mRNA_F-serratus_M_contig826.19664.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig826.19664.1
Unique NamemRNA_F-serratus_M_contig826.19664.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A6H5JIK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK7_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 8.580e-126
Identity = 196/280 (70.00%), Postives = 232/280 (82.86%), Query Frame = 2
Query:   83 PFLVLVFAVKTTIGFLVMS-PMSPNAL----WLSSYQGPLRGRLR-AQDEVGLR-RKARRSE-LNMEVEPHILRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            P   L F  KT +GF+  S  ++P+A     W+  +  P R R R A D VG R R+ RRS  L+MEVEPH+LRLQAAELGSRL+GTNV+FVGMMGTGKSTVARALADVMGRYIFLDTD+IIEELLG SV EVFA DGEEAFRSVESQVLDQVHSYVK CVATGGGIV++ KNWG++ +GMVVWLDM+PKDI  R+ + PE++AKRPLL+G++P+ +LE ++E R+PQYAQADV V+LKPEDGVDD+T+NVVN ILEFI+SNPPKWQ+WKEKA  AGIEW
Sbjct:   15 PLFALCFVAKTAVGFIAPSLHVAPSAATPLKWVHQHSIP-RTRCRVAGDTVGFRERRMRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMKPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNAILEFIDSNPPKWQKWKEKANAAGIEW 293          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: D8LTH1_ECTSI (Shikimate Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH1_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 1.810e-122
Identity = 175/222 (78.83%), Postives = 203/222 (91.44%), Query Frame = 2
Query:  236 RRSELNMEVEPHILRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEWA 901
            R + L+MEVEPH+LRLQAAELGSRL+GTNV+FVGMMGTGKSTVARALADVMGRYIFLDTD+IIEELLG SV EVFA DGEE FRSVESQVLDQVHSYVK CVATGGGIV++ KNWG++ +GMVVWLDMEPKDI  R+ + PE++AKRPLL+G++P+ +LE ++E R+PQYAQADV V+LKPEDGVDD+T+NVVNTILEFI+SNPPKWQ+WKEKA  AGIEWA
Sbjct:    3 RSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWA 224          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A835ZK89_9STRA (Shikimate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK89_9STRA)

HSP 1 Score: 244 bits (622), Expect = 4.160e-75
Identity = 120/214 (56.07%), Postives = 162/214 (75.70%), Query Frame = 2
Query:  275 LRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQA------DVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            +RLQ AELGS+L+GTNVYFVGMMGTGK++VAR LAD MGRY F+DTD+IIE+L+   V++VF   GEE FR +E++VL+++HSYVK  VATGGGIV +K+NWG+L +G+VVWLDM   DI+ R+    E+++KR LL G +  A+L+AI + R+  Y QA      DVRV + P+D VD V  + V+ + +FI+SNPPKWQQWK+ A+ +GI W
Sbjct:   18 IRLQTAELGSQLRGTNVYFVGMMGTGKTSVARNLADRMGRYTFMDTDAIIEQLMQAPVAKVFEEQGEEEFRDIEARVLNELHSYVKLVVATGGGIVKEKRNWGKLQTGLVVWLDMAIDDIVKRLSSNEEEVSKRSLLQGGDVAAKLQAIYDERKAMYEQASTSSSADVRVYVSPDDSVDAVVLSSVSELQKFIDSNPPKWQQWKDSAKASGINW 231          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A6U3Q8M5_9STRA (Shikimate kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8M5_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.800e-58
