mRNA_F-serratus_M_contig893.20300.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A6H5L742_9PHAE (ENDO3c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L742_9PHAE) HSP 1 Score: 468 bits (1205), Expect = 5.390e-163 Identity = 230/313 (73.48%), Postives = 259/313 (82.75%), Query Frame = 1
Query: 1 ATSYGYYLVPPNHWEPSKDAND-RDGGTFSRPLRFGERLASTAKCSISQVAV------PEAGEGGEKTT-ALRVDV--AAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDATDFS 909
A SYGY++VPPN W+P + A RD GTFSRPLRFG+RL +TAKC+IS V P G GG++ ALRVDV A LT+ D EDI QV RMFQTTIDL PWFRL EA++RGYGRLFRSPT+FEDMVKSITGCNMKF GTIRMNKLLCE+FGR+GAFPTP DLE VQ EDLK+ AKVGYRA RILRLA+SFRDG+VDP WL A ERTR+EV KFVK LYGFGDYAAGNV MLLGFYEDIP+DSETVRHFKD+HGVTTKNVK+VAP+ +++Y YAPYQFLQYWYEMI WHEKKR EVHLW+A++FS
Sbjct: 96 ACSYGYFVVPPNLWQPCESAPGLRDSGTFSRPLRFGQRLVNTAKCTISLVPACGAASNPNQGSGGDQQAMALRVDVVSAEALTESDQEDIRVQVVRMFQTTIDLAPWFRLHPEAKKRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILRLAESFRDGSVDPTWLEAPERTREEVLKFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRDLEVHLWNASEFS 408
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A7S0DQ45_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQ45_9EUKA) HSP 1 Score: 247 bits (630), Expect = 2.040e-75 Identity = 126/302 (41.72%), Postives = 187/302 (61.92%), Query Frame = 1
Query: 7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLA--STAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFR--DGT--VDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTTK-NVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLW 891
SYGY+ + PN W P+ D D G SRP R+ +T + S S+ ++PE+ + + +L ++++++ V RM + + +K + + EA+ RG+GR FRSP ++EDMVK+IT CNMK+ GT+RMN LLC G+NGAFPTP ++ +A+ L++N K+GYRA+RI RLA +G +D +W A +R R+E F+ + LYGFG +AA NV LLG++E P DSETVRHFK+ H ++K D+ AR+ Y+ +APYQFL YW+E+ +EK+RG W
Sbjct: 138 SYGYFALAPNRWTPAPHGEDEDRGKLSRPFRYANEKVVWATIRQSGSRSSLPESPPN----LHITLHAPHELAIHEIQEVMDGVGRMLRVQMCVKGFHEVCPEAKDRGFGRTFRSPCLWEDMVKTITNCNMKWSGTVRMNHLLCTHVGKNGAFPTPKEVLKHKAQWLQENCKLGYRAERIRRLAACVEGIEGMEKLDLQWFEASDRKREEAFERIIKLYGFGKFAAHNVCQLLGYHESFPFDSETVRHFKEHHKASSKAKFTDIEKLARKHYSTFAPYQFLAYWFELWTAYEKRRGSTSTRW 435
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A0G4H2A2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2A2_VITBC) HSP 1 Score: 237 bits (604), Expect = 1.710e-72 Identity = 118/297 (39.73%), Postives = 180/297 (60.61%), Query Frame = 1
Query: 7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRN-GAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWD 894
SYG++++ PN W P + D G F RPLR+GE+ +++ G+ T + V + L D + +I +Q+ RM + + + W+ L +EA+ G+GRLFRSPT++EDMVK+IT CN+ ++ T MN+LLC+K + G+FP+P D+ E L+ +GYRA R+ +LA +F DGT+D W +RT+ EV+ +L GFG +A NV L+GF E P DSETVRHF++ H V ++ D+ KA+Q YA YAPYQF+ YW+E+ +++K G + W+
