mRNA_F-serratus_M_contig893.20300.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig893.20300.1
Unique NamemRNA_F-serratus_M_contig893.20300.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A6H5L742_9PHAE (ENDO3c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L742_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 5.390e-163
Identity = 230/313 (73.48%), Postives = 259/313 (82.75%), Query Frame = 1
Query:    1 ATSYGYYLVPPNHWEPSKDAND-RDGGTFSRPLRFGERLASTAKCSISQVAV------PEAGEGGEKTT-ALRVDV--AAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDATDFS 909
            A SYGY++VPPN W+P + A   RD GTFSRPLRFG+RL +TAKC+IS V        P  G GG++   ALRVDV  A  LT+ D EDI  QV RMFQTTIDL PWFRL  EA++RGYGRLFRSPT+FEDMVKSITGCNMKF GTIRMNKLLCE+FGR+GAFPTP DLE VQ EDLK+ AKVGYRA RILRLA+SFRDG+VDP WL A ERTR+EV KFVK LYGFGDYAAGNV MLLGFYEDIP+DSETVRHFKD+HGVTTKNVK+VAP+ +++Y  YAPYQFLQYWYEMI WHEKKR  EVHLW+A++FS
Sbjct:   96 ACSYGYFVVPPNLWQPCESAPGLRDSGTFSRPLRFGQRLVNTAKCTISLVPACGAASNPNQGSGGDQQAMALRVDVVSAEALTESDQEDIRVQVVRMFQTTIDLAPWFRLHPEAKKRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILRLAESFRDGSVDPTWLEAPERTREEVLKFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRDLEVHLWNASEFS 408          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A7S0DQ45_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQ45_9EUKA)

HSP 1 Score: 247 bits (630), Expect = 2.040e-75
Identity = 126/302 (41.72%), Postives = 187/302 (61.92%), Query Frame = 1
Query:    7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLA--STAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFR--DGT--VDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTTK-NVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLW 891
            SYGY+ + PN W P+    D D G  SRP R+       +T + S S+ ++PE+         + +    +L   ++++++  V RM +  + +K +  +  EA+ RG+GR FRSP ++EDMVK+IT CNMK+ GT+RMN LLC   G+NGAFPTP ++   +A+ L++N K+GYRA+RI RLA      +G   +D +W  A +R R+E F+ +  LYGFG +AA NV  LLG++E  P DSETVRHFK+ H  ++K    D+   AR+ Y+ +APYQFL YW+E+   +EK+RG     W
Sbjct:  138 SYGYFALAPNRWTPAPHGEDEDRGKLSRPFRYANEKVVWATIRQSGSRSSLPESPPN----LHITLHAPHELAIHEIQEVMDGVGRMLRVQMCVKGFHEVCPEAKDRGFGRTFRSPCLWEDMVKTITNCNMKWSGTVRMNHLLCTHVGKNGAFPTPKEVLKHKAQWLQENCKLGYRAERIRRLAACVEGIEGMEKLDLQWFEASDRKREEAFERIIKLYGFGKFAAHNVCQLLGYHESFPFDSETVRHFKEHHKASSKAKFTDIEKLARKHYSTFAPYQFLAYWFELWTAYEKRRGSTSTRW 435          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A0G4H2A2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2A2_VITBC)

HSP 1 Score: 237 bits (604), Expect = 1.710e-72
Identity = 118/297 (39.73%), Postives = 180/297 (60.61%), Query Frame = 1
Query:    7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRN-GAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWD 894
            SYG++++ PN W P   +   D G F RPLR+GE+       +++          G+ T  + V  +  L D  + +I +Q+ RM + +  +  W+ L +EA+  G+GRLFRSPT++EDMVK+IT CN+ ++ T  MN+LLC+K   + G+FP+P D+     E L+    +GYRA R+ +LA +F DGT+D  W    +RT+ EV+    +L GFG +A  NV  L+GF E  P DSETVRHF++ H V   ++ D+  KA+Q YA YAPYQF+ YW+E+   +++K G +   W+