Identity = 100/202 (49.50%), Postives = 142/202 (70.30%), Query Frame = 2
Query:  296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPED-GVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            LG RL+G+N+YFVGMMG+GKS V  A+A  MG Y FLDTD+IIE +   +++E+FA +GE+ FR +ESQVLD VH++V+  V+TGGGIV +  NW +L SG+V+W+D+ P  I  RI ++ +    RPLL  +NP   LE ++E R+P+Y+QADVR+E+  E   ++DV   VV  +  FI+ NPP W+  K KAQ  G++W
Sbjct:   96 LGPRLQGSNLYFVGMMGSGKSAVGDAVARRMGSYNFLDTDTIIESVTNATITEIFAQEGEDTFRDIESQVLDSVHAHVRCVVSTGGGIVKKLSNWAKLQSGVVIWIDVPPSVIYNRIKDKDD----RPLLQNDNPLETLEKLLEERKPRYSQADVRIEVNDESMSIEDVASKVVQDLHNFIDENPPAWKIAKAKAQAEGLDW 293          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A448ZQW6_9STRA (Shikimate kinase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQW6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.520e-56
Identity = 100/201 (49.75%), Postives = 140/201 (69.65%), Query Frame = 2
Query:  296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            LG RL+G+N+Y VGMMG+GKS+V   LA  MG Y FLDTD IIE+    +++E+F ++GEE FR VESQVLD VH+YV+  V+TGGG+V + KNWG+L +G+VVWLD+ P+ IL R+    E    RPLL  ++P   L+ ++E R P+Y QAD+RVE+  +   D V   +V  +  FI+ NPP W+  K+KAQ+ G++W
Sbjct:  102 LGPRLQGSNLYLVGMMGSGKSSVGDKLARRMGSYKFLDTDEIIEKATKLTINEIFESEGEEGFRDVESQVLDTVHAYVRCVVSTGGGLVCKPKNWGKLQTGIVVWLDVAPEVILKRV----EGNEDRPLLKTKDPLQTLKDLLEERTPKYNQADLRVEITEDMDEDAVASRIVLDLHNFIDDNPPAWKLAKQKAQEEGLDW 298          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A1Z5KE71_FISSO (Shikimate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE71_FISSO)

HSP 1 Score: 196 bits (498), Expect = 4.740e-56
Identity = 95/201 (47.26%), Postives = 137/201 (68.16%), Query Frame = 2
Query:  296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            L  RL G N+YF+GMMG+GK++V  A+A  MG Y FLDTD+IIE+    ++ E+F  +GEE FR VE+Q+LD VH YV+  ++TGGGIVT+ +NW +L +G+V+WLD+EP+ I+ RI     Q   RPLL  E+P  +L+A++E R+P+Y  AD+RV++  E     V   V+  +  FI+ NPP W+  K KAQ  G++W
Sbjct:   78 LSPRLNGANLYFIGMMGSGKTSVGEAVARRMGSYTFLDTDAIIEKATKMTIPEIFEAEGEEGFRQVEAQILDSVHPYVRCVISTGGGIVTRMENWSKLQTGLVIWLDVEPEVIIKRI-----QGTDRPLLQTEDPLKKLKALLEERKPKYKNADIRVKVTEEMDTAAVADQVIYDLHHFIDDNPPAWKLAKAKAQAEGLDW 273          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A7S2U848_9STRA (Shikimate kinase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U848_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.820e-54
Identity = 92/201 (45.77%), Postives = 134/201 (66.67%), Query Frame = 2
