mRNA_F-serratus_M_contig895.20304.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: D8LDX4_ECTSI (Fumarate hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX4_ECTSI) HSP 1 Score: 255 bits (651), Expect = 1.210e-80 Identity = 133/156 (85.26%), Postives = 142/156 (91.03%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMV ANLLSSMRLLGD C+SFA+RCVSG ANR+RIQ+IMS+SLMLVTALNPKIGYDNASK VAKKAHK+GTTLK+AAL LELLTEEEFD+WVRPE+MIGPK
Sbjct: 335 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMV---------ANLLSSMRLLGDSCSSFAERCVSGTVANRDRIQEIMSTSLMLVTALNPKIGYDNASK-VAKKAHKEGTTLKEAALALELLTEEEFDEWVRPENMIGPK 480
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: A0A2H0QXN8_9PROT (Fumarate hydratase class II n=1 Tax=Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49 TaxID=1973900 RepID=A0A2H0QXN8_9PROT) HSP 1 Score: 228 bits (580), Expect = 3.830e-70 Identity = 113/157 (71.97%), Postives = 131/157 (83.44%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPKD 473
SSIMPGKVNPTQCEA+TM+C QVMGNH+A+T+ GSNGHFELNVFKPVM+ NLL S+RLL DGC SF D CV GI+ANR RI+ + SLMLVTALNP IGYDNA+K +AKKAHK+GTTLK+AA+ LELLTEE+F+QWVRPE+MIGPKD
Sbjct: 323 SSIMPGKVNPTQCEAMTMLCTQVMGNHMAITIAGSNGHFELNVFKPVMIH---------NLLQSIRLLADGCVSFTDNCVVGIKANRGRIESLRDESLMLVTALNPHIGYDNATK-IAKKAHKEGTTLKEAAIALELLTEEQFNQWVRPENMIGPKD 469
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: A0A2D4BP08_PYTIN (Fumarate hydratase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BP08_PYTIN) HSP 1 Score: 225 bits (573), Expect = 4.940e-69 Identity = 117/156 (75.00%), Postives = 131/156 (83.97%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGKVNPTQCEA+TMVCAQVMGNHVAV+VGGSNGHFELNVFKPVM+ +NLLSS+RLLGD +F D CV GIEANR+ I +M +SLMLVTALNP IGYDNA+K VAKKAHKDGTTL++A +EL LLT EEFD+ VRPEDMIGPK
Sbjct: 330 SSIMPGKVNPTQCEAITMVCAQVMGNHVAVSVGGSNGHFELNVFKPVMI---------SNLLSSIRLLGDSAVAFTDNCVVGIEANRDTIDKLMKNSLMLVTALNPHIGYDNAAK-VAKKAHKDGTTLREAVVELGLLTGEEFDRLVRPEDMIGPK 475
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: T0RV02_SAPDV (Fumarate hydratase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0RV02_SAPDV) HSP 1 Score: 225 bits (573), Expect = 6.150e-69 Identity = 116/156 (74.36%), Postives = 132/156 (84.62%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGKVNPTQCEA+TMVCAQV+GNHVAVTVGGSNGHFELNVFKPVM+ +NL+SS+RL+GD CA+F D CV GIEAN + I +M +SLMLVTALN IGYDNASK VAKKAHK+GTTLK+A +EL LLT EEFD++VRPEDMIGPK
Sbjct: 339 SSIMPGKVNPTQCEAITMVCAQVIGNHVAVTVGGSNGHFELNVFKPVMI---------SNLISSVRLIGDSCAAFTDNCVVGIEANLDTIDRLMKNSLMLVTALNSHIGYDNASK-VAKKAHKEGTTLKEAVVELGLLTAEEFDRYVRPEDMIGPK 484
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: A0A7S3XU16_HETAK (Fumarate hydratase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU16_HETAK) HSP 1 Score: 220 bits (561), Expect = 6.630e-69 Identity = 112/156 (71.79%), Postives = 130/156 (83.33%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGK+NPTQCEALTMV AQVMGNHVA+TVGGSNGHFELNVFKPVM+ ANLLSS++L+GD C SF+ CV GI+AN E+I ++MS+SLMLVTALNPKIGYDNA+K VAK AH++GTTLK+AA + LT EEFDQWV P DM+GPK
Sbjct: 171 SSIMPGKINPTQCEALTMVAAQVMGNHVAITVGGSNGHFELNVFKPVMI---------ANLLSSIQLIGDACRSFSRNCVVGIQANTEKINELMSNSLMLVTALNPKIGYDNAAK-VAKHAHQNGTTLKEAATSMGFLTPEEFDQWVVPADMVGPK 316
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: A0A482UH69_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UH69_9ARCH) HSP 1 Score: 215 bits (548), Expect = 1.990e-68 Identity = 110/156 (70.51%), Postives = 125/156 (80.13%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGKVNPTQCEALTMVCAQVMGNHVA+TVGGSNGHFELNVFKPVMV +N L S RL+GD C SF + CVSGIEAN +RI +++ SLMLVTALNP IGYD A+ AKKAHK+GTTLK+AA+ L LT +FD WV+PE+MIGPK
Sbjct: 64 SSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELNVFKPVMV---------SNFLQSARLIGDACVSFTEHCVSGIEANHKRINELLFDSLMLVTALNPYIGYDKAAA-TAKKAHKEGTTLKEAAIALGHLTSAQFDAWVKPENMIGPK 209
