M_contig902:60190..60238Fucus serratus maleCDSF-serratus_M_contig902 60191..60238 -
1622932633.2694862-CDS-F-serratus_M_contig902:60591..608191622932633.2694862-CDS-F-serratus_M_contig902:60591..60819Fucus serratus maleCDSF-serratus_M_contig902 60592..60819 -
1690964396.027406-CDS-F-serratus_M_contig902:60591..608191690964396.027406-CDS-F-serratus_M_contig902:60591..60819Fucus serratus maleCDSF-serratus_M_contig902 60592..60819 -
1622932633.2895913-CDS-F-serratus_M_contig902:61247..613831622932633.2895913-CDS-F-serratus_M_contig902:61247..61383Fucus serratus maleCDSF-serratus_M_contig902 61248..61383 -
1690964396.0405674-CDS-F-serratus_M_contig902:61247..613831690964396.0405674-CDS-F-serratus_M_contig902:61247..61383Fucus serratus maleCDSF-serratus_M_contig902 61248..61383 -
1622932633.3112438-CDS-F-serratus_M_contig902:61992..621281622932633.3112438-CDS-F-serratus_M_contig902:61992..62128Fucus serratus maleCDSF-serratus_M_contig902 61993..62128 -
1690964396.0636265-CDS-F-serratus_M_contig902:61992..621281690964396.0636265-CDS-F-serratus_M_contig902:61992..62128Fucus serratus maleCDSF-serratus_M_contig902 61993..62128 -
1622932633.3346922-CDS-F-serratus_M_contig902:62437..625161622932633.3346922-CDS-F-serratus_M_contig902:62437..62516Fucus serratus maleCDSF-serratus_M_contig902 62438..62516 -
1690964396.0813694-CDS-F-serratus_M_contig902:62437..625161690964396.0813694-CDS-F-serratus_M_contig902:62437..62516Fucus serratus maleCDSF-serratus_M_contig902 62438..62516 -
1622932633.3655624-CDS-F-serratus_M_contig902:62988..631051622932633.3655624-CDS-F-serratus_M_contig902:62988..63105Fucus serratus maleCDSF-serratus_M_contig902 62989..63105 -
1690964396.0918462-CDS-F-serratus_M_contig902:62988..631051690964396.0918462-CDS-F-serratus_M_contig902:62988..63105Fucus serratus maleCDSF-serratus_M_contig902 62989..63105 -
1622932633.3882616-CDS-F-serratus_M_contig902:66463..667121622932633.3882616-CDS-F-serratus_M_contig902:66463..66712Fucus serratus maleCDSF-serratus_M_contig902 66464..66712 -
1690964396.100808-CDS-F-serratus_M_contig902:66463..667121690964396.100808-CDS-F-serratus_M_contig902:66463..66712Fucus serratus maleCDSF-serratus_M_contig902 66464..66712 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig902.20428.1

