mRNA_F-serratus_M_contig83.19691.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: D8LIK8_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK8_ECTSI) HSP 1 Score: 140 bits (354), Expect = 5.580e-37 Identity = 63/85 (74.12%), Postives = 77/85 (90.59%), Query Frame = 1
Query: 4 VPSPRVLRELETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHIIKCLGTDANRAYSSDPDRVFTVLIGLFEGYGLQHIYSEDLE 258
+PSP ++R+LE V+GQLTDALRALAV+F +VGYCQGLDYVVAH+IKCLGTD +R ++SDPDRVF V++GLF YGL+HIYSEDLE
Sbjct: 1625 LPSPAMIRQLELVKGQLTDALRALAVSFGEVGYCQGLDYVVAHLIKCLGTDCHRGFASDPDRVFRVILGLFRDYGLEHIYSEDLE 1709
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: A0A6H5L5V9_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5V9_9PHAE) HSP 1 Score: 138 bits (348), Expect = 3.600e-36 Identity = 62/84 (73.81%), Postives = 75/84 (89.29%), Query Frame = 1
Query: 7 PSPRVLRELETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHIIKCLGTDANRAYSSDPDRVFTVLIGLFEGYGLQHIYSEDLE 258
PSP +R+LE V+GQLTDALRALAV+F +VGYCQGLDYVVAH+IKCLGTD +R ++SDP+RVF V++GLF YGL+HIYSEDLE
Sbjct: 1925 PSPTTIRQLELVKGQLTDALRALAVSFGEVGYCQGLDYVVAHLIKCLGTDCHRGFASDPERVFRVILGLFRDYGLEHIYSEDLE 2008
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: A0A484ED21_BRELC (Rab-GAP TBC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ED21_BRELC) HSP 1 Score: 62.0 bits (149), Expect = 2.730e-9 Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 34 ETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHII-KCLGTDANRAYSSDPDRVFTVLIGLFEGYGLQHIYSEDLE 258
E + QL++ L ALA F VGYCQG+DY+ AH++ + + A ++ + F +L+ LFE YGLQ++++ L+
Sbjct: 349 EDLTTQLSEILHALAGRFPTVGYCQGMDYIAAHLLNQVMNGKTTPATKAEAESTFWLLVTLFENYGLQNMFAPGLQ 424
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: A0A1V9Z5B5_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5B5_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.510e-8 Identity = 33/86 (38.37%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 34 ETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHIIKCL-GTDANRAYSSDPDRV----------FTVLIGLFEGYGLQHIYSEDLE 258
E ++ QL+ L ALA F VGYCQG+DY+ AHI++ + DA +S R F +L+ LFE YGL+ ++S L+
Sbjct: 296 EELQHQLSSILHALAGRFPDVGYCQGMDYIAAHILEHVKAADAEFGAASPVKRAAATQVQVEATFWILVALFESYGLRQMFSPGLQ 381
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: H3GPL4_PHYRM (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPL4_PHYRM) HSP 1 Score: 58.2 bits (139), Expect = 6.210e-8 Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 34 ETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHII-KCLGTDANRAYSSDPDRVFTVLIGLFEGYGLQHIYSEDL 255
E + QL++ L ALA F VGYCQG+DY+ AH++ K + A ++ + F +L+ LFE YGL +++ L
Sbjct: 360 EDLTTQLSEILHALAGRFPAVGYCQGMDYIAAHVLNKVKRSGAAADTKAEAENTFWLLVTLFEQYGLHEMFAPGL 434
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: A0A662WX69_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WX69_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.220e-8 Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 34 ETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHII-KCLGTDANRAYSSDPDRVFTVLIGLFEGYGLQHIYSEDL 255
E + QL++ L ALA F VGYCQG+DY+ AH++ K A + ++ + F +L+ LFE YGL +++ L
Sbjct: 389 EDLTNQLSEILHALAGRFPDVGYCQGMDYIAAHVLNKVKKRGAAQDARTEAESAFWLLVTLFERYGLHEMFAPGL 463
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: A0A1V9ZXI3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXI3_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 8.420e-8 Identity = 30/86 (34.88%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 34 ETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHIIKCLGTDANRAYSSDP-----------DRVFTVLIGLFEGYGLQHIYSEDLE 258
E ++ QL+ L ALA F VGYCQG+DY+ AHI++ + + +P + F +L+ LFE YGL+ ++S L+
Sbjct: 295 EELQHQLSSILHALAGKFPDVGYCQGMDYISAHILEHVKAADRKFGDHEPVKRAAATQVQVETTFWILVALFESYGLRQMFSPGLQ 380
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: A0A3M6VHM9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHM9_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 8.490e-8 Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 34 ETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHIIKCLGTDANRAYSSDP-DRVFTVLIGLFEGYGLQHIYSEDL 255
E + QL++ L ALA F VGYCQG+DY+ AH++ + + + + D + + +L+ LFE YGLQ +++ L
Sbjct: 364 EDLTTQLSEILHALAGRFPAVGYCQGMDYIAAHVLNKVKSSGSAHDTKDEAESTYWLLVTLFEQYGLQDMFAPGL 438
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: A0A3F2RC15_9STRA (Rab-GAP TBC domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RC15_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.150e-7 Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 34 ETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHI---IKCLGTDANRAYSSDPDRVFTVLIGLFEGYGLQHIYSEDL 255
E + QL++ L ALA F VGYCQG+DYV AH+ +K GT + ++ + F +L+ LFE YGL +++ L
Sbjct: 317 EDLTNQLSEILHALAGRFPAVGYCQGMDYVAAHVLNKVKRGGTTCDT--KTESESAFWLLVTLFEQYGLHDMFAPGL 391
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Match: A0A6G0WSL6_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSL6_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.150e-7 Identity = 27/83 (32.53%), Postives = 47/83 (56.63%), Query Frame = 1
Query: 40 VRGQLTDALRALAVAFSKVGYCQGLDYVVAHIIKCL-----------GTDANRAYSSDPDRVFTVLIGLFEGYGLQHIYSEDL 255
++ Q+++ L ALA F +VGYCQG+DY+ AH+++ + G +R + + F ++ LFE YGL+ ++S L
Sbjct: 297 IQEQMSNVLHALAGRFPEVGYCQGMDYITAHVLEHVKAADASYAHIHGETKHRVMVAQEETTFWLMASLFESYGLRDMFSPGL 379 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig83.19691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig83.19691.1 >prot_F-serratus_M_contig83.19691.1 ID=prot_F-serratus_M_contig83.19691.1|Name=mRNA_F-serratus_M_contig83.19691.1|organism=Fucus serratus male|type=polypeptide|length=86bp FVPSPRVLRELETVRGQLTDALRALAVAFSKVGYCQGLDYVVAHIIKCLGback to top mRNA from alignment at F-serratus_M_contig83:547128..548120- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig83.19691.1 ID=mRNA_F-serratus_M_contig83.19691.1|Name=mRNA_F-serratus_M_contig83.19691.1|organism=Fucus serratus male|type=mRNA|length=993bp|location=Sequence derived from alignment at F-serratus_M_contig83:547128..548120- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig83:547128..548120- >mRNA_F-serratus_M_contig83.19691.1 ID=mRNA_F-serratus_M_contig83.19691.1|Name=mRNA_F-serratus_M_contig83.19691.1|organism=Fucus serratus male|type=CDS|length=516bp|location=Sequence derived from alignment at F-serratus_M_contig83:547128..548120- (Fucus serratus male)back to top |