mRNA_F-serratus_M_contig8.19328.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: A0A6H5JIK9_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK9_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 1.490e-129 Identity = 200/306 (65.36%), Postives = 245/306 (80.07%), Query Frame = 3
Query: 264 IGLKSASTMVYGSTSAVKSKILQLAAVTDRGGMAN---KGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGR---------RGEETTIVIAQEDDVNG---SLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTGQVTKQVLGNVPVTKQTVVYIDDNLRVMQDEAGELFIYSR 1136
+ +KS M S + VKSK+LQLAA DRGGMAN +GVS+AYLG++DDMR LV++LAQ +PV KPL++ +L+G+WEL+YTTVELFRASPFFQMVEAGY+DP+KS+LFFKLHQLQTGSWG S+IGR+TQ +DL D PS EGR+ T G + V+ D++G SLESEVDLI+LPLTS+P++GFWKLLPTFGGCI+T+A CSL GD NE+V+L+VESTKLKAVEDVPLLP+AGP FEG EFPTG+VTK+V+GNVPVTKQTVVYIDD LRVM+D+AGEL+IY+R
Sbjct: 1 MAMKSPVRMASDSVAEVKSKVLQLAASMDRGGMANPGNRGVSHAYLGTKDDMRLLVESLAQLDPVNKPLTATELSGRWELVYTTVELFRASPFFQMVEAGYDDPEKSNLFFKLHQLQTGSWGASKIGRVTQTLDLIDSVPPSI--EGRDATATPAAEAEAAAAGAVEGSDKAGVVEDNTDMSGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATKAKCSLAGDNNEVVQLIVESTKLKAVEDVPLLPIAGPLFEGMEFPTGEVTKKVMGNVPVTKQTVVYIDDTLRVMEDKAGELYIYAR 304
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: A0A0G4EA07_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA07_VITBC) HSP 1 Score: 188 bits (478), Expect = 6.840e-51 Identity = 106/291 (36.43%), Postives = 166/291 (57.04%), Query Frame = 3
Query: 300 STSAVKSKILQLAAVTDRGGMANKGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNEIVELVVESTKLKAVEDVPLLPVAGPFF-EGREFPTGQVTKQVLGNVPVTKQTVVYIDDNLRVMQDEAGELFIYSRFDAPTDRNERG 1169
ST+ +K ++LQLAA TDRG A K ++ + +VD+L+ P + S LNG W L+Y + +LFR+SPFF ++A Y+D K+ LFFKLH+LQT SWG S I ++ Q T++ + + +G L S+ ++ +LP T +P++G+WKLLPTFGG + + A+ S+ GD N+ ++L V+ TK+KA ED+PL+P+ G F E V K++ G+VP + T V++D +R+ +D GE+F+Y R D D ++ G
Sbjct: 56 STADLKMRLLQLAASTDRGQQATKR-------QKEQISNVVDDLSSRGPFD--CSPGMLNGSWVLVYASAQLFRSSPFFLSIQASYDDSKKASLFFKLHELQTRSWGFSEIAQVGQ-------------------------------TLLFPEANSTDGRLRSDFNIKVLPSTVVPLVGWWKLLPTFGGNVRSIANASISGDANQHLDLTVDLTKVKASEDLPLMPLLGQFLAEQTGIRVSNVWKRLRGSVPTARVTHVFVDSGMRIAKDSQGEVFVYVR-DVDDDFDDLG 305
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: A0A7S2Q3B1_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q3B1_9DINO) HSP 1 Score: 162 bits (411), Expect = 1.310e-42 Identity = 97/274 (35.40%), Postives = 148/274 (54.01%), Query Frame = 3
Query: 330 QLAAVTDRGGMANKGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVE--LFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTGQVTKQVL---GNVPVTKQTVVYIDDNLRVMQDEAGELFIYSR 1136
+LAA DRG N + Y + R L++ + P P S A+++G+WEL+++TV+ +FR+SPFF V+ D+SDLFFKLH+LQ SWG+S++GR+ Q I+ T+ G L SE D LL LT++PIIGFWKLLPTFGGC+ T + L GD+ +++ V+ T+ + V +P P+AG G+ P + + + G PV + Y+D+++R++ D GELF+Y+R
Sbjct: 1 RLAAALDRGQAYNPTSGDHYAERMETARSLIEEIISEAP-PPPTSLAEIDGEWELVFSTVKHGIFRSSPFFLAVQEALGGRDQSDLFFKLHELQVMSWGISKVGRVAQYINSTE------------------------------------GKLYSEFDTSLLSLTTIPIIGFWKLLPTFGGCVVTASDVGLNGDR---LDMEVQWTEAREVPGLP--PLAGAIL-GQRVPVNSIWQALPWNEGRRPVCSVALRYLDEDMRIVADNDGELFVYTR 231
