mRNA_F-serratus_M_contig826.19664.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A6H5JIK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK7_9PHAE) HSP 1 Score: 375 bits (964), Expect = 8.580e-126 Identity = 196/280 (70.00%), Postives = 232/280 (82.86%), Query Frame = 2
Query: 83 PFLVLVFAVKTTIGFLVMS-PMSPNAL----WLSSYQGPLRGRLR-AQDEVGLR-RKARRSE-LNMEVEPHILRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
P L F KT +GF+ S ++P+A W+ + P R R R A D VG R R+ RRS L+MEVEPH+LRLQAAELGSRL+GTNV+FVGMMGTGKSTVARALADVMGRYIFLDTD+IIEELLG SV EVFA DGEEAFRSVESQVLDQVHSYVK CVATGGGIV++ KNWG++ +GMVVWLDM+PKDI R+ + PE++AKRPLL+G++P+ +LE ++E R+PQYAQADV V+LKPEDGVDD+T+NVVN ILEFI+SNPPKWQ+WKEKA AGIEW
Sbjct: 15 PLFALCFVAKTAVGFIAPSLHVAPSAATPLKWVHQHSIP-RTRCRVAGDTVGFRERRMRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMKPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNAILEFIDSNPPKWQKWKEKANAAGIEW 293
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: D8LTH1_ECTSI (Shikimate Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH1_ECTSI) HSP 1 Score: 364 bits (935), Expect = 1.810e-122 Identity = 175/222 (78.83%), Postives = 203/222 (91.44%), Query Frame = 2
Query: 236 RRSELNMEVEPHILRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEWA 901
R + L+MEVEPH+LRLQAAELGSRL+GTNV+FVGMMGTGKSTVARALADVMGRYIFLDTD+IIEELLG SV EVFA DGEE FRSVESQVLDQVHSYVK CVATGGGIV++ KNWG++ +GMVVWLDMEPKDI R+ + PE++AKRPLL+G++P+ +LE ++E R+PQYAQADV V+LKPEDGVDD+T+NVVNTILEFI+SNPPKWQ+WKEKA AGIEWA
Sbjct: 3 RSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWA 224
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A835ZK89_9STRA (Shikimate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK89_9STRA) HSP 1 Score: 244 bits (622), Expect = 4.160e-75 Identity = 120/214 (56.07%), Postives = 162/214 (75.70%), Query Frame = 2
Query: 275 LRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQA------DVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
+RLQ AELGS+L+GTNVYFVGMMGTGK++VAR LAD MGRY F+DTD+IIE+L+ V++VF GEE FR +E++VL+++HSYVK VATGGGIV +K+NWG+L +G+VVWLDM DI+ R+ E+++KR LL G + A+L+AI + R+ Y QA DVRV + P+D VD V + V+ + +FI+SNPPKWQQWK+ A+ +GI W
Sbjct: 18 IRLQTAELGSQLRGTNVYFVGMMGTGKTSVARNLADRMGRYTFMDTDAIIEQLMQAPVAKVFEEQGEEEFRDIEARVLNELHSYVKLVVATGGGIVKEKRNWGKLQTGLVVWLDMAIDDIVKRLSSNEEEVSKRSLLQGGDVAAKLQAIYDERKAMYEQASTSSSADVRVYVSPDDSVDAVVLSSVSELQKFIDSNPPKWQQWKDSAKASGINW 231
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A6U3Q8M5_9STRA (Shikimate kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8M5_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.800e-58 Identity = 100/202 (49.50%), Postives = 142/202 (70.30%), Query Frame = 2
Query: 296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPED-GVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
LG RL+G+N+YFVGMMG+GKS V A+A MG Y FLDTD+IIE + +++E+FA +GE+ FR +ESQVLD VH++V+ V+TGGGIV + NW +L SG+V+W+D+ P I RI ++ + RPLL +NP LE ++E R+P+Y+QADVR+E+ E ++DV VV + FI+ NPP W+ K KAQ G++W