Query:  296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            L  RL+GTN+YF+GMMG+GKS V   +A  MG Y FLDTD IIE+    S+  +F  +GEE FRS+E+QVLD VH+YV+  ++TGGG V +  NW +  +G+V+WLD++P  +++R+     Q   RPLL  ENP   LE ++E R  +Y+QAD+++++ PE   + V   V+  +  FI+ NPP W+Q K KAQ  G++W
Sbjct:   98 LAPRLQGTNIYFIGMMGSGKSAVGDVVARRMGSYNFLDTDEIIEKATSMSIPSIFEAEGEEGFRSIEAQVLDSVHAYVRCVISTGGGAVCRLSNWSKFQTGIVIWLDVDPDTLISRM-----QGTDRPLLQTENPLETLETLLEERTSRYSQADIQLKITPEMDANAVAEMVIKELHFFIDENPPAWKQAKAKAQAEGLDW 293          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A7S1Z366_TRICV (Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z366_TRICV)

HSP 1 Score: 193 bits (490), Expect = 2.690e-54
Identity = 99/215 (46.05%), Postives = 144/215 (66.98%), Query Frame = 2
Query:  254 MEVEPHILRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            M+++P      A  LG RL+G+N+YF+GMMG+GKS V   +A  MG Y FLDTDSIIE+  G ++ E+F  +GEE FR VE Q+LD VH+YV+  V+TGGGIV + +NW +L +G+VVWLD++P+ I+ RI    E    RPLL  ++P  +L+ ++  R  +YAQAD+R+E+  +   D V   V+  +  FI+ NPP W++ K KAQ  G++W
Sbjct:  115 MKIDP------ARLLGPRLQGSNLYFIGMMGSGKSAVGDIVARRMGTYNFLDTDSIIEKATGMTIPEIFEAEGEEGFRQVEGQILDSVHAYVRCVVSTGGGIVCRLQNWAKLQTGLVVWLDVDPEVIIKRI----EGDENRPLLQTDDPLKKLKDLLGEREERYAQADLRIEVTEDMDEDAVANMVIKELHYFIDENPPAWKKAKAKAQADGLDW 319          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A7R9ZGS2_9STRA (Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGS2_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.590e-54
Identity = 98/215 (45.58%), Postives = 143/215 (66.51%), Query Frame = 2
Query:  254 MEVEPHILRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            M+++P      A  LG RL+G+N+YFVGMMG+GKS V   +A  MG Y FLDTD IIE+    S+ E+F  +GEE FR  E+QVLD VH+YV+  ++TGGG+V +  NW +L +G+V+WLD++P+ I+ RI    E    RPLL  ++P  +L+ ++E RR +Y+QADVR+E+  +   + V   VV  +  FI+ NPP W++ K KAQ  G++W
Sbjct:   90 MKIDP------ARLLGPRLQGSNLYFVGMMGSGKSAVGDVVARRMGTYNFLDTDEIIEKATAMSIPEIFDAEGEEGFREAEAQVLDSVHAYVRCVISTGGGLVCRMGNWSKLQTGVVIWLDVDPELIIKRI----EGDTNRPLLQADDPLQKLKDLLEERREKYSQADVRIEVTEDMDENAVADLVVKELHNFIDENPPAWKKAKAKAQAEGLDW 294          
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: B7GAC8_PHATC (Shikimate kinase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAC8_PHATC)

HSP 1 Score: 190 bits (482), Expect = 1.170e-53
Identity = 94/201 (46.77%), Postives = 133/201 (66.17%), Query Frame = 2
Query:  296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
            LG RL G+NVYFVG+MG+GKS V   LA  MG Y FLDTD IIE   G ++ E+F  +GEE FR+VE+QVLD VH YV+  ++TGGGIV + +NW +L +G+VVWLD EP+ I+ RI     +   RPLL  +NP  +L+ ++  R  +Y+QAD+R+++  +   + V    +  +  FI+ NPP W+  K KAQ  G++W
