prot_F-serratus_M_contig902.20428.1 (polypeptide) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: D7FHY7_ECTSI (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY7_ECTSI) HSP 1 Score: 724 bits (1868), Expect = 1.590e-258 Identity = 375/515 (72.82%), Postives = 412/515 (80.00%), Query Frame = 0
Query: 1 MNSNVFDYLERLPPDALDTLYGK------DAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVS--SGDSRPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSPFLSSGGGISVGDTW----------TSGKKLIVVAPGIAGVLTEFI 497
M+ NVFDYLERLPPDALD LYG G SHGQWTCRA+LQSLPQLAKQHVMRL+FVE V K +LKSWVKK+YQRVHAAS+RKL+SLR+LL SA GQEYQLNPPFRENL+RALC ++K PWQGDVPL+ADRSPPTV+KIERQMHSQWQDVLYFLVGSDEEGRS PPARVVKFMEESGLM+ RG GALRITDKGYEFMLKE HVQAW+VVHALINGYGRTQPGCRDELLAFLFQLSYCK+GDAYPLGALT TQRDLAQDFV+LGLLFKRKAKSTRFYPTSIA+NLIFGSS S +G + ++P REDD ++ IIVETNFQV+AYTRSKLHFAMLSLFL+LR LPN I+GAITRESMR+AL+TGIKGRQVLDFLK HAHPVVRRR+PVVPENIADQ VLLWERERDRM DGVL+DVS+AS D FR + EFAN +GLLW+SP KKL+VV+PGI L I
Sbjct: 19 MSLNVFDYLERLPPDALDKLYGAAPPAADGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSAGGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGRGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAXXXXTQRKPQPAXXXXXXKREDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALSTGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQ--------VLLWERERDRMEHRDGVLVDVSYASRDAFRGMTEFANAKQGLLWSSPLGGEDXXXXXXXXXXXXXXXXXXLAGRKKLMVVSPGIVESLNAAI 525
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A6H5KJZ4_9PHAE (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJZ4_9PHAE) HSP 1 Score: 506 bits (1303), Expect = 1.150e-174 Identity = 260/367 (70.84%), Postives = 283/367 (77.11%), Query Frame = 0
Query: 1 MNSNVFDYLERLPPDALDTLYG------KDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKG------------------------------------------------YEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVS-----SGDSRPQQQPQQPGGV 308
M+ NVFDYLERLPPDALD LYG + G SHGQWTCRA+LQSLPQLAKQHVMRL+FVE V K +LKSWVKK+YQRVHAAS+RKL+SLR+LL SADGQEYQLNPPFRENL+RALC ++K PWQGDVPL+ADRSPPTV+KIERQMHSQWQDVLYFLVGSDEEGRS PPARVVKFMEESGLM+ RGGGALRITDKG YEFMLKE HVQAW+VVHALINGYGRTQPGCRDELLAFLFQLSYCK+GDAYPLGALT TQRDLAQDFV+LGLLFKRKAKSTRFYPTSIA+NLIFGSS S +G Q++PQ GG+
Sbjct: 19 MSLNVFDYLERLPPDALDKLYGAAPPAAQGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSADGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGGGALRITDKGQEEAWNCSRGARGGSFLCLRGGVGRGGARVLSTSSMLEGAVYPRRTGLYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAGGGGAQRKPQPAGGL 385
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: W4FDT1_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDT1_9STRA) HSP 1 Score: 323 bits (829), Expect = 3.210e-102 Identity = 192/470 (40.85%), Postives = 274/470 (58.30%), Query Frame = 0