Sbjct: 54 SYGFFVLAPNKWCPPPPSLSTDHGVFKRPLRYGEKGQHVCDVTLTM---------GQGTIDVSVATSCPLDDGHLGEIKQQICRMCRVSFPIDSWWSLHSEAKSLGFGRLFRSPTLWEDMVKTITVCNVHWKRTCIMNRLLCDKVSSHMGSFPSPSDVLKFSPEWLQRECNLGYRATRLYKLASAFTDGTIDVAWWEHSDRTQQEVWDACLSLNGFGPFATNNVLQLMGFLETFPYDSETVRHFRECHKVIG-SLADITKKAKQHYAKYAPYQFVAYWFELWKGYQQKDGVDADRWE 340
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A5C5V0E5_9BACT (ENDO3c domain-containing protein n=1 Tax=Posidoniimonas corsicana TaxID=1938618 RepID=A0A5C5V0E5_9BACT) HSP 1 Score: 215 bits (547), Expect = 9.640e-65 Identity = 123/299 (41.14%), Postives = 169/299 (56.52%), Query Frame = 1
Query: 7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTT-KNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDAT 900
SYGY+L+ PN W P D RPL G R+ V V + G G LRV +L D + + RM + DL W RL+ A +RG+GR+FRSPT+FED+VK+ITGCN+ ++ T+ MN+ L K GR GAFPTP L + LK + +VGYRA RI+ LA++F G VDP+W + R E+ + + L GFG YAA N+ LLG Y+ +P+D+ET RH+ GV KN K + P ++Y P APYQFL YW+E+ +E++ G + WD
Sbjct: 21 SYGYFLLAPNLWLP-------DQQKLLRPLTLGGRIVG--------VGVTQPGGRG---APLRVACDTKLPRADQAAVRAALVRMLRPDEDLAAWNRLNPAARRRGFGRMFRSPTLFEDLVKTITGCNVTWRNTMSMNRHLTAKVGR-GAFPTPAQLARLTPSRLKQSCRVGYRAARIINLARAFERGAVDPDWFESPARETAELREALLRLEGFGPYAAANMLQLLGHYDHLPIDTETYRHYCHVTGVERPKNDKLLDPLIHERYDPLAPYQFLAYWFEIWRDYERRYG-DAWTWDPA 299
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A5C5YQQ2_9BACT (HhH-GPD superfamily base excision DNA repair protein n=1 Tax=Posidoniimonas polymericola TaxID=2528002 RepID=A0A5C5YQQ2_9BACT) HSP 1 Score: 213 bits (541), Expect = 7.670e-64 Identity = 125/299 (41.81%), Postives = 169/299 (56.52%), Query Frame = 1
Query: 7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTT-KNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDAT 900
SYGY+L+ PN W P+ T RPL G A T +++Q P A LRV A L + + VTRM + DL W RL A +RG+GR+FRSPT+FED+VK+ITGCN+ ++ TI MN+ L EK G+ GAFPTP L + LK + +VGYRA RI+ LA++F G VDP+W ER E+ + + L G G YAA N+ LLG Y+ +P+D+ET RH+ G KN K + P +Y P APYQFL YW+E+ +E++ G + WD
Sbjct: 21 SYGYFLLAPNDWRPADQ-------TLYRPLTLG---AETVGVTLTQPGGPGA--------PLRVACDALLDRTAQQRVRAAVTRMLRIDEDLTDWRRLCPAARRRGFGRMFRSPTLFEDLVKTITGCNVTWRNTISMNRHLVEKVGQ-GAFPTPAQLARLTPSRLKASCRVGYRAGRIINLARAFERGDVDPDWFEHPERGTLELRERLLELKGIGPYAAANMLQLLGRYDHLPIDTETYRHYCHVTGAERPKNDKLLDPLIHARYDPLAPYQFLAYWFEIWRDYERRYG-DAWNWDPA 299
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A7S3YF63_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YF63_9EUKA) HSP 1 Score: 212 bits (540), Expect = 1.050e-63 Identity = 106/219 (48.40%), Postives = 143/219 (65.30%), Query Frame = 1
Query: 250 VTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFR--DGT--VDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTTK-NVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLW 891
