mRNA_F-serratus_M_contig826.19658.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5KGJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ7_9PHAE) HSP 1 Score: 131 bits (329), Expect = 6.640e-36 Identity = 60/69 (86.96%), Postives = 62/69 (89.86%), Query Frame = -1
Query: 147 ALRNITISTQYVSMRLRFAVRRLPQPLKSRSICAAEAWFPNTCWATGARVGKWFLPLVAHQPSTSFGCS 353
AL NITIS YVS+RLRF V R+PQPLKSRSICAAEAWFPNTCWATGARVG WFLPLVAHQPSTS GCS
Sbjct: 14 ALGNITISNPYVSVRLRFEVMRVPQPLKSRSICAAEAWFPNTCWATGARVGNWFLPLVAHQPSTSLGCS 82
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 125 bits (314), Expect = 8.270e-33 Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 1
Query: 97 VEGDIVRYQAHFMTPDELHPKDVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASP 372
V +I RY + ++T +EL +++L WW G+ FP LAPVAQQVFGNQA AAQ+ERDFSGC NLLT NRSRMDTYWVEMVMFL A + P
Sbjct: 8 VSQEIERYHSLYITAEELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIP 99
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 122 bits (307), Expect = 7.320e-31 Identity = 61/111 (54.95%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 109 IVRYQAHFMTPDELHPKDVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASPRTVPSP*SLRRISARVFPGVFRG 441
I R+QA +MT +EL ++VL WW G+ FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL K P P + P F G
Sbjct: 87 IDRFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG 197
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 127 bits (319), Expect = 4.290e-30 Identity = 68/144 (47.22%), Postives = 83/144 (57.64%), Query Frame = 1
Query: 10 FSSFGRRAAVGGDGSSGVGGAERDPVAEAVEGDIVRYQAHFMTPDELHPKDVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASPRTVPSP*SLRRISARVFPGVFRG 441
F+S R G G G +E + + V ++ R+QA +MT +EL ++VL WW G+ FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL K P P + P F G
Sbjct: 452 FASLARNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG 595
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 122 bits (307), Expect = 5.820e-30 Identity = 69/147 (46.94%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 4 SVFSSFGRRAAVGGDGSSGVGGAERDPVAEAVEGDIVRYQAHFMTPDELHPKDVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASPRTVPSP*SLRRISARVFPGVFRGK 444
S FS FGR A +E + E V G++ Y++ F+ DEL ++VL WW GKN FP LAPVAQQVFGNQA+ +Q+ERDFSG G LL NRSRMDTYWVE+VMFL A P P + P F G+
Sbjct: 139 SRFSLFGRGDARSSTDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHGR 285
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 125 bits (314), Expect = 2.980e-29 Identity = 68/148 (45.95%), Postives = 88/148 (59.46%), Query Frame = 1
Query: 10 FSSFGRRAAVGGDGSSGVGGAERDPVAEAVE----GDIVRYQAHFMTPDELHPKDVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASPRTVPSP*SLRRISARVFPGVFRG 441
F++FGR VGG E +AVE +I+RY+ FMT ++LHP +VL +WAT G++ FP L VAQQ FG+Q SAA +ERDFSGCG L NRSR++ YWVEMVMFL A K P+ P + + P F+G
Sbjct: 687 FAAFGRS----------VGGVEESKQGDAVEQEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKG 824
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 115 bits (288), Expect = 6.870e-26 Identity = 59/109 (54.13%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 67 GAERDPVAEAVEGDIVRYQAHFMTPDELHPKDVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASP--RTVPS 387
G + D V E V G+I+RY+ FM P +L P DVL +W GK FP+L VAQQ FG+QASAAQIERDFS CG T NRSR + YW+EMVM LK + P + +PS
Sbjct: 460 GGDVDFVEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPS 568
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 6.420e-21 Identity = 48/81 (59.26%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 199 FPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASPRTVPSP*SLRRISARVFPGVFRG 441
FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL K P P + P F G
Sbjct: 2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG 82
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 100 bits (250), Expect = 6.890e-21 Identity = 54/116 (46.55%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 94 AVEGDIVRYQAHFMTPDELHPKDVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASPRTVPSP*SLRRISARVFPGVFRG 441
+V G+I R +A M +L P+DVL +W G++ FP L VAQQ FG+QA AAQIERDFS G L +NR+R+D YWVEMV+FLKA + P P + P F+G
Sbjct: 364 SVAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKG 479
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.280e-20 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 160 DVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKATSKASPR-TVPS--P*SLRRISARVFPG 429
+VL +W GK+ FP+L VAQQ FGNQASAA +ERDFSGCG + NRSR+D YWVEMVMFLKA +S R +P P +R+ F G
Sbjct: 389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRINIPQIDPKDIRKCLPAKFEG 481 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig826.19658.1 >prot_F-serratus_M_contig826.19658.1 ID=prot_F-serratus_M_contig826.19658.1|Name=mRNA_F-serratus_M_contig826.19658.1|organism=Fucus serratus male|type=polypeptide|length=87bp MTPDELHPKDVLGWWATKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCback to top mRNA from alignment at F-serratus_M_contig826:89462..90467- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig826.19658.1 ID=mRNA_F-serratus_M_contig826.19658.1|Name=mRNA_F-serratus_M_contig826.19658.1|organism=Fucus serratus male|type=mRNA|length=1006bp|location=Sequence derived from alignment at F-serratus_M_contig826:89462..90467- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig826:89462..90467- >mRNA_F-serratus_M_contig826.19658.1 ID=mRNA_F-serratus_M_contig826.19658.1|Name=mRNA_F-serratus_M_contig826.19658.1|organism=Fucus serratus male|type=CDS|length=522bp|location=Sequence derived from alignment at F-serratus_M_contig826:89462..90467- (Fucus serratus male)back to top |