Sbjct:   54 SYGFFVLAPNKWCPPPPSLSTDHGVFKRPLRYGEKGQHVCDVTLTM---------GQGTIDVSVATSCPLDDGHLGEIKQQICRMCRVSFPIDSWWSLHSEAKSLGFGRLFRSPTLWEDMVKTITVCNVHWKRTCIMNRLLCDKVSSHMGSFPSPSDVLKFSPEWLQRECNLGYRATRLYKLASAFTDGTIDVAWWEHSDRTQQEVWDACLSLNGFGPFATNNVLQLMGFLETFPYDSETVRHFRECHKVIG-SLADITKKAKQHYAKYAPYQFVAYWFELWKGYQQKDGVDADRWE 340          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A5C5V0E5_9BACT (ENDO3c domain-containing protein n=1 Tax=Posidoniimonas corsicana TaxID=1938618 RepID=A0A5C5V0E5_9BACT)

HSP 1 Score: 215 bits (547), Expect = 9.640e-65
Identity = 123/299 (41.14%), Postives = 169/299 (56.52%), Query Frame = 1
Query:    7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTT-KNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDAT 900
            SYGY+L+ PN W P       D     RPL  G R+          V V + G  G     LRV    +L   D   +   + RM +   DL  W RL+  A +RG+GR+FRSPT+FED+VK+ITGCN+ ++ T+ MN+ L  K GR GAFPTP  L  +    LK + +VGYRA RI+ LA++F  G VDP+W  +  R   E+ + +  L GFG YAA N+  LLG Y+ +P+D+ET RH+    GV   KN K + P   ++Y P APYQFL YW+E+   +E++ G +   WD  
Sbjct:   21 SYGYFLLAPNLWLP-------DQQKLLRPLTLGGRIVG--------VGVTQPGGRG---APLRVACDTKLPRADQAAVRAALVRMLRPDEDLAAWNRLNPAARRRGFGRMFRSPTLFEDLVKTITGCNVTWRNTMSMNRHLTAKVGR-GAFPTPAQLARLTPSRLKQSCRVGYRAARIINLARAFERGAVDPDWFESPARETAELREALLRLEGFGPYAAANMLQLLGHYDHLPIDTETYRHYCHVTGVERPKNDKLLDPLIHERYDPLAPYQFLAYWFEIWRDYERRYG-DAWTWDPA 299          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A5C5YQQ2_9BACT (HhH-GPD superfamily base excision DNA repair protein n=1 Tax=Posidoniimonas polymericola TaxID=2528002 RepID=A0A5C5YQQ2_9BACT)

HSP 1 Score: 213 bits (541), Expect = 7.670e-64
Identity = 125/299 (41.81%), Postives = 169/299 (56.52%), Query Frame = 1
Query:    7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTT-KNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDAT 900
            SYGY+L+ PN W P+         T  RPL  G   A T   +++Q   P A         LRV   A L     + +   VTRM +   DL  W RL   A +RG+GR+FRSPT+FED+VK+ITGCN+ ++ TI MN+ L EK G+ GAFPTP  L  +    LK + +VGYRA RI+ LA++F  G VDP+W    ER   E+ + +  L G G YAA N+  LLG Y+ +P+D+ET RH+    G    KN K + P    +Y P APYQFL YW+E+   +E++ G +   WD  
Sbjct:   21 SYGYFLLAPNDWRPADQ-------TLYRPLTLG---AETVGVTLTQPGGPGA--------PLRVACDALLDRTAQQRVRAAVTRMLRIDEDLTDWRRLCPAARRRGFGRMFRSPTLFEDLVKTITGCNVTWRNTISMNRHLVEKVGQ-GAFPTPAQLARLTPSRLKASCRVGYRAGRIINLARAFERGDVDPDWFEHPERGTLELRERLLELKGIGPYAAANMLQLLGRYDHLPIDTETYRHYCHVTGAERPKNDKLLDPLIHARYDPLAPYQFLAYWFEIWRDYERRYG-DAWNWDPA 299          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A7S3YF63_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YF63_9EUKA)

HSP 1 Score: 212 bits (540), Expect = 1.050e-63
Identity = 106/219 (48.40%), Postives = 143/219 (65.30%), Query Frame = 1
Query:  250 VTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFR--DGT--VDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTTK-NVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLW 891
            V RM + ++DLK +  +  EA QRG+GR FRSP ++ED+VK+IT CNMK+ GT+ MN  LC+K G+ G+FPTP ++     E LK+N +VGYRA+RI RLA +    DGT  +D EWL    RT+ E F  + +LYGFG +AA N   LLG +   P DSETVRHF++ HG  T  N + VA  A + Y+ +APYQFL YW+E+   +E +RG     W