V RM + ++DLK + + EA QRG+GR FRSP ++ED+VK+IT CNMK+ GT+ MN LC+K G+ G+FPTP ++ E LK+N +VGYRA+RI RLA + DGT +D EWL RT+ E F + +LYGFG +AA N LLG + P DSETVRHF++ HG T N + VA A + Y+ +APYQFL YW+E+ +E +RG W
Sbjct: 1 VARMLRVSLDLKEFHAMLPEARQRGFGRTFRSPCLWEDLVKTITNCNMKWSGTVTMNLRLCDKVGKEGSFPTPKEILAKSPEWLKENCRVGYRAERIHRLAAAVEGFDGTERLDLEWLEHPSRTQTEAFSKLLSLYGFGKFAAHNACQLLGHFNSFPFDSETVRHFREKHGANTSHNFQQVARMAEKHYSAFAPYQFLAYWFELWTGYEGRRGSTSTRW 219
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A517TMY9_9BACT (ENDO3c domain-containing protein n=1 Tax=Planctomycetes bacterium MalM25 TaxID=2527998 RepID=A0A517TMY9_9BACT) HSP 1 Score: 210 bits (535), Expect = 7.260e-63 Identity = 122/303 (40.26%), Postives = 172/303 (56.77%), Query Frame = 1
Query: 7 SYGYYLVPPNHWEPSKDANDR--DGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQ-VTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVR-HFKDFHGVTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDATD 903
SYGY+L+ PN W P + A R D F P + V E + G + T LRV L DP+V +R+ V R+ + +DL W RL A +RG+GRL+RSPT+FEDMVK+IT CN+ + T+RMN+LL E+ G GAFPTP L + L+ + KVGYRA RI+RLA+ F G +DP W + ER+ +EV++ + L GFG YAA NV LLG + +P+D+E R H K T ++ K + Y PY P++FL YWY++ +E +RG + W+ +
Sbjct: 23 SYGYFLLAPNRWRPERMALQRGFDAAEFGLP---------------AGVFATEIDQPGGRGTPLRVRCDRPL-DPEVRSALRRAVVRIGRPDLDLSRWRRLHPAARRRGFGRLYRSPTLFEDMVKTITNCNVGWPSTVRMNRLLVERVGE-GAFPTPARLARLAPSRLQRSCKVGYRAKRIVRLARGFESGAIDPSWFESTERSDEEVYEKLLTLEGFGPYAAANVMQLLGRDDVLPIDTEGYRLHEKRTGSRTPRDPKRLEAAITAHYEPYRPHRFLAYWYDLWRDYESQRG-DAWTWEPEE 307
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A7S2TEH0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TEH0_9EUKA) HSP 1 Score: 207 bits (528), Expect = 1.080e-61 Identity = 101/219 (46.12%), Postives = 146/219 (66.67%), Query Frame = 1
Query: 250 VTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFR--DGT--VDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVT-TKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLW 891
V RM + ++DL+ + + EA++RG+GR FRSP ++ED+VK+IT CNMK+ GT+ MN LC+K G+ G+FPTP ++ E LK+N +VGYRA+RI RLA++ DG +D EWL RT+ + F + +LYGFG++AA N LLG ++ P DSETVRHF++ HG + VA A + Y+ +APYQFL YW+E+ V +E++RG W
Sbjct: 5 VARMLRVSLDLQEFHAMVPEAKERGFGRTFRSPCLWEDLVKTITNCNMKWSGTVTMNLRLCDKVGKEGSFPTPKEILAKSPEWLKENCRVGYRAERIYRLAQAVEGMDGVERLDLEWLEHPSRTQADAFSKLLSLYGFGNFAAHNACQLLGHFDSFPFDSETVRHFREKHGANGSHKFPQVAKMAEKHYSAFAPYQFLAYWFELWVGYEERRGSTSTRW 223
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A061RIR0_9CHLO (Dna glycosylase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RIR0_9CHLO) HSP 1 Score: 208 bits (529), Expect = 7.400e-61 Identity = 122/324 (37.65%), Postives = 173/324 (53.40%), Query Frame = 1