Sbjct: 96 LGPRLQGSNLYFVGMMGSGKSAVGDAVARRMGSYNFLDTDTIIESVTNATITEIFAQEGEDTFRDIESQVLDSVHAHVRCVVSTGGGIVKKLSNWAKLQSGVVIWIDVPPSVIYNRIKDKDD----RPLLQNDNPLETLEKLLEERKPRYSQADVRIEVNDESMSIEDVASKVVQDLHNFIDENPPAWKIAKAKAQAEGLDW 293
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A448ZQW6_9STRA (Shikimate kinase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQW6_9STRA) HSP 1 Score: 197 bits (502), Expect = 2.520e-56 Identity = 100/201 (49.75%), Postives = 140/201 (69.65%), Query Frame = 2
Query: 296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
LG RL+G+N+Y VGMMG+GKS+V LA MG Y FLDTD IIE+ +++E+F ++GEE FR VESQVLD VH+YV+ V+TGGG+V + KNWG+L +G+VVWLD+ P+ IL R+ E RPLL ++P L+ ++E R P+Y QAD+RVE+ + D V +V + FI+ NPP W+ K+KAQ+ G++W
Sbjct: 102 LGPRLQGSNLYLVGMMGSGKSSVGDKLARRMGSYKFLDTDEIIEKATKLTINEIFESEGEEGFRDVESQVLDTVHAYVRCVVSTGGGLVCKPKNWGKLQTGIVVWLDVAPEVILKRV----EGNEDRPLLKTKDPLQTLKDLLEERTPKYNQADLRVEITEDMDEDAVASRIVLDLHNFIDDNPPAWKLAKQKAQEEGLDW 298
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A1Z5KE71_FISSO (Shikimate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE71_FISSO) HSP 1 Score: 196 bits (498), Expect = 4.740e-56 Identity = 95/201 (47.26%), Postives = 137/201 (68.16%), Query Frame = 2
Query: 296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
L RL G N+YF+GMMG+GK++V A+A MG Y FLDTD+IIE+ ++ E+F +GEE FR VE+Q+LD VH YV+ ++TGGGIVT+ +NW +L +G+V+WLD+EP+ I+ RI Q RPLL E+P +L+A++E R+P+Y AD+RV++ E V V+ + FI+ NPP W+ K KAQ G++W
Sbjct: 78 LSPRLNGANLYFIGMMGSGKTSVGEAVARRMGSYTFLDTDAIIEKATKMTIPEIFEAEGEEGFRQVEAQILDSVHPYVRCVISTGGGIVTRMENWSKLQTGLVIWLDVEPEVIIKRI-----QGTDRPLLQTEDPLKKLKALLEERKPKYKNADIRVKVTEEMDTAAVADQVIYDLHHFIDDNPPAWKLAKAKAQAEGLDW 273
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A7S2U848_9STRA (Shikimate kinase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U848_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.820e-54 Identity = 92/201 (45.77%), Postives = 134/201 (66.67%), Query Frame = 2
Query: 296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
L RL+GTN+YF+GMMG+GKS V +A MG Y FLDTD IIE+ S+ +F +GEE FRS+E+QVLD VH+YV+ ++TGGG V + NW + +G+V+WLD++P +++R+ Q RPLL ENP LE ++E R +Y+QAD+++++ PE + V V+ + FI+ NPP W+Q K KAQ G++W
Sbjct: 98 LAPRLQGTNIYFIGMMGSGKSAVGDVVARRMGSYNFLDTDEIIEKATSMSIPSIFEAEGEEGFRSIEAQVLDSVHAYVRCVISTGGGAVCRLSNWSKFQTGIVIWLDVDPDTLISRM-----QGTDRPLLQTENPLETLETLLEERTSRYSQADIQLKITPEMDANAVAEMVIKELHFFIDENPPAWKQAKAKAQAEGLDW 293
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A7S1Z366_TRICV (Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z366_TRICV) HSP 1 Score: 193 bits (490), Expect = 2.690e-54 Identity = 99/215 (46.05%), Postives = 144/215 (66.98%), Query Frame = 2
Query: 254 MEVEPHILRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
M+++P A LG RL+G+N+YF+GMMG+GKS V +A MG Y FLDTDSIIE+ G ++ E+F +GEE FR VE Q+LD VH+YV+ V+TGGGIV + +NW +L +G+VVWLD++P+ I+ RI E RPLL ++P +L+ ++ R +YAQAD+R+E+ + D V V+ + FI+ NPP W++ K KAQ G++W