Sbjct:    1 VARMLRVSLDLKEFHAMLPEARQRGFGRTFRSPCLWEDLVKTITNCNMKWSGTVTMNLRLCDKVGKEGSFPTPKEILAKSPEWLKENCRVGYRAERIHRLAAAVEGFDGTERLDLEWLEHPSRTQTEAFSKLLSLYGFGKFAAHNACQLLGHFNSFPFDSETVRHFREKHGANTSHNFQQVARMAEKHYSAFAPYQFLAYWFELWTGYEGRRGSTSTRW 219          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A517TMY9_9BACT (ENDO3c domain-containing protein n=1 Tax=Planctomycetes bacterium MalM25 TaxID=2527998 RepID=A0A517TMY9_9BACT)

HSP 1 Score: 210 bits (535), Expect = 7.260e-63
Identity = 122/303 (40.26%), Postives = 172/303 (56.77%), Query Frame = 1
Query:    7 SYGYYLVPPNHWEPSKDANDR--DGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQ-VTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVR-HFKDFHGVTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDATD 903
            SYGY+L+ PN W P + A  R  D   F  P               + V   E  + G + T LRV     L DP+V   +R+ V R+ +  +DL  W RL   A +RG+GRL+RSPT+FEDMVK+IT CN+ +  T+RMN+LL E+ G  GAFPTP  L  +    L+ + KVGYRA RI+RLA+ F  G +DP W  + ER+ +EV++ +  L GFG YAA NV  LLG  + +P+D+E  R H K     T ++ K +       Y PY P++FL YWY++   +E +RG +   W+  +
Sbjct:   23 SYGYFLLAPNRWRPERMALQRGFDAAEFGLP---------------AGVFATEIDQPGGRGTPLRVRCDRPL-DPEVRSALRRAVVRIGRPDLDLSRWRRLHPAARRRGFGRLYRSPTLFEDMVKTITNCNVGWPSTVRMNRLLVERVGE-GAFPTPARLARLAPSRLQRSCKVGYRAKRIVRLARGFESGAIDPSWFESTERSDEEVYEKLLTLEGFGPYAAANVMQLLGRDDVLPIDTEGYRLHEKRTGSRTPRDPKRLEAAITAHYEPYRPHRFLAYWYDLWRDYESQRG-DAWTWEPEE 307          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A7S2TEH0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TEH0_9EUKA)

HSP 1 Score: 207 bits (528), Expect = 1.080e-61
Identity = 101/219 (46.12%), Postives = 146/219 (66.67%), Query Frame = 1
Query:  250 VTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFR--DGT--VDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVT-TKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLW 891
            V RM + ++DL+ +  +  EA++RG+GR FRSP ++ED+VK+IT CNMK+ GT+ MN  LC+K G+ G+FPTP ++     E LK+N +VGYRA+RI RLA++    DG   +D EWL    RT+ + F  + +LYGFG++AA N   LLG ++  P DSETVRHF++ HG   +     VA  A + Y+ +APYQFL YW+E+ V +E++RG     W
Sbjct:    5 VARMLRVSLDLQEFHAMVPEAKERGFGRTFRSPCLWEDLVKTITNCNMKWSGTVTMNLRLCDKVGKEGSFPTPKEILAKSPEWLKENCRVGYRAERIYRLAQAVEGMDGVERLDLEWLEHPSRTQADAFSKLLSLYGFGNFAAHNACQLLGHFDSFPFDSETVRHFREKHGANGSHKFPQVAKMAEKHYSAFAPYQFLAYWFELWVGYEERRGSTSTRW 223          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A061RIR0_9CHLO (Dna glycosylase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RIR0_9CHLO)

HSP 1 Score: 208 bits (529), Expect = 7.400e-61
Identity = 122/324 (37.65%), Postives = 173/324 (53.40%), Query Frame = 1
Query:    7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPE---AGEGGEKTTALRVDV------------------AAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNG-AFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYE-DIPL-DSETVRHFKDFHGVTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDATDF 906