Sbjct:   80 LGPRLNGSNVYFVGIMGSGKSAVGDILARRMGTYNFLDTDEIIERATGMTIPEIFKAEGEEGFRTVEAQVLDSVHPYVRCIISTGGGIVIKLENWSKLQTGLVVWLDCEPEVIMRRI-----EGTDRPLLQTDNPLQKLKDLLAEREDKYSQADIRIKVTEDMDTEHVADLAIRELHNFIDENPPAWKLAKSKAQAEGLDW 275          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIK7_9PHAE8.580e-12670.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH1_ECTSI1.810e-12278.83Shikimate Kinase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835ZK89_9STRA4.160e-7556.07Shikimate kinase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A6U3Q8M5_9STRA1.800e-5849.50Shikimate kinase n=1 Tax=Ditylum brightwellii TaxI... [more]
A0A448ZQW6_9STRA2.520e-5649.75Shikimate kinase n=1 Tax=Pseudo-nitzschia multistr... [more]
A0A1Z5KE71_FISSO4.740e-5647.26Shikimate kinase n=2 Tax=Fistulifera solaris TaxID... [more]
A0A7S2U848_9STRA1.820e-5445.77Shikimate kinase n=1 Tax=Attheya septentrionalis T... [more]
A0A7S1Z366_TRICV2.690e-5446.05Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1... [more]
A0A7R9ZGS2_9STRA3.590e-5445.58Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=... [more]
B7GAC8_PHATC1.170e-5346.77Shikimate kinase n=2 Tax=Phaeodactylum tricornutum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig826contigF-serratus_M_contig826:170956..174339 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.0
Seed ortholog evalue2e-99
Seed eggNOG ortholog2880.D8LTH1
Preferred nameSK2
KEGG rclassRC00002,RC00078
KEGG koko:K00891
KEGG ReactionR02412
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00022
Hectar predicted targeting categorysignal peptide
GOsGO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009507,GO:0009536,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615
EggNOG free text desc.shikimate metabolic process
EggNOG OGs2QTKR@2759,COG0703@1
EC2.7.1.71
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons4
Model size1357
Cds size864
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig826.19664.1prot_F-serratus_M_contig826.19664.1Fucus serratus malepolypeptideF-serratus_M_contig826 170996..173886 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932452.2010565-UTR-F-serratus_M_contig826:170955..1709951622932452.2010565-UTR-F-serratus_M_contig826:170955..170995Fucus serratus maleUTRF-serratus_M_contig826 170956..170995 +
1690964315.5482845-UTR-F-serratus_M_contig826:170955..1709951690964315.5482845-UTR-F-serratus_M_contig826:170955..170995Fucus serratus maleUTRF-serratus_M_contig826 170956..170995 +
1622932452.281757-UTR-F-serratus_M_contig826:173886..1743391622932452.281757-UTR-F-serratus_M_contig826:173886..174339Fucus serratus maleUTRF-serratus_M_contig826 173887..174339 +
1690964315.6162531-UTR-F-serratus_M_contig826:173886..1743391690964315.6162531-UTR-F-serratus_M_contig826:173886..174339Fucus serratus maleUTRF-serratus_M_contig826 173887..174339 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932452.216156-CDS-F-serratus_M_contig826:170995..1712681622932452.216156-CDS-F-serratus_M_contig826:170995..171268Fucus serratus maleCDSF-serratus_M_contig826 170996..171268 +