>prot_F-serratus_M_contig902.20428.1 ID=prot_F-serratus_M_contig902.20428.1|Name=mRNA_F-serratus_M_contig902.20428.1|organism=Fucus serratus male|type=polypeptide|length=502bp
MNSNVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHV
MRLIFVEAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQ
LNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDV
LYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKGYEFMLK
ETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALT
LTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQ
QPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLD
LRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVV
PENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEF
ANNARGLLWNSPFLSSGGGISVGDTWTSGKKLIVVAPGIAGVLTEFIERA
L*
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mRNA from alignment at F-serratus_M_contig902:58344..66712-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig902.20428.1 ID=mRNA_F-serratus_M_contig902.20428.1|Name=mRNA_F-serratus_M_contig902.20428.1|organism=Fucus serratus male|type=mRNA|length=8369bp|location=Sequence derived from alignment at F-serratus_M_contig902:58344..66712- (Fucus serratus male)
ATGAACAGCAACGTCTTCGACTATCTGGAGAGGCTGCCTCCAGATGCTCT
TGATACTCTGTACGGGAAAGACGCCGGCTCGAGCAGCCACGGCCAATGGA
CTTGCAGGGCAATGCTGCAGTCGCTGCCGCAGCTGGCAAAGCAGCACGTC
ATGCGCTTAATTTTTGTGGAGGCCTTCGTGGATAAAAGTTTGCTCAAGTC
TTGGGTGAAGAAGGATTACCAGCGGGTGCACGCCGCTTCAATCCGCAAGG
TGTTGGGGATGTGGTCGCTTCTTGTGTCTTACTCCGTACCTGGTATGATC
CTTTCTCGTCAGGAATTGACCCGCCGTCGTAGAGCAGAGAGGTGAATCAC
GAGAGCATCCAGGGCACTGCGATTGTACAGACGGTTTGGAGGAAATTTAT
AGAATCTGTTGAGGTGATGGGCCCGGGCAAGCAGATCTGGAGGAAATTTA
TAAAAGCTGTTGAGGTGATGGGCCTGGATAAGCTGATCGTAGTGCTCGGC
TGTTTGCGATTGAGTACATGTGCGTATCATGTCTCCAGTTGTGGCGGTTT
TTGTGCGCGCTTCAGCAAACACCTGCCCCTTCTATCCTTTCATATAGACT
ATTAATATACGTAATGTTATACTATTCATAGTAGTGTGTAGTAGATCTTC
TCAGCATCCCCCAGTCAGGGAGAAAATGTCAAGGCGTTTAGGTGGGATCA
TAGGCAGCGAAGACAAAACCTCTTCTTGGCATTTAAACGGGTTCTCCGAT
GGTAGTAACATTGTGTCAACAGTATAATGTCGGGGAGAGCCCACCGTTAT
ACTGTACACTTACATAAATCGCCAGGTCATACGCCGGTGCTTTCAACATG
CCCACTTCATACCAATAGTGATTGGGTGCGGGAAAGAGAGGCGAATATTA
ATTGGTCCATGGTGACCTGCCAAGCCAGCACTCGTTCGGAACTACCTTGA
GGTTTAATGGCCCCGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTA
CGAAATCGCGTATGGCGTATGGCGACTTTTAAATAAATAAATGGACGCCG
CCGCCGAACTCGGGAGGAATTCCGTCAGTAAAGCACCATATTCAGCCTGA
GTATGGAGATGAGCAGGCTGACGCGGGACGGGATTGCCTAACCCGTCTCG
CGAGACCAAATTCTCGAGCACGAACGTGGACAGGGAAATTTTCACTTTTC
CTGTTCAGTTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCAT
ACGCTTGCTATATGTGTGACCATACATATGACGCCGCCGCGGAACTCGGG
AGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCA
GGCTGGCGCGGGACGGGACACCCGTCTCGCGAGACCAAATTCTCAGGCGC
GAACGGGGACAAGGATAAATATCATTTTCCCTGTTCAGCTTAAAACGAGC
AGAATTGGCAACCTTACCCGGTTGATCTGTACTCTCTACTATAAGCCATA
CGTACATAACTCACTGCAACTAACGCAGTCTGTAGCTCTATTAACAAATT
ACTTCTACTGGAGTAAGGAGGTTCGATGAACCGTTTTGACATTGGTCGGT
GCCAGGTGCTATTGCTTGTAAAGTGTCGCATAACTTGTCTTGGTGGAAAC
CCCCGATAATAACAGCTAGAAATATTTCTTGTGATCACTTTTGATGACTT
TGTTGGATGGGCAGTAGCACACCAGGCAGTCTTCTGTGTAGCTTGTACTT
CAGATTCTGAAATTACTAGCAGCACTCCAGACAGTAGAACATGCTGTAGT
TCGTACCCAAAGACATCCACTTGACGCCGATAAGTTTCCGATGTCCTCGG
TTCGTTGGACCTGGCTAGGCTAGGACTTTGTCGCTACATTATTTGAATTT
GAATCCCTCTTGGTCTGAGTAGCGGGTTGTTACCATGATGTGACCTGTTG
ACCTTGGTACCTCTTTGTGACCACAAGCGGGATTGGCATTTGATACGCCA
TAGTCTATCGCTGACTTGGCTGACTTGAATGATGCGAATCAACAAAGAAT
TTTCTTTAAATAAAACAGCTGCTGCATTATATAATTGTACGAGACCAAAT
TCTCAGGCACGCACGGGGACAGGGTAATATTTATTTTCCCTGTTCAGCTG
ACCACGAGCAAAATTGGCAACCTTACCCGGTTGATCCATACTCTTGCTAT
ATGTGACGACCATATACAGTGCCATACCCCGGTGGTACGTTGAGCACTCT
CGAATGGATCAACCAACGGCTAGGCGTCCGTAACTTGCATGGGTACAAAA
AAAAGTCGTAGGCGGGAGAGATGGGTTGGTCCTTACTTGACATTGAGGTA
CGGGAGGTGAGTTGGTAACCTGACACGGTTGGTTGTCCCTGTAGACTGAG
TAAAAAGTCATAATCTCAACTCCCCTCCAGTAACTACTATAATACCAATA
ATGATAGTACTAACACAGTATAACATCAGTACTCGTTGTCTGTAGCTACT
TGTACAGGCTCTAGCTGTAGAGCTGTAGAGCTCTAAACTTAAGCACTAGT
TCAGAGTTTGGTCCGATATGTCCGATGTCCAAAAGTGCTCTTTTCCCCAG
TTCCGTGGGAGGAGTGGCTACAGGTTTCCGAAATTTTGGTTTGAAAAGCG
TTTAGTGAGGTTGGACAGAGATCCCAGCGAACTACAGGCATTACCCACGA
TGATTGCCGCCGTTAAGAAGGTACAGTTCGGAGTGCTACTTACATAATAT
TTTCAGCGTGTGTTACGAGGAAAACATGTCAAGAGAGTACGGTAGCTCAA
GGGCCTGCCTCACGGCTCACCGCCGTCCTCAGACAACTGAAAGGGGCCGG
GCTTATCGTACGCGAGCATCATCCAGCCACGAGTACAATGTGCTCTGCAC
AACATGAAACTTTTCCTGAGCTCGGTCGCATTTTGTGAGGCACACCTTCC
ATTCATCTACATACATTTCAACATGCCCACTTCATACCAATAGTGGGTGT
GGGAAAGAGAGGCGTATATTAATTGGTCCATGGTGACCTGCTGAGGCAGC
ACTCGTTCGGAACTACCTTGAGATTACTGGCCCTGCGCCGGCGGACTCTC
GGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAAACTCGGGAG
TTACCCGATTGCGTATGGCGGTTTAATATAAATGTATGGACGCCGCCGCG
GAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGAGTATGG
AAATGAGCAGGCTGACGCGGGACGGTACTGCCGAAACCGTCTCGCGAGAC
CAAATTCTCAGGCACGAACGCGGACAGGGGAATATTTTATTCCCTGTTCA
GCTGACCACGAGCAGGATTGGCAACCTTGCCAGGGTGATACATACTCTTG
CTATATGTGTCACCATACATACACACATATACAGGAGTCTAGACGTCTTC
TTTAACACTGCTTTGGCCCACGAAAAACTCGTTTTCGTTGCGGTTTGGTG
CCCAACCGCCTCCTCAGGTGGTACCTGAACGACGACCCCCTTTTCATAAC
GCTCACTTTGTGTCGATCCTTTGGCCACCGCTCCGTGCGCTCGATTTATT
TCGTCAGCTGATCAGCCTGCGAATTCTTTTGCAGAGCGCGGACGGGCAGG
AATACCAGCTGAACCCCCCCTTTCGAGAAAACCTCCGGCGGGCGCTCTGC
ACGGCGAACAAAGCTCCCTGGCAGGTAGGTACCCACAGCTGATCGCGATG
GATGCCGACAATTCTCCGCATGATCGCGAGACTTTTCGCTGCCGCTCCGT
TGGGAGAGATGAGATGACCTGTTGTTGGTGCCCTCGCGCGCGCTGCGGCG
TTTTCGTTTCTCTCCACCTAACCTGTACACAAATATTCGTGTTTTATTTT
TTAATAGTAAGTGAATGGTTTCTTGGAAGAGGTGAAAGAGTTTTGTTAAT
AGTTACCCATACTCTGCGATGTTCCTCACCGGGTACATAGTTAGGCGATG
CATTCGTACCGGAGTGACATAGCGCTCGGAAACGCCGAGGGAAAGGCTTC
GACGGGGTAAGTTTGTTGCCGTCAAGTCAAGGGTTTGTGGTGCTGGCTTC
TGCCGCACAGTTGGAGGCGGTACATATAGGTCCCAAAGAGTCTGAGCATC
ACTCGACCTCTCTTCCCTGTGAATGTGTTCTTGGTCGGGGTCGAAGGGGG
ATGTTCCGTTAACGGCAGACAGGAGCCCCCCGACCGTGTCAAAGATCGAG
CGTCAGATGCACTCGCAGTGGCAAGGTGAGGCAAAAGCATCATAGAGTGC
GACGTTCCCTCCGTCCAGATCTCGCCTATCACGCGATTGCCGGGGCACGG
TTTGCCCCCCCCCCTCCCAGCAAAAACATTTTACAAACCCTCATCGCGGT
CGATCGTTGCCGGGGCTCAGTTTGCCTCCCCCTCCCCCCCCCCAACAAAA
ATACTTTACGAACCCCCATCGTGGTCGATCGTCTGCCATCGCTGCACGTT
TCGCTCACGCGCCTTCCTTCTCAAGTGTGATTTTTTTCGATTCCTCGCGC
GGCTGGATCGCCCTGCCCTCCCCTCCCGCCGCAGACGTATTGTACTTCCT
GGTGGGGTCAGACGAAGAGGGGCGAAGCGCACCGCCTGCCCGGGTGGTGA
AGTTCATGGAGGAGAGCGGCCTGATGAAGACCACCAGGGGCGGGGGTGCT
TTGCGCATCACCGACAAAGGGTGATCGATCCACGGGTGCTGCCCTTGCCC
CCACCCCCACCCCCCACCCCCGACAGGAGACTTACTGCAGTATAGTAGCG
TTCCTGATAACGTTCGATAGCCGTTTTTCTTTCGTGAGCTTTCATGTATA
TGTATTATAGTGTTAATCATGGTGTGCAATAGTTGCACGTGAGGAGTACG
TTACTCTCGGAACAAGTAATTCAAGTTGTGTAAAATCGATCGACTCCTCG
GCTTCGCGATAGGGCCGTAGTAAACCATACCGTAAACAAAGGCGTCGAGT
TTCCATAAACTATGGTGAAGAAGTACTGGGACTCTATGGTCGTGTGTGTG
TGTGTGTGTGTGATAGCATCGCGCGATTGAACGAAGCGCCATTTTGTTCT
TGGTGGGGAGCTGGGAGGAGTTTCTCATTTGTGCGTCGTTCCGACGCGGC
GACCGACATCTCCTGACTCGAAGTCTGTTTTATCCGCCTTGTTGAGTTTC
TCGAAATCAGTACTAGGAAGAACAAGAAATCCTTTTCATTGCGTGCCGTG