            SYGY+ + PN W P+    D D G F RPL         +K  I+     +   +G  G++T   +V                     A LT  D+E   +  TR+ +   DL+ WF     A  RG+GR FRSPT+FEDMVK++T CN+KF+ TI+MN+LLC+ FG+ G AFP P DL     E LK  A+VGYRA RI+ LAK+F    ++ +W    +    EV K ++ L+GFG +A  NV  LLG Y+ DI   D+ET R   +  GV  +  + +   A ++Y  +AP+QFL YW+E+   +E++ G E   W    F
Sbjct:   86 SYGYFGLAPNMWFPADPCRDEDEGVFLRPLTLEHFSVKRSKYFIASNLDSQGILSGPEGQRTRTQQVAYMMICQAKKQRALLLGLWSTAALTTADIEVAXKSATRILRLDQDLREWFTSHPVAAARGFGRTFRSPTLFEDMVKTVTNCNIKFKRTIQMNELLCKHFGKGGVAFPDPEDLCNQSEESLKSLARVGYRAKRIISLAKAFHARELEQDWFENSDTPTSEVVKRLRALHGFGPFATSNVLQLLGRYDGDIRAWDTETSRLMSEL-GVRPQGGESLHSAAERRYQRFAPFQFLAYWFELWTNYEERAGAEATRWSPELF 408          
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Match: A0A518C028_9BACT (Uncharacterized protein n=1 Tax=Mucisphaera calidilacus TaxID=2527982 RepID=A0A518C028_9BACT)

HSP 1 Score: 205 bits (521), Expect = 8.860e-61
Identity = 109/290 (37.59%), Postives = 165/290 (56.90%), Query Frame = 1
Query:    7 SYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVAVPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRLSAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRNGAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAGERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHGVTT-KNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRG 873
            SYGY+L+ PNHW+  +              +  E   +T   S+  + V +  +G     A       +L   +   + +++ R+ +   D   W+ + A A +RG+GRLFRSPT++ED+VK+ITGCN  +  TIRMN+LL E+ GR GAFP+P  +    A  LK++ KVGYRA RI+ +A+ F DG++D  W  + ERT  EV++ ++ L G G YAA N+  LLG Y+ + +DSET RH+    G+    N K++ P     Y  Y PY+FL YWY++   +E + G
Sbjct:   27 SYGYFLLSPNHWDAER--------------QVFETTLATEDSSLIAIRVSQGDQGDPLVVACH----RKLDRGEGVRVKQRLGRVLRVDEDFTGWYAMHAGARRRGFGRLFRSPTLWEDIVKTITGCNTTWTSTIRMNRLLVERVGR-GAFPSPGQVRRYGAARLKEHVKVGYRAQRIVDVARGFLDGSIDAGWYASPERTAGEVYEALRGLNGIGPYAAANICQLLGHYDFLAIDSETYRHYCAVKGIERPSNDKELDPLIEAHYEGYRPYRFLAYWYDLWTAYEARVG 297          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig893.20300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L742_9PHAE5.390e-16373.48ENDO3c domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S0DQ45_9EUKA2.040e-7541.72Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A0G4H2A2_VITBC1.710e-7239.73Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A5C5V0E5_9BACT9.640e-6541.14ENDO3c domain-containing protein n=1 Tax=Posidonii... [more]
A0A5C5YQQ2_9BACT7.670e-6441.81HhH-GPD superfamily base excision DNA repair prote... [more]
A0A7S3YF63_9EUKA1.050e-6348.40Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A517TMY9_9BACT7.260e-6340.26ENDO3c domain-containing protein n=1 Tax=Planctomy... [more]
A0A7S2TEH0_9EUKA1.080e-6146.12Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A061RIR0_9CHLO7.400e-6137.65Dna glycosylase n=1 Tax=Tetraselmis sp. GSL018 Tax... [more]
A0A518C028_9BACT8.860e-6137.59Uncharacterized protein n=1 Tax=Mucisphaera calidi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig893contigF-serratus_M_contig893:52806..57811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score465.3
Seed ortholog evalue2.2e-128
Seed eggNOG ortholog2880.D8LSL8