1690964315.5614326-CDS-F-serratus_M_contig826:170995..1712681690964315.5614326-CDS-F-serratus_M_contig826:170995..171268Fucus serratus maleCDSF-serratus_M_contig826 170996..171268 +
1622932452.2395384-CDS-F-serratus_M_contig826:172867..1731761622932452.2395384-CDS-F-serratus_M_contig826:172867..173176Fucus serratus maleCDSF-serratus_M_contig826 172868..173176 +
1690964315.5724165-CDS-F-serratus_M_contig826:172867..1731761690964315.5724165-CDS-F-serratus_M_contig826:172867..173176Fucus serratus maleCDSF-serratus_M_contig826 172868..173176 +
1622932452.2557597-CDS-F-serratus_M_contig826:173498..1736271622932452.2557597-CDS-F-serratus_M_contig826:173498..173627Fucus serratus maleCDSF-serratus_M_contig826 173499..173627 +
1690964315.5837605-CDS-F-serratus_M_contig826:173498..1736271690964315.5837605-CDS-F-serratus_M_contig826:173498..173627Fucus serratus maleCDSF-serratus_M_contig826 173499..173627 +
1622932452.2693-CDS-F-serratus_M_contig826:173733..1738861622932452.2693-CDS-F-serratus_M_contig826:173733..173886Fucus serratus maleCDSF-serratus_M_contig826 173734..173886 +
1690964315.5993836-CDS-F-serratus_M_contig826:173733..1738861690964315.5993836-CDS-F-serratus_M_contig826:173733..173886Fucus serratus maleCDSF-serratus_M_contig826 173734..173886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig826.19664.1

>prot_F-serratus_M_contig826.19664.1 ID=prot_F-serratus_M_contig826.19664.1|Name=mRNA_F-serratus_M_contig826.19664.1|organism=Fucus serratus male|type=polypeptide|length=288bp
MGKVIDSRTVKYAFPFLVLVFAVKTTIGFLVMSPMSPNALWLSSYQGPLR
GRLRAQDEVGLRRKARRSELNMEVEPHILRLQAAELGSRLKGTNVYFVGM
MGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRS
VESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILA
RIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGV
DDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEWA*
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mRNA from alignment at F-serratus_M_contig826:170956..174339+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig826.19664.1 ID=mRNA_F-serratus_M_contig826.19664.1|Name=mRNA_F-serratus_M_contig826.19664.1|organism=Fucus serratus male|type=mRNA|length=3384bp|location=Sequence derived from alignment at F-serratus_M_contig826:170956..174339+ (Fucus serratus male)