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: A2C2Q8_PROM1 (PAP_fibrillin domain-containing protein n=6 Tax=Prochlorococcus TaxID=1218 RepID=A2C2Q8_PROM1) HSP 1 Score: 161 bits (408), Expect = 5.060e-42 Identity = 96/281 (34.16%), Postives = 152/281 (54.09%), Query Frame = 3
Query: 312 VKSKILQLAAVTDRGGMANKGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTGQVTKQVLGNV--PVTKQTVVYIDDNLRVMQDEAGELFIYSRFDAP 1148
+K+ I Q+AA TDRG N ++ Y ++M++LV++L +P+ ++ + + G+WEL+Y++VELFR+SPFF +E ND KSDLFFKLH LQ GS+G+S +GR+ Q ++ T G + S D + LT++PI+G++KLLPTFGG + T A+ KN I+ + +E TK+ V+ + +P R +P V K + N P + +V+Y+D +LR+++D G LF+Y R P
Sbjct: 7 LKALIYQVAAATDRGQRMNAMIAPMYQNKLEEMKKLVEDL---QPLSDEITQSSIEGEWELIYSSVELFRSSPFFLAIEKALNDKSKSDLFFKLHLLQVGSFGLSTVGRVGQYLNFT------------------------------------KGEMISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLANKLQL--KNNILSMELEKTKVSEVDGLGKIPFVNSILMERWYPVKNVWKLLPWNKENPNCEISVIYVDKDLRIIRDMHGALFVYIRPSIP 246
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: A0A7S4FT55_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FT55_9EUGL) HSP 1 Score: 167 bits (422), Expect = 5.180e-42 Identity = 106/278 (38.13%), Postives = 151/278 (54.32%), Query Frame = 3
Query: 312 VKSKILQLAAVTDRGGMANKGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRA-HCSLKGDKNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTGQVTKQVLGNV--PVTKQTVVYIDDNLRVMQDEAGELFIYSR 1136
+K KIL +AA+TDRG K VS+A D M+ LV L + P +S ++ GKWEL+Y++VELFR+SPFF +E +NDP KSDLFFKLH LQ GSWGVS IG ++Q ID +ET +ES+ D + LT +PI+G++KLLPTFGG + T A + L+GD ++ + +E T++ VP +P + P V + + N P ++Y+DD+ RV++D+ G LFIY R
Sbjct: 201 LKRKILHVAALTDRGQRHLKIVSDAMKDREDMMKDLVKELVDNHPCY--ISEQKVAGKWELVYSSVELFRSSPFFLAIEQAFNDPSKSDLFFKLHLLQVGSWGVSTIGEVSQRIDFE-----------KET-------------------------MESDFDTTIFGLTVIPIVGWFKLLPTFGGRVVTEAKNLKLEGD---MLSMELERTQVINAPGVPRIPFVAGAVMDKWVPVNAVWQLLPWNKEKPTCSVRLLYVDDDFRVVEDQTGGLFIYMR 437
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: A0A061RCL2_9CHLO (Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCL2_9CHLO) HSP 1 Score: 162 bits (411), Expect = 1.110e-41 Identity = 98/281 (34.88%), Postives = 145/281 (51.60%), Query Frame = 3
Query: 312 VKSKILQLAAVTDRGGMANKGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNEIVELVVESTKLKAVEDVP---LLPVAGPFFEGREFPTGQVTKQVL---GNVPVTKQTVVYIDDNLRVMQDEAGELFIYSR 1136
+K +ILQ +A DRG + ++ VS+AY G R + +L+ L S E + + G+WEL+Y+T +LFR+SPFF ++A + D +KS LFFKLH LQ SWG S +GR+ Q ID + SE D I+ LT +PI G++KLLPTFGG + + A + +++ ++ T+++A +P LPV G +FP +V K + G P TV Y+DD R+M+D GELF+YSR
Sbjct: 68 IKLQILQHSATLDRGQLHDRLVSDAYEGKRQKILELIQELC-SRKTESRFEKSMIAGEWELVYSTCQLFRSSPFFMAIQAAFADKEKSALFFKLHDLQVKSWGASTVGRVAQNIDFE------------------------------------SNQFRSEFDTIIFALTVVPIFGWFKLLPTFGGRVISYAEDLEFDIETGRLDMELKRTRVEAAPGIPNIKKLPVLGRALMDNDFPVSRVWKSLPWNGGRAPKCSVTVKYVDDTFRIMEDPDGELFVYSR 311
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: W7T369_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T369_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.840e-41 Identity = 110/317 (34.70%), Postives = 170/317 (53.63%), Query Frame = 3