Hectar predicted targeting categoryother localisation
EggNOG OGs2CN7D@1,2QUBQ@2759
Ec32 ortholog descriptionHhH-GPD domain
Ec32 orthologEc-09_002130.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size915
Cds size915
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig893.20300.1prot_F-serratus_M_contig893.20300.1Fucus serratus malepolypeptideF-serratus_M_contig893 52806..57811 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932601.3269897-CDS-F-serratus_M_contig893:52805..528981622932601.3269897-CDS-F-serratus_M_contig893:52805..52898Fucus serratus maleCDSF-serratus_M_contig893 52806..52898 -
1690964380.8579462-CDS-F-serratus_M_contig893:52805..528981690964380.8579462-CDS-F-serratus_M_contig893:52805..52898Fucus serratus maleCDSF-serratus_M_contig893 52806..52898 -
1622932601.3433282-CDS-F-serratus_M_contig893:53942..540411622932601.3433282-CDS-F-serratus_M_contig893:53942..54041Fucus serratus maleCDSF-serratus_M_contig893 53943..54041 -
1690964380.8702044-CDS-F-serratus_M_contig893:53942..540411690964380.8702044-CDS-F-serratus_M_contig893:53942..54041Fucus serratus maleCDSF-serratus_M_contig893 53943..54041 -
1622932601.3606834-CDS-F-serratus_M_contig893:54279..543911622932601.3606834-CDS-F-serratus_M_contig893:54279..54391Fucus serratus maleCDSF-serratus_M_contig893 54280..54391 -
1690964380.8793247-CDS-F-serratus_M_contig893:54279..543911690964380.8793247-CDS-F-serratus_M_contig893:54279..54391Fucus serratus maleCDSF-serratus_M_contig893 54280..54391 -
1622932601.3762739-CDS-F-serratus_M_contig893:54984..551241622932601.3762739-CDS-F-serratus_M_contig893:54984..55124Fucus serratus maleCDSF-serratus_M_contig893 54985..55124 -
1690964380.8908901-CDS-F-serratus_M_contig893:54984..551241690964380.8908901-CDS-F-serratus_M_contig893:54984..55124Fucus serratus maleCDSF-serratus_M_contig893 54985..55124 -
1622932601.3887322-CDS-F-serratus_M_contig893:55873..559221622932601.3887322-CDS-F-serratus_M_contig893:55873..55922Fucus serratus maleCDSF-serratus_M_contig893 55874..55922 -
1690964380.9056115-CDS-F-serratus_M_contig893:55873..559221690964380.9056115-CDS-F-serratus_M_contig893:55873..55922Fucus serratus maleCDSF-serratus_M_contig893 55874..55922 -
1622932601.4032652-CDS-F-serratus_M_contig893:56112..561681622932601.4032652-CDS-F-serratus_M_contig893:56112..56168Fucus serratus maleCDSF-serratus_M_contig893 56113..56168 -
1690964380.9156876-CDS-F-serratus_M_contig893:56112..561681690964380.9156876-CDS-F-serratus_M_contig893:56112..56168Fucus serratus maleCDSF-serratus_M_contig893 56113..56168 -
1622932601.4265542-CDS-F-serratus_M_contig893:56464..564891622932601.4265542-CDS-F-serratus_M_contig893:56464..56489Fucus serratus maleCDSF-serratus_M_contig893 56465..56489 -
1690964380.928792-CDS-F-serratus_M_contig893:56464..564891690964380.928792-CDS-F-serratus_M_contig893:56464..56489Fucus serratus maleCDSF-serratus_M_contig893 56465..56489 -
1622932601.4404707-CDS-F-serratus_M_contig893:56837..569231622932601.4404707-CDS-F-serratus_M_contig893:56837..56923Fucus serratus maleCDSF-serratus_M_contig893 56838..56923 -