AGTTGAGCGCTACGCCGTTGTACTCGGCGGCATCCAACCAATGGGTAAAG TCATCGATAGTCGAACCGTAAAATATGCGTTTCCTTTCTTGGTGCTCGTC TTCGCGGTAAAAACCACGATCGGGTTTCTCGTGATGTCCCCGATGTCTCC AAACGCATTGTGGCTTAGTTCGTATCAAGGCCCCTTGCGAGGCCGACTTC GCGCTCAGGACGAAGTTGGTCTCCGCCGAAAGGCTCGGCGATCGGAACTT AACATGGAAGTGGAGCCGCACATCCTTAGGCTACAAGCAGCAGAACTTGG TTCGAGGCTGAAGGTCTGAAATCATGTATGTTCATGAGTACACATACAAC TCACCGGACATAACAGTGTTTGATGATGTTTTGTCTCGCTGTTTTTATGG TGTCCCTTCATGGCGATTAATGTAAGTAAGTGTACAGCAGTATAACGGTG GGTCTCTCCCCGATATTATACTGTTGACCTGATGGCACCACCATAGGGGA ACCCGTTTAAATGCCATGAAGAGGGTTTGTATTTGCAGCCTTTGAGCCGA CCTGAACGTTTTGACATTTTTTCCCCCTAACTGGGGGATGCTCAGAAGGT CTAGGTGCGTTCTGTATTTTCTTCAAACAGTGATCATAAGGTCTAGGCGC GTTCTAGTTTTTCTAGAAACAGTATTAAATCATCTACACCCGAACCGCAT CCAAGCCTTCCGAGTACCAACACTAATTAATAGTTAATAGGGGGGAAAAC TGTCAGCACAAAAACTCTACTCGGTACACAGTTGTAGGCCTGCTGTATAA CTCCTTCCTTGTGTACGTATGGTCGGTTTCTCGGGACGTGTTCCTCAATA CTTATGCCCGTCAGTCCCTATTTCTCCGTGTTCATGTTTGAGAAAGGTGA TGTCACTACTGTACAGGACACGCGGCCGAGTCCGTAGAGCGCAACTCATT GCTGGATGCCAGATAGTGCACCCCGGTGCATGCTGCGGAAGGGATGCGTC TCGTAGCTTTGGGAACCAAATTCAAGTACTTGTTGCGCACAAATTTGTAC TGGTATTGAGTAAAGGATTGACTCTAACACGATAGCTGTTATTTTTTCCC GTTCAAATGAAAACAATTTTCTCACCTAAACCTTTTGATTGCTCAGGAGG TTTAGCCTCGTTCAGATTTTTCTTCATTTTTCTCAACTCCAGCATGATAC TATCCGAGCCTAGTCTAGAGCTTTAGCATATGTCAATACCATCGGGGAAC CCGAAGAGGTTTTGTCTTTGCATGATCCCACCTAAACGTTTTGACATTTT CCCCCCTGACTGGGGGATGCTCAGAAGGTTTAGATGCGTTCAGATTTTTC TTTGAATACTGTATGATAGCTCTATCATTATTCAATAACCTTGGTAGAAT TTGCCCGCCCAAGTATTTTTCAGCTTTTTCATGAATTATGTGCATCTGCT TGACCCTTGCCTATTACTCTAACTATATCGATAGTAGAACCTTGCAACTG TTTGTCCAACTACAGTACCGTTAAAGATTTGGGTAGTCCGTCTTGGCATC GTCTATGATTCCTACAGTTGTGCAGCATCAAACGACGAAGCGGAGACCGA GCGAATTCAAGTCTAGCAAGCCAGGAAGGATCTGGCTGTACGATACGTGC GATGAAAAGGTTTTGGTAACAAGAACGAAGCAGGTTACAATGGGGCAGCT GAACAAACACTAGTATGCACCACACCAGTCACCGCCTACTCTGTGGTGGT ATCATATTTCTATGAATGGTCAAAGGGGCAGGTCAAGCAAATGCCGATAC AAGGTAGTGCGTTTAGTCTTTCCCTCCATTTTCATCACGACACGAATAGT TCAGCCCTGGGAGGCGGTGCTTCCGCCCTCCCCGCCATATGAAACGCTTT TCGCCCGCTCAGGGTACGAACGTGTACTTCGTTGGAATGATGGGAACGGG AAAATCAACCGTTGCTCGTGCCCTCGCGGACGTGATGGGTCGGTACATCT TCTTAGACACTGACTCCATCATCGAAGAGCTCCTAGGGACGAGCGTTAGC GAAGTTTTCGCGACCGACGGGGAAGAGGCATTTCGTAGCGTGGAGAGCCA GGTGTTGGACCAGGTTCACTCGTATGTCAAGACCTGCGTTGCAACTGGTG GTGGCATCGTCACTCAGAAAAAGAACTGGGGGAGGCTGCATTCCGGGATG GTAGTTTGGCTGGACATGGAGGTGAGGCTTCAAACGTTGATATTAATAAA TGTGACGGGCGGTTAGACGCCTCCACTCGATGTGCTTTGACCACTTGGTG GTAGGTAGACTGTTAATGTTGCTGGTTCTACCCGTTTGAGTCGTTGAAAA TTTCTCCTGAGACTGAAGCAACATATCTTGACCAAGAGGGCTTCGATCTC TCGAGCCGGCTCAATTTTCTCGAGAATTAGTTTGTGCTTTCCTCTTCCTC GAACATTGCTAATAGCATTACCATACTTTCAACGTATTTGCGTGCCCGGC TGTGATTCCGTACATCGGGTGCCAACGGTACTGTTGCTTGTAGCCCAAGG ACATACTAGCGAGAATTGGTGAACAACCGGAGCAAATGGCGAAGAGGCCA CTTCTGTCTGGGGAAAACCCTGAGGCGCAGCTTGAGGCGATCATGGAGAA CAGAAGACCCCAATACGCACAGGTTTGTGTGCTTCGGACTCTCGCCATTA ATCCTTTAAATATGTCGGGAGCAGGATTTGTTATATAATTAAAGCGGCTA AACAACACGTGCTTATCGTATCCTTCAGGCGGACGTGCGCGTGGAGCTGA AGCCTGAGGATGGCGTGGACGACGTGACGTTCAATGTTGTCAACACTATC