CCTGTCCGCCTCGTACGCGTGGTCCTCCGAACTTCACCCCCCCCCCCCCC
GTTTTTTTATTCTCTCGACGTCGACGAAGATACGAGTTTATGCTGAAGGA
GACCCACGTCCAGGCGTGGATAGTGGTCCACGCGCTCATCAATGGGTACG
GCAGGACGCAGCCTGGTTGCCGGGACGAGCTGCTCGCGTTTCTGTTCCAG
CTGAGCTACTGTAAGGTAAGCTTTTATGTGTAATTCCTCTTCCCGCTGCT
CGCTAGGGGGTTTTGCCCGCAGCTCGCTCCTCTACTCGTATACAGTAGTT
TTTTTTCTATCTTGATGCATGAATAGCAATAGCGAACGAAGCTCGCGAAT
AGCGCGGGAAGGGCGATGCTGGTGCGTGACAGGTGGCACACGAGCTTGTT
CTCAATTTAACTCGAAACCGTTTTGTTACGATGGCTGTAGCAGTCGATGA
GCGGGTGCGCGGACTATACCAAAATTAAAGCATGATGTTTTTTTTTTGTC
AGCTGTAGCATCGCCATCGCCATGGTGGGCTCCTCTCCAGCAACTATTTT
TTTTGTCAATCCCGGGGCGTTTCTCCGCGGAGTAACCGCTGGAAAATTCC
CCTCTTAACGCTCAAAGCGCACACACTCCTCTGCTCCATACAGCTGGGAG
ACGCCTACCCTTTGGGAGCCCTGACATTGACCCAGCGCGACCTCGCCCAG
GACTTCGTAGACCTCGGCCTTCTATTCAAGAGGAAGGCGAAGTCGACGCG
ATTCTACCCGACGTCCATCGCGATCAACCTCATCTTCGGTTCGTCCGTGT
CCAGCGGAGATAGCCGGCCTCAGCAACAGCCGCAGCAGCCTGGGGGCGTA
GCTGCGGTAAGGAAGGGTACAGTATAAAGATAGAGAGATGATGTGGCAGG
TTGTATTAGAGGGGAGTGGGGGGGGGAAGCGCGGTGACAAGCAGCGTTCC
GTTAGCTTTGGTGGGATGGGATAGCTCTGGCACTTCCATGATCGGTATGG
GTGTATGTGTGTGTGGGTGTGGGTGATCGTTTCTCCCTTGGCGTGTCGAG
CGAAGATCACCTCGAAACGTTTCTCTCTCTCTGTTTTGACGCGCTTTGCT
CGGCACCCGCGTTGCTGCCTTCCCTTTCTGTAACCGCACCCCCCCCCCTC
CAACGCTGGGTCGTGCCGATGACCGTGACTGTTGGCTTTTGTCTGTTGCT
CGTGGGGGTTGTCGGTGCGTGAAGCGGGAGGATGACGCCACGGTTCAGAT
CATCGTCGAGACCAACTTTCAGGTGCGTGCGTACGCTGGACAAGTCTTGA
AGCTGTCGATAGAGCTGTACGTACGAGTTGGCTGTTTTGGTTATGTATAA
TTCTTATTCTGTTTTGCTGTGAAAGAGCGATTCGCGTGCTACTCTCCTTC
CTCTATCTCTTGCGATCTTCAGATTCTGCATCTTATTTGGTTCGTAGTGT
CACGGGCGATACAGTAGACGGTGTTCGTTGACAGTGTACCACCTAAAGTA
AGGAAGGGTTACCGGGGTGGGGGGGGGGAGAAGTTGATGTTGATTCGTTT
CTGTCCAGCCTTTTTTCAACGATTCTGTTCCACCACTGCGATACCCAGCC
TGTTCTTTTGACGTCATCGTCGTTGTTAAAAGGTGGTGGCGTACACGCGA
TCAAAGCTGCACTTCGCGATGCTCAGCCTGTTCCTCGACTTGCGCACGCG
GCTCCCGAACGTGATCATCGGGGCGATCACGAGGGAGAGCATGCGGAGGG
CCTTGGCCACGGGGATCAAGGGGCGACAGGTCCTGGACTTCTTGAAATGC
CACGCACATCCCGTTGTAAGAAGGCGTTCTCCGGTGGTACCCGAGAACAT
CGCCGACCAGGCAAGCGATTTCTCCTGCGGCTCGGTGGTCGCAGTACGTT
TGAATTTCCCTCTCGTCGGCCGTCGATTCATCTCCCAGACGTATATCAAG
AGAAAAGTGTAACTTACTTCCGTGTTTGGTTTGCGGTCGGTCATCTCTCG
CCGACTTGAGCCACACTTGTCGGAACGGCAAGCTTGGAGCCTATGGAGTG
CTCGACCGCGTGAGGAGAAACCTCCGAACGGTACGCGCGTTGTTTTTTTT
CGAAGCCGCGAATGCGTTTGAGCCGCATTTTGTTTGTTCTGTTATCACGC