Query: 4 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFV-EAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFG-------SSVSSGDS-----RPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLW 459
N F++L LP ++D LY +DA W C+A+ QS+ LA+Q VMRL+F + + WV+ Q A+I KL LR+L + EY LNP F++ L++AL + +PW+ P +++E+ +W VL+F+VGS +APP V+ +E +GLM+ ++ AL ITD GYEFMLK+ H Q WI V + R +E+L FLFQ+SYC++ + Y + LT Q+ L D V+LGLL++R AK+TRFY TS+A+NLIFG SS++ RP + P P AA DA + I+VETNF+V AYT+S LH AMLS+F+D+ RLPN+ +G +TRES+R AL+ GI Q+ DFL HAHP + SPV+PENIADQ + LW+RER+R+ + G L+D +ED F V++FA + +LW
Sbjct: 2 NAFEFLGSLPGGSVDRLY-QDA-------WACQAVFQSMSPLAQQIVMRLLFTNQGSYSHDAILQWVQDPAQVKMTAAIEKLRHLRVLRMAHGTAEYVLNPVFQDQLKKALSSLGGSPWEAGRHKLPSEKPIAAAELEQYARKRWDAVLHFMVGST--AVAAPPPTVIGILEHTGLMQPSKTDARALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILSAEEMLQFLFQMSYCRMNEYYAVADLTRHQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFGGMLGQTRSSITMSQGLDHLHRPSKSPHLPPPTAAAA------DAHLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQ--------LYLWQRERNRIKFDAGELVDGFVTTED-FDVVLKFAQDVGVMLW 446
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: F0W5B1_9STRA (General transcription factor IIH subunit 4 n=2 Tax=Albugo TaxID=65356 RepID=F0W5B1_9STRA) HSP 1 Score: 322 bits (825), Expect = 1.350e-101 Identity = 195/477 (40.88%), Postives = 272/477 (57.02%), Query Frame = 0
Query: 4 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWV----------------KKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQ-GDVPLTADRSPPTVS-KIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSP 462
+ F++LE LP L++LY W C+A+ QSLP LA+Q VMRL+ V + +L+ W+ K ++ SI+KL LR+ QS+ YQL+ F++ L+ ALC PW+ G L D S ++ER S W VL+++VGS PP VV + + LM+ + AL ITDKGYEFMLK+ H+Q WI + I RT ++++L FLFQ+SYC++ YP+ LT TQ+ L DF + GLL+++++ S RFY TS+AINLIFG + +S S Q VA R + D T IVETNF+V AYT S LH AMLS+F+D+ RLPN+ IG ITRES+R AL GI +Q+ DFL HAHP +++ +P+VPENIADQ + LWE+ER+R+ +G+L D ++ E+ F QV E+A R L W P
Sbjct: 2 DAFEFLETLPNATLESLYADP--------WVCQAVFQSLPSLAQQFVMRLLSCNTVVQEQVLREWLVTQVQSDPGTSVGKEKAKSIDEIYQHSIQKLRKLRVFTQSSTDS-YQLHAGFQKQLKYALCHLGGCPWEVGRRKLGKDIEVSFASTELERYARSHWDAVLHYMVGSTSV--PDPPQAVVDILLRTNLMQASVDQRALHITDKGYEFMLKDIHIQMWIFILEYIKTLDRTGALKQEDILRFLFQISYCQVNAYYPVQDLTKTQQLLLTDFNNFGLLYRKRSNSDRFYTTSLAINLIFGGTTTSNYSETQ--------VARPRMSSMSDLLT---IVETNFKVYAYTTSTLHIAMLSVFVDIVARLPNLAIGFITRESLRSALVHGISAQQIYDFLLKHAHPRMKKNNPIVPENIADQ--------IYLWEKERNRIKFLEGILFDGFNSKEE-FEQVREYAQKQRFLTWTDP 447
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A836C856_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C856_9STRA) HSP 1 Score: 321 bits (823), Expect = 4.600e-101 Identity = 196/456 (42.98%), Postives = 262/456 (57.46%), Query Frame = 0
Query: 60 VDKSLLKSWVKKDYQRVHAASIRKLISLRILLQS-------ADGQEYQ-----LNPPFRENLRRALCTANKAPWQGD--VPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGGALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYC------------------------------------------KLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLW 459