CTAGAGTTTATCGAAAGCAATCCCCCCAAATGGCAACAATGGAAGGAGAA GGCGCAGCAGGCGGGAATCGAGTGGGCGTGACTCGGTCCGTCGTTGACTC ATTTGTACAAGAGGTGTATGTAAAGGAGCCCACAGATGGCTAGTTTTTTA CTTTGTTTGAGAATTGTTCATATGGGAGTAAGGTGAGGCGCAACGGCACG CCATTAGTACTTGGATCGTCTCTAGCGATGCAGGGCTAATCCATGCATCA CTGTCACTGCTGCGTCTGTGATAGTTCTGATGTCGAACAAATGATGAAAA ACAGCACATCAGGACATCTACGGGAAATATCAGCAGGGTGTTTCTTTCAT GATGGCGACTCATTATCCGGTGACGAGAGATCAACACACGTGTGGCCTCT TGTCTAGACGTTACCAGTCATCATCTATCCGGTTCTTGTTGACGTGGCCT TGGGTGTTCGAGTGAGGAACACGCCCAGAAGGATTGGAAAATCGTTTTAT GCCAAGTAGTTTTCCTACTGCAGCTCTTTTTCAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig826:170956..174339+

>mRNA_F-serratus_M_contig826.19664.1 ID=mRNA_F-serratus_M_contig826.19664.1|Name=mRNA_F-serratus_M_contig826.19664.1|organism=Fucus serratus male|type=CDS|length=1728bp|location=Sequence derived from alignment at F-serratus_M_contig826:170956..174339+ (Fucus serratus male)
ATGGGTAAAGTCATCGATAGTCGAACCGTAAAATATGCGTTTCCTTTCTT
GGTGCTCGTCTTCGCGGTAAAAACCACGATCGGGTTTCTCGTGATGTCCC
CGATGTCTCCAAACGCATTGTGGCTTAGTTCGTATCAAGGCCCCTTGCGA
GGCCGACTTCGCGCTCAGGACGAAGTTGGTCTCCGCCGAAAGGCTCGGCG
ATCGGAACTTAACATGGAAGTGGAGCCGCACATCCTTAGGCTACAAGCAG
CAGAACTTGGTTCGAGGCTGAAGATGGGTAAAGTCATCGATAGTCGAACC
GTAAAATATGCGTTTCCTTTCTTGGTGCTCGTCTTCGCGGTAAAAACCAC
GATCGGGTTTCTCGTGATGTCCCCGATGTCTCCAAACGCATTGTGGCTTA
GTTCGTATCAAGGCCCCTTGCGAGGCCGACTTCGCGCTCAGGACGAAGTT
GGTCTCCGCCGAAAGGCTCGGCGATCGGAACTTAACATGGAAGTGGAGCC
GCACATCCTTAGGCTACAAGCAGCAGAACTTGGTTCGAGGCTGAAGGGTA
CGAACGTGTACTTCGTTGGAATGATGGGAACGGGAAAATCAACCGTTGCT
CGTGCCCTCGCGGACGTGATGGGTCGGTACATCTTCTTAGACACTGACTC
CATCATCGAAGAGCTCCTAGGGACGAGCGTTAGCGAAGTTTTCGCGACCG
ACGGGGAAGAGGCATTTCGTAGCGTGGAGAGCCAGGTGTTGGACCAGGTT
CACTCGTATGTCAAGACCTGCGTTGCAACTGGTGGTGGCATCGTCACTCA
GAAAAAGAACTGGGGGAGGCTGCATTCCGGGATGGTAGTTTGGCTGGACA
TGGAGGGTACGAACGTGTACTTCGTTGGAATGATGGGAACGGGAAAATCA
ACCGTTGCTCGTGCCCTCGCGGACGTGATGGGTCGGTACATCTTCTTAGA
CACTGACTCCATCATCGAAGAGCTCCTAGGGACGAGCGTTAGCGAAGTTT
TCGCGACCGACGGGGAAGAGGCATTTCGTAGCGTGGAGAGCCAGGTGTTG
GACCAGGTTCACTCGTATGTCAAGACCTGCGTTGCAACTGGTGGTGGCAT
CGTCACTCAGAAAAAGAACTGGGGGAGGCTGCATTCCGGGATGGTAGTTT
GGCTGGACATGGAGCCCAAGGACATACTAGCGAGAATTGGTGAACAACCG
GAGCAAATGGCGAAGAGGCCACTTCTGTCTGGGGAAAACCCTGAGGCGCA
GCTTGAGGCGATCATGGAGAACAGAAGACCCCAATACGCACAGCCCAAGG
ACATACTAGCGAGAATTGGTGAACAACCGGAGCAAATGGCGAAGAGGCCA
CTTCTGTCTGGGGAAAACCCTGAGGCGCAGCTTGAGGCGATCATGGAGAA
CAGAAGACCCCAATACGCACAGGCGGACGTGCGCGTGGAGCTGAAGCCTG
AGGATGGCGTGGACGACGTGACGTTCAATGTTGTCAACACTATCCTAGAG
TTTATCGAAAGCAATCCCCCCAAATGGCAACAATGGAAGGAGAAGGCGCA
GCAGGCGGGAATCGAGTGGGCGTGAGCGGACGTGCGCGTGGAGCTGAAGC
CTGAGGATGGCGTGGACGACGTGACGTTCAATGTTGTCAACACTATCCTA
GAGTTTATCGAAAGCAATCCCCCCAAATGGCAACAATGGAAGGAGAAGGC
GCAGCAGGCGGGAATCGAGTGGGCGTGA
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