1690964380.944412-CDS-F-serratus_M_contig893:56837..569231690964380.944412-CDS-F-serratus_M_contig893:56837..56923Fucus serratus maleCDSF-serratus_M_contig893 56838..56923 -
1622932601.4602017-CDS-F-serratus_M_contig893:57307..574641622932601.4602017-CDS-F-serratus_M_contig893:57307..57464Fucus serratus maleCDSF-serratus_M_contig893 57308..57464 -
1690964380.9574249-CDS-F-serratus_M_contig893:57307..574641690964380.9574249-CDS-F-serratus_M_contig893:57307..57464Fucus serratus maleCDSF-serratus_M_contig893 57308..57464 -
1622932601.4795914-CDS-F-serratus_M_contig893:57713..578111622932601.4795914-CDS-F-serratus_M_contig893:57713..57811Fucus serratus maleCDSF-serratus_M_contig893 57714..57811 -
1690964380.9687214-CDS-F-serratus_M_contig893:57713..578111690964380.9687214-CDS-F-serratus_M_contig893:57713..57811Fucus serratus maleCDSF-serratus_M_contig893 57714..57811 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig893.20300.1

>prot_F-serratus_M_contig893.20300.1 ID=prot_F-serratus_M_contig893.20300.1|Name=mRNA_F-serratus_M_contig893.20300.1|organism=Fucus serratus male|type=polypeptide|length=305bp
ATSYGYYLVPPNHWEPSKDANDRDGGTFSRPLRFGERLASTAKCSISQVA
VPEAGEGGEKTTALRVDVAAQLTDPDVEDIVRQVTRMFQTTIDLKPWFRL
SAEAEQRGYGRLFRSPTIFEDMVKSITGCNMKFQGTIRMNKLLCEKFGRN
GAFPTPYDLEGVQAEDLKDNAKVGYRADRILRLAKSFRDGTVDPEWLGAG
ERTRDEVFKFVKNLYGFGDYAAGNVTMLLGFYEDIPLDSETVRHFKDFHG
VTTKNVKDVAPKARQQYAPYAPYQFLQYWYEMIVWHEKKRGKEVHLWDAT
DFSW*
back to top

mRNA from alignment at F-serratus_M_contig893:52806..57811-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig893.20300.1 ID=mRNA_F-serratus_M_contig893.20300.1|Name=mRNA_F-serratus_M_contig893.20300.1|organism=Fucus serratus male|type=mRNA|length=5006bp|location=Sequence derived from alignment at F-serratus_M_contig893:52806..57811- (Fucus serratus male)
GCGACCAGCTACGGCTACTACCTCGTCCCACCCAACCACTGGGAGCCAAG CAAGGACGCCAATGACCGTGACGGAGGGACCTTCTCTCGACCTCTTAGGT GAAGCAGATTTGTCCAGCCGTACCTCTAGCTCTCCCGCGCAGTTCACGGC GAAGCGCGTACATTACGGTAAAAGTGCATGCACCCCGGATCGGAATCGCA CGCATCGACATGGGGATTCCGTTTCGACTTCACTATGTTCTTGGCGTGAC CCGCTAATATATATATATGTATGGTTTTCCACTCGTATCGAGGCGTAACT CGTTTGGCGCTTCGCTCGTCCATCTGGCACTTTATTATCCCGAAAAGGTT CGGCGAGCGCCTCGCAAGTACCGCCAAGTGCTCGATTTCCCAAGTAGCGG TGCCAGAAGCTGGGGAAGGAGGGGAGAAGACCACAGCGCTTCGGGTGGAT GTCGCTGCTCAGCTTACCGATCCCGACGTGGAGGACATCGTTCGACAAGT GACGGTGCGTGAGTTCTCGCTCTCCGTTTTATTTCATTCCAAGTCGTTCA AGCGACGTTCGCGCGCTGCTCCTGAAGAAAATGTGTTTTATCTTTTTTTT TTTAGCCTGCGGGGCAAAAGGTGCAGGCTTTTTATTGTTGGTTGGAGTAG AGCGTGAAACACCCTGTTACAGTAGTGTTGTACGCCATGTGTTCGGAAAG CATGCATCGACGTTATGAACTCTCTGGAGCTTCTTGTCGCCTCCACTTTT GCGGTTAGTGCGAACGTGCGCCCGAAGAAAACCCCGTCCAGATCACACGG CGTAACGTGGTGGGATCTCTCTCGCCATGACTTTCGTCCACTCCCCATGC ACGCCCGTTTCTTTCTGACACTGTCGCGCCTGCGGCAGAGAATGTTTCAA ACGACGATTGACCTGAAACCGTGGTTCCGCCTTAGCGCGGAGGCGGAGCA ACGTGGTTATGGAAGACTCTTCCGGTCAGTGCGACCGTCGCACGAACGTT TATTGTGTTTAAGATAGAATCAAGTCCCGTACAAGAATTGTTTTTTTGAT TGTGTTCAGGTTGTATGGCGTCTAATAGCATCATGCCGTGTCGTGTCGCA CAATCAGCTAAGAGTTCCGCGTTCGAGCGGCGAGGCTCCAACATTCGGGT ACGCGTTACACCGGCCAAGTCGTTGCCCCCCCCCCCCCCTGAGCCCGTCC