TGCCCAACGAAAACCTTTCGCTGTGAAGAACCCCGCACGTTCACCTCGAG
TTTACTCTTGAAACCACCGTGAACTTCCTTCGTTGCTGGCCGTTCGAGGC
ATACATATACAGTACAAAATACATACACATGATCCGGCTTGAATGCTCGC
GCGCCCTCTTCTGTAGGTTTTGCTGTGGGAACGGGAACGAGATCGCATGA
TTAAGGAAGATGGGGTGCTTCTGGATGTGTCACATGCGAGCGAAGATACT
TTCCGGCAAGTCGTTGAGTTCGCCAACAACGCGCGGGGGTTGTTGTGGAA
CTCCCCGTTTCTGTCGAGCGGTGGCGGCATAAGTGTAGGGGACACCTGGA
CCTCCGGGAAAAAGTTGATCGTGGTCGCGCCAGGGATTGCGGGGGTGTTA
ACAGAGTTCATCGAGCGCGCCTTGTAGCTTTGTACTGTTAATAGTACCTT
GTATGTATCTTGGCTCGGAGGTATTAATAGCAAGTGAAAGTGATTTTTTA
GGTTGTTACAGGGCCTTGCATGGTGTCTTGGTTTTGCCGTTTTGAGTGTT
GCGAAAGGGGGTCATGGAATTAATGGTAGGAAATGTGAGAGGGGTTTTGT
AGAGAAGATTGTCGCCGGACTGCAGCAAAAGGTACCCCACCTTTCTTATC
GTATCCCCCCTCCACCCCTACCTAGGAGACAGAGACAAACGCATGAGGAA
TATATCCATTATGGCTGGACGTTTTGTTGTAGCCCCGGCATGAGCATGGT
ACTGTAGCCTGGAGCAATGTTGTGCCGTTATCGCCAGCCGTGCGCCAAGC
CTTACGCAAATGATCACGCGACACTGCGGCCGTTACATTGAATAGTGACT
TTAGTTGTTATAGTGAGTTTTCGTTGCTGCCTGAATGCGACTGCGCAAGC
GCCCGGAAACAAAGTAAATAAATCGATCGCGTTGCAACTACTGTGTAACC
GCTGTCGTCTCATCTACTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig902:58344..66712-

>mRNA_F-serratus_M_contig902.20428.1 ID=mRNA_F-serratus_M_contig902.20428.1|Name=mRNA_F-serratus_M_contig902.20428.1|organism=Fucus serratus male|type=CDS|length=3012bp|location=Sequence derived from alignment at F-serratus_M_contig902:58344..66712- (Fucus serratus male)
ATGAACAGCAACGTCTTCGACTATCTGGAGAGGCTGCCTCCAGATGCTCT
TGATACTCTGTACGGGAAAGACGCCGGCTCGAGCAGCCACGGCCAATGGA
CTTGCAGGGCAATGCTGCAGTCGCTGCCGCAGCTGGCAAAGCAGCACGTC
ATGCGCTTAATTTTTGTGGAGGCCTTCGTGGATAAAAGTTTGCTCAAGTC
TTGGGTGAAGAAGGATTACCAGCGGGTGCACGCCGCTTCAATCCGCAAGA
TGAACAGCAACGTCTTCGACTATCTGGAGAGGCTGCCTCCAGATGCTCTT
GATACTCTGTACGGGAAAGACGCCGGCTCGAGCAGCCACGGCCAATGGAC
TTGCAGGGCAATGCTGCAGTCGCTGCCGCAGCTGGCAAAGCAGCACGTCA
TGCGCTTAATTTTTGTGGAGGCCTTCGTGGATAAAAGTTTGCTCAAGTCT
TGGGTGAAGAAGGATTACCAGCGGGTGCACGCCGCTTCAATCCGCAAGCT
GATCAGCCTGCGAATTCTTTTGCAGAGCGCGGACGGGCAGGAATACCAGC
TGAACCCCCCCTTTCGAGAAAACCTCCGGCGGGCGCTCTGCACGGCGAAC
AAAGCTCCCTGGCAGCTGATCAGCCTGCGAATTCTTTTGCAGAGCGCGGA
CGGGCAGGAATACCAGCTGAACCCCCCCTTTCGAGAAAACCTCCGGCGGG
CGCTCTGCACGGCGAACAAAGCTCCCTGGCAGGGGGATGTTCCGTTAACG
GCAGACAGGAGCCCCCCGACCGTGTCAAAGATCGAGCGTCAGATGCACTC
GCAGTGGCAAGGGGGATGTTCCGTTAACGGCAGACAGGAGCCCCCCGACC
GTGTCAAAGATCGAGCGTCAGATGCACTCGCAGTGGCAAGACGTATTGTA