+ K LLK WV+ Y VH A++R+L +LR+L+++ A Q+ + LNPPFR+NL +AL T + APW+ D L D+ P+ +KIE +M +W+ VL+FLV SD G P+ V FM+++GLM L IT++GYEFML++ HVQAW+ V +LI + RD+LL+FLF LSYC K+ + YPL ALT Q LA+DF+DLGLL++RK S RFY T IA+NL+FG++ + SR Q AA + + IIVETNFQVVAYT S LH AML+LFL+LR RLPN++IG ITRES+R+AL TGIK Q+L+FLK HAHP V R P++PENIADQ ++LWERER R+ + G LLD+ F +V E+A LW
Sbjct: 25 ISKDLLKGWVRDAYTGVHRAAVRQLSALRVLVRAQELSGAAAAAQQQRRGMIALNPPFRKNLLQALLTPDVAPWKDDPRFALRPDKLTPSRAKIEGEMRRKWEAVLHFLVASDGAGAGPTPS-VRAFMQQAGLMARRGRSEQLVITNRGYEFMLRDIHVQAWMFVLSLIRSKS-SDAQARDDLLSFLFMLSYCTVSAALQPLEGHHNAQSVCAAPSLSCKPLPAAPSASVNRCSEKVCEDYPLLALTPAQAQLARDFIDLGLLYQRKPSSQRFYTTEIAVNLVFGAAAAEHPSRAVIQ-------AADASAQLDLAPRMTIIVETNFQVVAYTTSDLHVAMLTLFLELRARLPNMVIGVITRESVRQALVTGIKASQILNFLKWHAHPNVINRRPMIPENIADQ--------IILWERERTRVKYDAGTLLDLPFEGVHDFDKVAEYAEELGACLW 463
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A024TBA0_9STRA (General transcription factor IIH subunit 4 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBA0_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.040e-100 Identity = 197/469 (42.00%), Postives = 274/469 (58.42%), Query Frame = 0
Query: 4 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVE-AFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQ-GDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGS---------SVSSGDSRPQQQPQQPGGVAAVRKGTREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWN 460
N F++L LP ++D LY +DA W C+A+ QSL LA+Q VMRL+F A + WV+ Q A+I KL LR+L +Y LNP F+E L++AL + +PW+ G L A++ P V ++E +W VL+F+VGS +APPA V+ +E + LM+ ++ AL ITD GYEFMLK+ H Q WI V + R DE+L FLFQ+SYC++ + Y + LT Q+ L D V+LGLL++R AK+TRFY TS+A+NLIFG ++S G P D+++ I+VETNF+V AYT+S LH AMLS+F+D+ RLPN+ +G +TRES+R AL+ GI Q+ DFL HAHP + SPV+PENIADQ + LW+RER+R+ E G L+DV A+ED F VV+ A + LLW+
Sbjct: 2 NAFEFLGSLPGGSVDRLY-QDA-------WACQAVFQSLSPLAQQIVMRLLFSNHATYAHDAILHWVQDAAQDKMTAAIEKLRHLRVLRVVQGSLDYVLNPVFQEQLKKALSSLGGSPWEAGRSKLPAEKPIPAV-ELELYARKRWDSVLHFMVGST--AVAAPPATVIGILEHTKLMQPSKSDSRALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILPADEMLQFLFQMSYCRMNEYYAVADLTRNQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFGGMLGQTRANMTMSQGLDHITNYAADPSKSRLPSASPARADSSLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQ--------LYLWQRERNRIKFEPGELVDV--ANED-FDAVVKHAEDMGVLLWH 448
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A6G0WGX7_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGX7_9STRA) HSP 1 Score: 317 bits (813), Expect = 7.960e-100 Identity = 188/467 (40.26%), Postives = 259/467 (55.46%), Query Frame = 0
Query: 4 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRP--------QQQPQQPGGVAAVRKGTREDDAT-VQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWN 460