CGCCTTCCTTCTTCCTTGTTGCTCTCCGTCTCTCCGGTACGACTTTTTCA CGAAAAAAACTTGTGCGCGGAATGTGAATTCGCGCATAATGTGACAACCA CCGGCGACCCAAACTACGCCAGATCTCCGACGATCTTCGAAGATATGGTA CAGTAACGCGCGTCTTTTATTTTACATCCATCGGCGGTTTGCCGCCATAG AGGTTGTTTAGACTGGCGTTAGGGCACCCTCGGCCCCCCAAGCTTGTGCG TTTTTTGCATAAACCACCGCACGATTCTCATCTTGGAACACTTCCTTTAG CTAATATAGGATAACCGAGTCATCATTTCTTCGCCTCTCACCTTAGTCGT TGTTGTTGCGCGCCTTACCTTAGCCCCGCGGTCGCCGCTCATGCACGCAC CCTCGCGGCGCGGCGCTTCTTGTGCGGCTGGCCTATCTGGCAGGTCAAGA GCATCACGGGATGCAACATGAAGTTCCAGGGGACGATCCGCATGAACAAG TGAGCACGCTACCACGCTACGGATATGTAAAATGCGATGCGGGAGGCGAC TGTGTATGTGAAGCGACTCGTAGTTTAAAAAGGATGGGGCTCCTTTTTTG TCCTTGCGCGCGACCGATGATCGTGTACTCCTTGGAATAATGTGCTCCAA ATCCGTGGCCCGTAATCTTTGCCGCCGTGTTCGCCACAGGCTCCTTTGCG AGAAATTCGGCCGAAATGGGGCGTTTCCAACTCCATACGTGAGACTTCTA AACGAACACACGAATAGGGCGTTGACGGTCATCATGCGATTATCAGGGGG GGGGGGGGGGGGGATGTTTGTTGGCAAAAGTGTCCTTCGTTGCTTCTGTT TCAGTATATCATAGGTTCGTGGCAACGTTCGACTTGTTGAATTGTCGAGA GGCGTTTCTCTTGAGGGTGCGCCACCATTCACACCATTGACACCATTGAC ATTGACACCATGCTACCTCTGTAGCCACGCACGTGAGCGCGCTTGGCTGC ATGCGATGTTTCGACGCTTATTGCCGTATGTAGCTGAAGAAATATATCCC CCTATTCCCGAACCAGAGCACGAAAGGGGCCCCGGTCGCCGCGCGGGCAG AATAGAAACGATCGCATTTATTGCCGGAATTTCGTTTTGTCTGCTGCATA GCTGGGTTGATTTGGCACAAAGCTCTTTACTACTGTGTCGTTCGATCGTG ACCGCAGTCAAGCGTTATGAAGAAGGACCGACGACTCACATTTTAAGCCG CACGCGACCGTCCTGTGTCGTCCCCCCCCATGAACCTGGGTGCCCATGTC CCTGCATGGAGGAAGGAGGGATTGATCGCCACAGGAAGTGCCGTACTTTT CATCCTCTGCTTTTTAAAGGGAGCACTTTTCCTGTAGGTCGCATTTTCCA TCCCAGAACATCCGTCACCGGCATCGTTTCCAGGCGTTTGTTTTTTCTTA CCTTAACCCTCACGCTTTTATACTATTTCTGGCAAAGGATCTGGAAGGGG TTCAAGCCGAAGACTTGAAGGACAATGCGAAGGTGGGCTACCGCGCCGAC CGAATTCTGAGACTGGCCAAGAGCTTTCGGGACGGGACGGTCGACCCGGA ATGGCTAGGCGCAGGGGAGCGGACTAGGTGACCATCGCAATAGCCGCTGA CGCGCGCAGGAGGCGTGTGTCTCGCATTTTTGCACTCGTCTCACTTTTTG TTTAATCCGTATCGTTTCCTCCCGGGTTGACGTCTTGGATTTTCGTTCCC ATATCCGCGGATCCGAAAATGCTCAATATTCAATAGTCAGTGTAGTGTGG TGTAGTGTAGTGTAGTGTAGTGTAGTGTAGTGTAGTGTAGTGTAGTGTAG TGTAGTGTACTGCGGTGTACTGTAGTATATTGTACTGTGGTGTAGTGTAG TGTAGTGTAGTGTAGTGTACTGCGGTGTACTGTAGTATATTGTACTGTGG TGTAGTGTAGTGTAGAGTGGTGTAGTGTAGTGTAGTGTAGTGTACTGTAG TATATTGTACTGTAGTGTAGTGTAGTGTAGTGTACTGCGGTGTACTGTAG TATAGTGTACTGTGGTGTAGTGTAGTGTGGTGTACAAAGTGCAAGACAGA GAGTATTATCGGGGGCTAAGGCGTATGGAGGGTTCAGAGAGAATTAAGTC AACACCTGGTTAGAAGTTAGCGCTAACACTTGGATTTCGTTCCCATGCCC GTGGATCCGAAAATGCTCAGGGACGAGGTTTTCAAGTTCGTCAAGAACTT GTACGGGTTTGGTGACTACGCCGCCGGCAACGTGACCATGCTGCTCGGTT TCTACGAGGACATCCCTCTGGACAGCGAAACGGTGGGTCTCGAGGTCCAC GTAATGTATTTCCCGTTCACGGTTGGGGGAACCTCCTCCCCCCCCCCCCT AAAAAATACCACGTCATAAATAAATAGATGGAATTGAAAAAAAAGCGAAG ATAATGGATCCACTAACTGGTGGCAAACACTTTTAAAAACGTCACAAAAC GTGCTCGTGCGTGTCATATACTGTATCCCTCTGATCTTCGACAACTCTCA CTTTGACTCATTTTGTGCAGGTGCGTCACTTCAAAGACTTCCATGGCGTC ACCACCAAGAACGTTAAAGATGTGGCACCCAAAGCCAGGCAACAGTACGC ACCCTACGCTCCATACCAGGTGCATGTTGGGGGGGGGGGGCACGGCTACG ATTGCTTCAAGTGTTTTGTGCATGGAGGTCGTGGTCGCCTCGAAACCCCT GACGTCGCTCCTTCTGTAGATGCAGCATGGCCATGAGGTGGTGTACCGCG TGAATGAATAACATATTTCCTTCTCTAAGGCTAGGTCGGATGAAAGGCTT CCATTCCCGGCGTTGTGGTAATTTGTGGTTACGGTTAGGACTGAGCTCTG GGAGGTGTTGTCATCGTCTCGTCTCTTACGTCGTCTGCACCCTCTTCTCT TACAAGATGGAATTTAAAATTATATATAATATAATATATATACATATATA