Query: 7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPE---AGEGGEKTTALRVDV------------------AAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNG-AFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYE-DIPL-DSETVRHFKDFHGVTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDATDF 906
SYGY+ + PN W P+ D D G F RPL +K I+ + +G G++T +V A LT D+E + TR+ + DL+ WF A RG+GR FRSPT+FEDMVK++T CN+KF+ TI+MN+LLC+ FG+ G AFP P DL E LK A+VGYRA RI+ LAK+F ++ +W + EV K ++ L+GFG +A NV LLG Y+ DI D+ET R + GV + + + A ++Y +AP+QFL YW+E+ +E++ G E W F
Sbjct: 86 SYGYFGLAPNMWFPADPCRDEDEGVFLRPLTLEHFSVKRSKYFIASNLDSQGILSGPEGQRTRTQQVAYMMICQAKKQRALLLGLWSTAALTTADIEVAXKSATRILRLDQDLREWFTSHPVAAARGFGRTFRSPTLFEDMVKTVTNCNIKFKRTIQMNELLCKHFGKGGVAFPDPEDLCNQSEESLKSLARVGYRAKRIISLAKAFHARELEQDWFENSDTPTSEVVKRLRALHGFGPFATSNVLQLLGRYDGDIRAWDTETSRLMSEL-GVRPQGGESLHSAAERRYQRFAPFQFLAYWFELWTNYEERAGAEATRWSPELF 408
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A518C028_9BACT (Uncharacterized protein n=1 Tax=Mucisphaera calidilacus TaxID=2527982 RepID=A0A518C028_9BACT) HSP 1 Score: 205 bits (521), Expect = 8.860e-61 Identity = 109/290 (37.59%), Postives = 165/290 (56.90%), Query Frame = 1
Query: 7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTT-KNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRG 873
SYGY+L+ PNHW+ + + E +T S+ + V + +G A +L + + +++ R+ + D W+ + A A +RG+GRLFRSPT++ED+VK+ITGCN + TIRMN+LL E+ GR GAFP+P + A LK++ KVGYRA RI+ +A+ F DG++D W + ERT EV++ ++ L G G YAA N+ LLG Y+ + +DSET RH+ G+ N K++ P Y Y PY+FL YWY++ +E + G
Sbjct: 27 SYGYFLLSPNHWDAER--------------QVFETTLATEDSSLIAIRVSQGDQGDPLVVACH----RKLDRGEGVRVKQRLGRVLRVDEDFTGWYAMHAGARRRGFGRLFRSPTLWEDIVKTITGCNTTWTSTIRMNRLLVERVGR-GAFPSPGQVRRYGAARLKEHVKVGYRAQRIVDVARGFLDGSIDAGWYASPERTAGEVYEALRGLNGIGPYAAANICQLLGHYDFLAIDSETYRHYCAVKGIERPSNDKELDPLIEAHYEGYRPYRFLAYWYDLWTAYEARVG 297 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig893.20300.1 >prot_F-serratus_M_contig893.20300.1 ID=prot_F-serratus_M_contig893.20300.1|Name=mRNA_F-serratus_M_contig893.20300.1|organism=Fucus serratus male|type=polypeptide|length=305bp ATSYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAback to top mRNA from alignment at F-serratus_M_contig893:52806..57811- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig893.20300.1 ID=mRNA_F-serratus_M_contig893.20300.1|Name=mRNA_F-serratus_M_contig893.20300.1|organism=Fucus serratus male|type=mRNA|length=5006bp|location=Sequence derived from alignment at F-serratus_M_contig893:52806..57811- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig893:52806..57811- >mRNA_F-serratus_M_contig893.20300.1 ID=mRNA_F-serratus_M_contig893.20300.1|Name=mRNA_F-serratus_M_contig893.20300.1|organism=Fucus serratus male|type=CDS|length=1830bp|location=Sequence derived from alignment at F-serratus_M_contig893:52806..57811- (Fucus serratus male)back to top |