N F+YL LP +LD LY W C+A+ QS+ L++Q VMRL+F V K L W++ Q A+I KL LR+L ++ LNP F+E L+ AL + +PW+ P + +E+ +W VL+F+VGS APP V+ +E + LMK + AL ITD GYEFMLK+ H Q WI V I R DE+L F FQ+SYC++ + Y + LT Q+ L D V LGLL+++ +K+TRFY TS+A+NLIFG G +R + QQ R A+ + I+VETNF+V AYT S LH AMLS+F+D+ RLPN+ +G +TRES+R AL GI Q+ DFL HAHP + SPV+PENIADQ + LW+RER+R+ + G LLD +ED F VV++A + L+W+
Sbjct: 2 NAFEYLGALPGTSLDRLY--------QDPWACQAVFQSMNPLSQQIVMRLLFTTTHVSKDALMHWIQDSAQSKMTAAIEKLCHLRVLRPVQGTNKFGLNPAFQEKLKTALSSLGGSPWEAGRKNLPPEKPIAAADLEQYARKRWDAVLHFMVGST--AVPAPPKEVIGILEHTRLMKPSETDARALHITDTGYEFMLKDIHAQTWIFVLNYIKDIDRKGILSADEMLQFFFQMSYCRMNEYYAVADLTRHQQQLLGDLVQLGLLYRKDSKATRFYTTSLAVNLIFGGMA--GQTRTNITMVQSLEAVHQQASSQVVPRPFASTSSASHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQ--------LYLWQRERNRIKFDAGELLDGFVTTED-FDSVVKYAQDLHVLMWH 447
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: A0A485KU14_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU14_9STRA) HSP 1 Score: 313 bits (802), Expect = 3.730e-98 Identity = 195/487 (40.04%), Postives = 275/487 (56.47%), Query Frame = 0
Query: 4 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVE--AFVDKSLLKSWVKKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQGDVPLTADRSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQ-------QQPQQPGGVAAVRKGTREDDATVQ---IIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSPF-----LSSGGGISV 472
N F++L LP ++D LY +DA W C+A+ QS+ L +Q VMRL+F ++ +SLL+ WV++ Q+ +I KL LR+L +E+ LNP F+E L++AL + +PW+ A P + +E+ +W VL+F+VGS APP V+ +E + LM+ + AL ITD GYEFMLK+ H Q WI V I R +E+L FLFQ+SYC++ + Y +G LT Q+ L D V+LGLLF++ K+TRFY TS+A+NLIFG + G +R +Q G + A I+VETNF+V AYT S LH AMLS+F+D+ RLPN+ +G +TRES+R AL GI Q+ DFL HAHP + SPV+PENIADQ + LW+RER+R+ + G LLD +ED F VV +A + LLW+ +S GG +V
Sbjct: 2 NAFEFLATLPAASVDRLY-QDA-------WACQAVFQSMEPLGQQIVMRLLFTSQVSYSQESLLE-WVQEPAQQKMIHAIEKLSHLRVLRVVKGQREFVLNPVFQEQLKKALSSLGGSPWEAGRQKLAAEPPISALDLEQYARKRWDAVLHFMVGST--AVPAPPPTVIGILEHTRLMQPSSSDARALHITDTGYEFMLKDVHAQTWIFVLEYIKDIDRRGILSAEEMLQFLFQMSYCRMNEYYAIGDLTRNQQQLLGDLVELGLLFRKGTKATRFYTTSLAVNLIFGGVL--GQTRTSISMVQSLEQVHSASGQQLTKGAVPRPVAVAAHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQ--------LYLWQRERNRIKFDAGELLDGFVTTED-FDTVVNYAQDLDVLLWHDAIHLRLVVSKAGGAAV 466
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: D0NRC9_PHYIT (General transcription factor IIH subunit 4 n=21 Tax=Phytophthora TaxID=4783 RepID=D0NRC9_PHYIT) HSP 1 Score: 311 bits (798), Expect = 1.980e-97 Identity = 191/480 (39.79%), Postives = 268/480 (55.83%), Query Frame = 0
Query: 4 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWV------KKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENLRRALCTANKAPWQ-GDVPLTADRSPPTVS-KIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQQPQQPGGVAAVRKG------------TREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSP 462