TATACAATATGCATTTATACATAGATATAAAATATATTATATATATATGC CGGTCGCCCCGGTAGCTCAGAAGTACCTCGTAACCCTCTGACACGTTGGG ACGTGAGTTCGATCCCGGCAAAAGGGATTCTTCTCACTAAAAAACTAAAA AACAAAAATAAAAATGCCCAACGGGTGGAGAACGATAAAAATCGTTAGTA CACAAAATTCGACTTCACGGTCGGCGAGGGAAAGGAATGGGTGAATCCTT CTCGCGACAAAAATTAAGGCACGCACCGCAGAAGGAAGGTGGATGAGAAA TCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCATTGATG TCCAGAATGAATGGGAAGAAAACACACATATATATAGTCTATAATATATA CGTATTTATATATATACTATAAGATATATTATATATATATATTTAGTCTA TAATAAATACGTATTTTTATATATATATATTATATATTATATATATAGTC TATAATATTTATATATTATATATATATATATATATAGTTGAGTAAATTCT AATATTAGTGATTATCCGACGGCCATAAATTCAAACTATACTTGTAGTTT TGGTTCAAATAAGTTTAAATAATAAGTTGGGCACTTTTAGCCATGCATCA TGCAAGTGAAACGACAAACCCATTACGCCCCTCCCCCCCCTTTACTCGAT GCCCACGTTCCAGTTCTTGCAGTATTGGTACGAGATGATCGTGTGGCACG AGAAAAAACGAGGCAAAGAGGTGCACCTTTGGGATGCCACTGATTTCTCG TGGTAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig893:52806..57811-

>mRNA_F-serratus_M_contig893.20300.1 ID=mRNA_F-serratus_M_contig893.20300.1|Name=mRNA_F-serratus_M_contig893.20300.1|organism=Fucus serratus male|type=CDS|length=1830bp|location=Sequence derived from alignment at F-serratus_M_contig893:52806..57811- (Fucus serratus male)
GCGACCAGCTACGGCTACTACCTCGTCCCACCCAACCACTGGGAGCCAAG
CAAGGACGCCAATGACCGTGACGGAGGGACCTTCTCTCGACCTCTTAGGC
GACCAGCTACGGCTACTACCTCGTCCCACCCAACCACTGGGAGCCAAGCA
AGGACGCCAATGACCGTGACGGAGGGACCTTCTCTCGACCTCTTAGGTTC
GGCGAGCGCCTCGCAAGTACCGCCAAGTGCTCGATTTCCCAAGTAGCGGT
GCCAGAAGCTGGGGAAGGAGGGGAGAAGACCACAGCGCTTCGGGTGGATG
TCGCTGCTCAGCTTACCGATCCCGACGTGGAGGACATCGTTCGACAAGTG
ACGGTTCGGCGAGCGCCTCGCAAGTACCGCCAAGTGCTCGATTTCCCAAG
TAGCGGTGCCAGAAGCTGGGGAAGGAGGGGAGAAGACCACAGCGCTTCGG
GTGGATGTCGCTGCTCAGCTTACCGATCCCGACGTGGAGGACATCGTTCG
ACAAGTGACGAGAATGTTTCAAACGACGATTGACCTGAAACCGTGGTTCC
GCCTTAGCGCGGAGGCGGAGCAACGTGGTTATGGAAGACTCTTCCGAGAA
TGTTTCAAACGACGATTGACCTGAAACCGTGGTTCCGCCTTAGCGCGGAG
GCGGAGCAACGTGGTTATGGAAGACTCTTCCGATCTCCGACGATCTTCGA
AGATATGATCTCCGACGATCTTCGAAGATATGGTCAAGAGCATCACGGGA
TGCAACATGAAGTTCCAGGGGACGATCCGCATGAACAAGTCAAGAGCATC
ACGGGATGCAACATGAAGTTCCAGGGGACGATCCGCATGAACAAGCTCCT
TTGCGAGAAATTCGGCCGAAATGGGGCGTTTCCAACTCCATACGCTCCTT
TGCGAGAAATTCGGCCGAAATGGGGCGTTTCCAACTCCATACGATCTGGA
AGGGGTTCAAGCCGAAGACTTGAAGGACAATGCGAAGGTGGGCTACCGCG
CCGACCGAATTCTGAGACTGGCCAAGAGCTTTCGGGACGGGACGGTCGAC
CCGGAATGGCTAGGCGCAGGGGAGCGGACTAGGATCTGGAAGGGGTTCAA
GCCGAAGACTTGAAGGACAATGCGAAGGTGGGCTACCGCGCCGACCGAAT
TCTGAGACTGGCCAAGAGCTTTCGGGACGGGACGGTCGACCCGGAATGGC
TAGGCGCAGGGGAGCGGACTAGGGACGAGGTTTTCAAGTTCGTCAAGAAC
TTGTACGGGTTTGGTGACTACGCCGCCGGCAACGTGACCATGCTGCTCGG
TTTCTACGAGGACATCCCTCTGGACAGCGAAACGGGACGAGGTTTTCAAG
TTCGTCAAGAACTTGTACGGGTTTGGTGACTACGCCGCCGGCAACGTGAC
CATGCTGCTCGGTTTCTACGAGGACATCCCTCTGGACAGCGAAACGGTGC
GTCACTTCAAAGACTTCCATGGCGTCACCACCAAGAACGTTAAAGATGTG
GCACCCAAAGCCAGGCAACAGTACGCACCCTACGCTCCATACCAGGTGCG
TCACTTCAAAGACTTCCATGGCGTCACCACCAAGAACGTTAAAGATGTGG
CACCCAAAGCCAGGCAACAGTACGCACCCTACGCTCCATACCAGTTCTTG
CAGTATTGGTACGAGATGATCGTGTGGCACGAGAAAAAACGAGGCAAAGA
GGTGCACCTTTGGGATGCCACTGATTTCTCGTGGTAGTTCTTGCAGTATT
GGTACGAGATGATCGTGTGGCACGAGAAAAAACGAGGCAAAGAGGTGCAC
CTTTGGGATGCCACTGATTTCTCGTGGTAG
back to top