mRNA_F-serratus_M_contig9.20380.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 4.230e-18 Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 2
Query: 2 VKAEWTEYIAMKNKLDEIPFDEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAVYVEIVMYLNLNLDLVP--NHVPKIPMKDAFKHLPAR 331
V E Y ++ K DE+ EVL WW TG F L+ VA+ ++G+ A V+ +ERDFS VG +L+P RSR+D +VEIVM+LN N +P +P + K+ LPAR
Sbjct: 170 VAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPAR 281
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A2V3IDA5_9FLOR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDA5_9FLOR) HSP 1 Score: 84.0 bits (206), Expect = 6.570e-16 Identity = 44/112 (39.29%), Postives = 70/112 (62.50%), Query Frame = 2
Query: 2 VKAEWTEYIAMKNKLD-EIPFDEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAVYVEIVMYLNLNLDLVPNHVPKIPMKDAFKHLPARL 334
V+AE Y+ + L ++ +L WW GSK + LS VAR++ GHP + A I+RDF G LS RR+R D+ +V+++++L+ NLDL+P+ VP++ + +PARL
Sbjct: 221 VRAEINSYLDHERALPGDVTSRNLLNWWRTKGSK-YPSLSVVARAVLGHPVSSARIDRDFGTAGSFLSSRRTRHDSAFVDMLLFLHCNLDLIPSDVPEMSNPEWKSQIPARL 331
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 4.620e-14 Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 2
Query: 14 WTE--YIAMKNKLDEIPFDEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAVYVEIVMYLNLNLDLVPNHVP 289
W+E Y K +DE+ D VL WW S + L+ AR ++G PA+ A +E DF G++++ RS DA YVE++++L+ NLDL+P +P
Sbjct: 17 WSEQSYALQKRTIDELSCDSVLKWWKRWMSS-YPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIP 109
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 4.490e-13 Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 2
Query: 62 DEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAVYVEIVMYLNLNLDLVPNHVPKIPMKDAFKHLPARL 334
++VL WW + + L+ VAR ++G PA+ A +ERDFS G+M++ RS +D+ YVE++M+L+ NLDL+P + K+ A +P RL
Sbjct: 605 EDVLKWW-KMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRL 694
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 2.790e-12 Identity = 37/97 (38.14%), Postives = 61/97 (62.89%), Query Frame = 2
Query: 47 DEIPFDEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAVYVEIVMYLNLNLDLVPNHVPKIPMKDAFKHLPARLT 337
D++ + VL WW G + + L+ AR ++G PA+ A +ERDF+ M++ RS DA YVE+V++L+ NLDL+P +P++ +D +P RL+
Sbjct: 540 DDLSCEGVLEWWKKWG-RLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLS 635
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 4.340e-11 Identity = 41/112 (36.61%), Postives = 62/112 (55.36%), Query Frame = 2
Query: 2 VKAEWTEYIAMKNKLDEIPFDEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAVYVEIVMYLNLNLDLVPNH--VPKIPMKDAFKHLPAR 331
V E Y + K ++P +VL +W G + F L +VA+ +G A+ A IERDFS G + RSR + ++E+VM L N +L+P++ +P I KD K LPA+
Sbjct: 470 VSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAK 581
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.050e-10 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 2
Query: 92 GSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDA-VYVEIVMYLNLNLDLVPNHVPKIPMKDAFKHLPARLTEIDDLDDSIVPSLTETGGQPDTVYLNGSEAEE 433
G+ + L+ VAR ++G PA+ AA+ERDFS G+M++ RS +D+ YVE++++L+ NLDL+P + + A P RL + V L + G V L EA +
Sbjct: 2 GTHAYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTLTEAVARTMFPGRLA-------NPVEGLKQLDGAFTPVDLTDEEASD 109
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.050e-10 Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 2
Query: 113 LSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAV-YVEIVMYLNLNLDLVPNHVPKIPMKDAFKHLPARLTE----IDDLDDSIVP 370
L+ VAR ++G PA+ A +ERDFS G+M++ R +D+ YVE++++L+ NLDL+P + K+ A +P RL ++ LD + P
Sbjct: 9 LARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRLANPVEGLEQLDGAFAP 99
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 2.580e-10 Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 2
Query: 62 DEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAVYVEIVMYLNLNLDLVPNHVPKIPMKDAFKHLPARLTE----IDDLDDSIVP 370
++VL WW + + L+ VAR + G A+ A +E DFS G+M++ RS +D+ YVE++++L+ NLDL+P + K+ A +P RL ++ LD + P
Sbjct: 378 EDVLKWW-KMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAP 483
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 5.110e-10 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 2
Query: 62 DEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSLVGQMLSPRRSRLDAVYVEIVMYLNLNLDLVPNHVPKIPMKDAFKHLPARLTE----IDDLDDSIVP 370
++VL WW + + L+ VAR ++G PA+ A +E FS G+M + RS +D+ YVE++M+L+ NL+L+P + K+ A P RL ++ LD + P
Sbjct: 141 EDVLKWW-KMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEVVARTKFPGRLANPVDGLEPLDGAFAP 246 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig9.20380.1 >prot_F-serratus_M_contig9.20380.1 ID=prot_F-serratus_M_contig9.20380.1|Name=mRNA_F-serratus_M_contig9.20380.1|organism=Fucus serratus male|type=polypeptide|length=138bp MKNKLDEIPFDEVLLWWANTGSKKFRWLSHVARSIYGHPATVAAIERDFSback to top mRNA from alignment at F-serratus_M_contig9:1392547..1393305+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig9.20380.1 ID=mRNA_F-serratus_M_contig9.20380.1|Name=mRNA_F-serratus_M_contig9.20380.1|organism=Fucus serratus male|type=mRNA|length=759bp|location=Sequence derived from alignment at F-serratus_M_contig9:1392547..1393305+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig9:1392547..1393305+ >mRNA_F-serratus_M_contig9.20380.1 ID=mRNA_F-serratus_M_contig9.20380.1|Name=mRNA_F-serratus_M_contig9.20380.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig9:1392547..1393305+ (Fucus serratus male)back to top |