+ FD+LE LPP L+ LY W C+A+ Q+LP LA+Q VMRL+ + V + LL+ WV K A+++KL LR+ +Q G Y+ +P F++ L AL +PW+ G + L D + +ER ++W VL+++VGS PP VV + + L++ + AL ITD GYEFMLK+ HVQ WI + I T ++++L FLFQ+SYC+ G Y + LT TQR L DF+D GLLF+++ S RFY TS+A+NLIFG S + + A VR G T + A + ++VETNF++ AYT S LH AMLS+F+D+ RLPN+ IG ITRES+R AL GI +Q+ DFL HAHP +RR SPV+PENIADQ + LWERER+R+ +G+L D + ED + V ++A L W+ P
Sbjct: 2 DAFDFLETLPPATLERLY--------QDPWACQAIFQALPSLAQQFVMRLLPTNSAVPRDLLEQWVVPIPGETKRMPPQFNAALQKLEGLRVFVQQDGG--YKPHPTFQKQLMYALSNLGGSPWERGRLHLPRDPENTFAAVDLERYARARWDLVLHYMVGST--AVQEPPQSVVDILLRTKLLQASGADSRALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGGYYAVADLTETQRLLLGDFIDFGLLFRKRQNSDRFYTTSLAVNLIFGGST----GQKRSHVSLTSSFAGVRAGMKSQVADPRQAPTVDHGARLLVVVETNFKIYAYTSSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNSPVIPENIADQ--------IYLWERERNRVQFLEGILFDGFNTKED-YESVRDYAKGLMVLTWSDP 456
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Match: H3GUR6_PHYRM (General transcription factor IIH subunit 4 n=3 Tax=Phytophthora TaxID=4783 RepID=H3GUR6_PHYRM) HSP 1 Score: 309 bits (792), Expect = 2.030e-96 Identity = 194/490 (39.59%), Postives = 277/490 (56.53%), Query Frame = 0
Query: 4 NVFDYLERLPPDALDTLYGKDAGSSSHGQWTCRAMLQSLPQLAKQHVMRLIFVEAFVDKSLLKSWV-------KKDYQRVHAASIRKLISLRILLQSADGQEYQLNPPFRENL---------RRALCTANKAPWQ-GDVPLTAD-RSPPTVSKIERQMHSQWQDVLYFLVGSDEEGRSAPPARVVKFMEESGLMKTTRGGG-ALRITDKGYEFMLKETHVQAWIVVHALINGYGRTQPGCRDELLAFLFQLSYCKLGDAYPLGALTLTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAINLIFGSSVSSGDSRPQQQPQQPGGVAAVRKG------------TREDDATVQIIVETNFQVVAYTRSKLHFAMLSLFLDLRTRLPNVIIGAITRESMRRALATGIKGRQVLDFLKCHAHPVVRRRSPVVPENIADQASDFSCGSVLLWERERDRMIKEDGVLLDVSHASEDTFRQVVEFANNARGLLWNSP 462
+ FD+LE LP L+ LY W C+A+ Q+LP LA+Q VMRL+ A V ++LL+ WV K+ + HAA + KL LR+ +Q DG Y+ +P F++ L AL +PW+ G + L D + + +ER ++W VL+++VGS PP VV + + L++++ AL ITD GYEFMLK+ HVQ WI + I T ++++L FLFQ+SYC+ G+ Y + LT TQR L DF+D GLLF+++ S RFY TS+A+NLIFG S + + Q A VR G T + A + ++VETNF++ AYT S LH AMLS+F+D+ RLPN+ IG ITRES+R AL GI +Q+ DFL HAHP +RR +PV+PENIADQ + LWERER+R+ +G+L D ++ ED + V ++A + + L W P
Sbjct: 2 DAFDFLETLPTATLERLY--------QDPWACQALFQALPPLAQQFVMRLLPSNAAVPRALLEQWVVPEPGDAKRMPPQFHAA-LHKLEGLRVFVQQ-DGA-YRPHPTFQKQLMVKKYEQCYHYALSNLGGSPWERGRLQLPKDPENTYAAADLERYARARWDSVLHYMVGST--AVQEPPQSVVDILLRTKLLQSSGADSRALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGEYYAVADLTETQRLLLGDFIDFGLLFRKRPTSDRFYTTSLAVNLIFGGST----GQKRSQVSLTSSFAGVRAGVKSQVADPRHAPTADHGAQLLVVVETNFKIYAYTTSTLHVAMLSVFVDIVARLPNMAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNTPVIPENIADQ--------IYLWERERNRVQFLEGILFDGFNSKED-YESVRDYAEDLKVLTWMDP 465 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig902.20428.1 ID=prot_F-serratus_M_contig902.20428.1|Name=mRNA_F-serratus_M_contig902.20428.1|organism=Fucus serratus male|type=polypeptide|length=502bpback to top |