CTTCCTGGTGGGGTCAGACGAAGAGGGGCGAAGCGCACCGCCTGCCCGGG
TGGTGAAGTTCATGGAGGAGAGCGGCCTGATGAAGACCACCAGGGGCGGG
GGTGCTTTGCGCATCACCGACAAAGGACGTATTGTACTTCCTGGTGGGGT
CAGACGAAGAGGGGCGAAGCGCACCGCCTGCCCGGGTGGTGAAGTTCATG
GAGGAGAGCGGCCTGATGAAGACCACCAGGGGCGGGGGTGCTTTGCGCAT
CACCGACAAAGGATACGAGTTTATGCTGAAGGAGACCCACGTCCAGGCGT
GGATAGTGGTCCACGCGCTCATCAATGGGTACGGCAGGACGCAGCCTGGT
TGCCGGGACGAGCTGCTCGCGTTTCTGTTCCAGCTGAGCTACTGTAAGAT
ACGAGTTTATGCTGAAGGAGACCCACGTCCAGGCGTGGATAGTGGTCCAC
GCGCTCATCAATGGGTACGGCAGGACGCAGCCTGGTTGCCGGGACGAGCT
GCTCGCGTTTCTGTTCCAGCTGAGCTACTGTAAGCTGGGAGACGCCTACC
CTTTGGGAGCCCTGACATTGACCCAGCGCGACCTCGCCCAGGACTTCGTA
GACCTCGGCCTTCTATTCAAGAGGAAGGCGAAGTCGACGCGATTCTACCC
GACGTCCATCGCGATCAACCTCATCTTCGGTTCGTCCGTGTCCAGCGGAG
ATAGCCGGCCTCAGCAACAGCCGCAGCAGCCTGGGGGCGTAGCTGCGGTA
AGGAAGGGTACACTGGGAGACGCCTACCCTTTGGGAGCCCTGACATTGAC
CCAGCGCGACCTCGCCCAGGACTTCGTAGACCTCGGCCTTCTATTCAAGA
GGAAGGCGAAGTCGACGCGATTCTACCCGACGTCCATCGCGATCAACCTC
ATCTTCGGTTCGTCCGTGTCCAGCGGAGATAGCCGGCCTCAGCAACAGCC
GCAGCAGCCTGGGGGCGTAGCTGCGGTAAGGAAGGGTACACGGGAGGATG
ACGCCACGGTTCAGATCATCGTCGAGACCAACTTTCAGCGGGAGGATGAC
GCCACGGTTCAGATCATCGTCGAGACCAACTTTCAGGTGGTGGCGTACAC
GCGATCAAAGCTGCACTTCGCGATGCTCAGCCTGTTCCTCGACTTGCGCA
CGCGGCTCCCGAACGTGATCATCGGGGCGATCACGAGGGAGAGCATGCGG
AGGGCCTTGGCCACGGGGATCAAGGGGCGACAGGTCCTGGACTTCTTGAA
ATGCCACGCACATCCCGTTGTAAGAAGGCGTTCTCCGGTGGTACCCGAGA
ACATCGCCGACCAGGCAAGCGATTTCTCCTGCGGCTCGGTGGTGGCGTAC
ACGCGATCAAAGCTGCACTTCGCGATGCTCAGCCTGTTCCTCGACTTGCG
CACGCGGCTCCCGAACGTGATCATCGGGGCGATCACGAGGGAGAGCATGC
GGAGGGCCTTGGCCACGGGGATCAAGGGGCGACAGGTCCTGGACTTCTTG
AAATGCCACGCACATCCCGTTGTAAGAAGGCGTTCTCCGGTGGTACCCGA
GAACATCGCCGACCAGGCAAGCGATTTCTCCTGCGGCTCGGTTTTGCTGT
GGGAACGGGAACGAGATCGCATGATTAAGGAAGATGGGGTGCTTCTGGAT
GTGTCACATGCGAGCGAAGATACTTTCCGGCAAGTCGTTGAGTTCGCCAA
CAACGCGCGGGGGTTGTTGTGGAACTCCCCGTTTCTGTCGAGCGGTGGCG
GCATAAGTGTAGGGGACACCTGGACCTCCGGGAAAAAGTTGATCGTGGTC
GCGCCAGGGATTGCGGGGGTGTTAACAGAGTTCATCGAGCGCGCCTTGTA
GGTTTTGCTGTGGGAACGGGAACGAGATCGCATGATTAAGGAAGATGGGG
TGCTTCTGGATGTGTCACATGCGAGCGAAGATACTTTCCGGCAAGTCGTT
GAGTTCGCCAACAACGCGCGGGGGTTGTTGTGGAACTCCCCGTTTCTGTC
GAGCGGTGGCGGCATAAGTGTAGGGGACACCTGGACCTCCGGGAAAAAGT
TGATCGTGGTCGCGCCAGGGATTGCGGGGGTGTTAACAGAGTTCATCGAG
CGCGCCTTGTAG
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