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: A0A6G0YCJ3_APHCR (Fumarate hydratase n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0YCJ3_APHCR) HSP 1 Score: 220 bits (560), Expect = 3.010e-68 Identity = 111/156 (71.15%), Postives = 129/156 (82.69%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGKVNPTQCEA+TMVCAQVMGNHVAVTVGGSNGHFELNVFKP++V +N+L S RLL D C SF D CV GIEAN+ERI ++ +SLMLVTALNP IGYD A+K +AK AHK+G+TL++ AL+L LTEEEFD+WVRPEDM+GPK
Sbjct: 227 SSIMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSNGHFELNVFKPMIV---------SNVLRSTRLLADSCMSFTDNCVVGIEANKERISHLLQNSLMLVTALNPHIGYDKAAK-IAKTAHKNGSTLRETALQLGYLTEEEFDKWVRPEDMLGPK 372
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: A0A8C4WXV6_EPTBU (Fumarate hydratase, mitochondrial n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WXV6_EPTBU) HSP 1 Score: 222 bits (565), Expect = 1.510e-67 Identity = 112/156 (71.79%), Postives = 130/156 (83.33%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGKVNPTQCEALTMV AQVMGN+VA T G S+GHFELNVFKP++VR N+L S+RLLGD C SFAD C+SG++AN ERI +MS+SLMLVTALNP IGYD A+K +AKKAHKDGTTLK+AALEL LT E+FDQWV+P+DM+GPK
Sbjct: 358 SSIMPGKVNPTQCEALTMVAAQVMGNNVATTFGASSGHFELNVFKPMIVR---------NVLQSVRLLGDSCCSFADHCISGMQANHERINQLMSNSLMLVTALNPHIGYDKAAK-IAKKAHKDGTTLKEAALELGFLTSEQFDQWVKPQDMLGPK 503
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: A0A024GCI2_9STRA (Fumarate hydratase n=2 Tax=Albugo TaxID=65356 RepID=A0A024GCI2_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.710e-67 Identity = 114/156 (73.08%), Postives = 131/156 (83.97%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGKVNPTQCEA+TMVCAQVMGNHVAVTVGGSNGHFELNVFKPVM+ +NLLSS+RL+GD +F D CV+GI AN++ I +M +SLMLVTALNP IGYDN+SK VAKKAH+DGTTLK+AA+EL LT EEFD+ VRP+DMIGPK
Sbjct: 320 SSIMPGKVNPTQCEAITMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMI---------SNLLSSIRLIGDSAIAFTDNCVTGIIANKDTIDRLMKNSLMLVTALNPHIGYDNSSK-VAKKAHQDGTTLKEAAIELGFLTGEEFDRLVRPQDMIGPK 465
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Match: A0A7K8EML2_LEURO (Fumarate hydratase, mitochondrial (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K8EML2_LEURO) HSP 1 Score: 214 bits (546), Expect = 1.810e-67 Identity = 107/156 (68.59%), Postives = 129/156 (82.69%), Query Frame = 3
Query: 3 SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHRSNTRANLLSSMRLLGDGCASFADRCVSGIEANRERIQDIMSSSLMLVTALNPKIGYDNASKKVAKKAHKDGTTLKQAALELELLTEEEFDQWVRPEDMIGPK 470
SSIMPGKVNPTQCEA+TMV AQVMGNHVAVTVGGSNGHFELNVFKP+M++ N+L+S RLLGD C SF D CV GI+AN +RI +M+ SLMLVTALNP IGYD A+K +AK AHK+GTTLK+AA++L LT ++FDQWV+P+DM+GP+
Sbjct: 122 SSIMPGKVNPTQCEAVTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIK---------NVLNSARLLGDVCVSFTDNCVVGIQANTDRINKLMNESLMLVTALNPHIGYDKAAK-IAKTAHKEGTTLKEAAIKLGFLTSDQFDQWVKPKDMLGPQ 267 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig895.20304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig895.20304.1 >prot_F-serratus_M_contig895.20304.1 ID=prot_F-serratus_M_contig895.20304.1|Name=mRNA_F-serratus_M_contig895.20304.1|organism=Fucus serratus male|type=polypeptide|length=156bp MPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVRLYHback to top mRNA from alignment at F-serratus_M_contig895:10760..12993- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig895.20304.1 ID=mRNA_F-serratus_M_contig895.20304.1|Name=mRNA_F-serratus_M_contig895.20304.1|organism=Fucus serratus male|type=mRNA|length=2234bp|location=Sequence derived from alignment at F-serratus_M_contig895:10760..12993- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig895:10760..12993- >mRNA_F-serratus_M_contig895.20304.1 ID=mRNA_F-serratus_M_contig895.20304.1|Name=mRNA_F-serratus_M_contig895.20304.1|organism=Fucus serratus male|type=CDS|length=936bp|location=Sequence derived from alignment at F-serratus_M_contig895:10760..12993- (Fucus serratus male)back to top |