Sbjct: 115 MKIDP------ARLLGPRLQGSNLYFIGMMGSGKSAVGDIVARRMGTYNFLDTDSIIEKATGMTIPEIFEAEGEEGFRQVEGQILDSVHAYVRCVVSTGGGIVCRLQNWAKLQTGLVVWLDVDPEVIIKRI----EGDENRPLLQTDDPLKKLKDLLGEREERYAQADLRIEVTEDMDEDAVANMVIKELHYFIDENPPAWKKAKAKAQADGLDW 319
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: A0A7R9ZGS2_9STRA (Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGS2_9STRA) HSP 1 Score: 192 bits (487), Expect = 3.590e-54 Identity = 98/215 (45.58%), Postives = 143/215 (66.51%), Query Frame = 2
Query: 254 MEVEPHILRLQAAELGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
M+++P A LG RL+G+N+YFVGMMG+GKS V +A MG Y FLDTD IIE+ S+ E+F +GEE FR E+QVLD VH+YV+ ++TGGG+V + NW +L +G+V+WLD++P+ I+ RI E RPLL ++P +L+ ++E RR +Y+QADVR+E+ + + V VV + FI+ NPP W++ K KAQ G++W
Sbjct: 90 MKIDP------ARLLGPRLQGSNLYFVGMMGSGKSAVGDVVARRMGTYNFLDTDEIIEKATAMSIPEIFDAEGEEGFREAEAQVLDSVHAYVRCVISTGGGLVCRMGNWSKLQTGVVIWLDVDPELIIKRI----EGDTNRPLLQADDPLQKLKDLLEERREKYSQADVRIEVTEDMDENAVADLVVKELHNFIDENPPAWKKAKAKAQAEGLDW 294
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Match: B7GAC8_PHATC (Shikimate kinase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAC8_PHATC) HSP 1 Score: 190 bits (482), Expect = 1.170e-53 Identity = 94/201 (46.77%), Postives = 133/201 (66.17%), Query Frame = 2
Query: 296 LGSRLKGTNVYFVGMMGTGKSTVARALADVMGRYIFLDTDSIIEELLGTSVSEVFATDGEEAFRSVESQVLDQVHSYVKTCVATGGGIVTQKKNWGRLHSGMVVWLDMEPKDILARIGEQPEQMAKRPLLSGENPEAQLEAIMENRRPQYAQADVRVELKPEDGVDDVTFNVVNTILEFIESNPPKWQQWKEKAQQAGIEW 898
LG RL G+NVYFVG+MG+GKS V LA MG Y FLDTD IIE G ++ E+F +GEE FR+VE+QVLD VH YV+ ++TGGGIV + +NW +L +G+VVWLD EP+ I+ RI + RPLL +NP +L+ ++ R +Y+QAD+R+++ + + V + + FI+ NPP W+ K KAQ G++W
Sbjct: 80 LGPRLNGSNVYFVGIMGSGKSAVGDILARRMGTYNFLDTDEIIERATGMTIPEIFKAEGEEGFRTVEAQVLDSVHPYVRCIISTGGGIVIKLENWSKLQTGLVVWLDCEPEVIMRRI-----EGTDRPLLQTDNPLQKLKDLLAEREDKYSQADIRIKVTEDMDTEHVADLAIRELHNFIDENPPAWKLAKSKAQAEGLDW 275 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig826.19664.1 >prot_F-serratus_M_contig826.19664.1 ID=prot_F-serratus_M_contig826.19664.1|Name=mRNA_F-serratus_M_contig826.19664.1|organism=Fucus serratus male|type=polypeptide|length=288bp MGKVIDSRTVKYAFPFLVLVFAVKTTIGFLVMSPMSPNALWLSSYQGPLRback to top mRNA from alignment at F-serratus_M_contig826:170956..174339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig826.19664.1 ID=mRNA_F-serratus_M_contig826.19664.1|Name=mRNA_F-serratus_M_contig826.19664.1|organism=Fucus serratus male|type=mRNA|length=3384bp|location=Sequence derived from alignment at F-serratus_M_contig826:170956..174339+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig826:170956..174339+ >mRNA_F-serratus_M_contig826.19664.1 ID=mRNA_F-serratus_M_contig826.19664.1|Name=mRNA_F-serratus_M_contig826.19664.1|organism=Fucus serratus male|type=CDS|length=1728bp|location=Sequence derived from alignment at F-serratus_M_contig826:170956..174339+ (Fucus serratus male)back to top |