Query: 201 SAFLTSASAGGRLTRYQASSNIGLKSASTMVYGSTSAVKSKILQLAAVTDRGGMANKGVSNA--YLGSRDDMRQLVDNL-AQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNE----IVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTGQVTKQV----LGNVPVTKQTVVYIDDNLRVMQDEAGE 1118
S F++S GR T + ++ L S +T S +++K K+ QLAA+TDRG + + VS+ Y R+ M L++ L A+ ++ +S L G+WEL+Y+T +LFR+SPFFQ +E Y DP KS+LFFKLH+LQT SWG S+IGR+ Q IDL AQ +L S D +L PLT++P+IG++KLLPTFGG + + A + ++ +E V T K + + +P+ G + E ++FPT + + G P VVY+D++ R++++ GE
Sbjct: 54 SLFISSTVHNGRST----ARDLRLFSTATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQ------------------------------AQ------TLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGE 330
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: Q31AK5_PROM9 (Gram-negative pili assembly chaperone-like protein n=38 Tax=Prochlorococcus TaxID=1218 RepID=Q31AK5_PROM9) HSP 1 Score: 159 bits (402), Expect = 3.920e-41 Identity = 99/277 (35.74%), Postives = 147/277 (53.07%), Query Frame = 3
Query: 312 VKSKILQLAAVTDRGGMANKGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTGQVTKQVLGNV--PVTKQTVVYIDDNLRVMQDEAGELFIYSR 1136
+KS I ++AAVTDRG NK +S Y ++M +L+D+L + +S L+G+WEL+++ VELFR+SPFF +E ND KS+LFFKLHQLQ GS+G+S IGRI Q ID N S D + LT++PI+G++KLLPTFGG + T A + KN +++ ++ TK+ V+ + +P R +P V ++ N P ++VY+D+ +R+MQD G +FIY R
Sbjct: 7 IKSNIYKIAAVTDRGQRLNKLISPMYEEKNNEMVELIDDLKN---LSFEISEKSLSGEWELIFSNVELFRSSPFFLAIENALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFD------------------------------------NKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVL--KNNSLDMNLQKTKVSKVDGLNKIPFFSELLMDRWYPVKDVWNKLPWNKESPNCHVSIVYLDEEMRIMQDMYGSIFIYIR 242
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: B9P2A1_PROMR (Putative Gram-negative pili assembly chaperone n=1 Tax=Prochlorococcus marinus str. MIT 9202 TaxID=93058 RepID=B9P2A1_PROMR) HSP 1 Score: 158 bits (400), Expect = 7.530e-41 Identity = 98/277 (35.38%), Postives = 148/277 (53.43%), Query Frame = 3
Query: 312 VKSKILQLAAVTDRGGMANKGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTGQVTKQVLGNV--PVTKQTVVYIDDNLRVMQDEAGELFIYSR 1136
+KS I +++AVTDRG NK +S Y ++M +L++ L + +S L+G+WEL+++ VELFR+SPFF +E ND KS+LFFKLHQLQ GS+G+S IGRI Q ID S D + LT++PI+G++KLLPTFGG + T A + KN ++++ ++ TK+ V+ + +P R FP +V ++ N P + TV+Y+D+ +R+MQD G +FIY R
Sbjct: 7 IKSNIYKISAVTDRGQRLNKLISPIYEEKGNEMDELIEAL---KDFSFEISEKSLSGEWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFDKK------------------------------------EFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVL--KNNVLDMNLQKTKVSKVDGLNKIPFFSELLMERWFPVKEVWNKLPWNKESPNCQVTVIYLDEEMRIMQDMYGSIFIYIR 242
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Match: UPI001ADA2238 (pilus assembly protein n=1 Tax=Prochlorococcus marinus TaxID=1219 RepID=UPI001ADA2238) HSP 1 Score: 158 bits (400), Expect = 7.530e-41 Identity = 97/277 (35.02%), Postives = 154/277 (55.60%), Query Frame = 3
Query: 312 VKSKILQLAAVTDRGGMANKGVSNAYLGSRDDMRQLVDNLAQSEPVEKPLSSAQLNGKWELLYTTVELFRASPFFQMVEAGYNDPDKSDLFFKLHQLQTGSWGVSRIGRITQVIDLTDPAGPSSGPEGRETTVDVQGRRGEETTIVIAQEDDVNGSLESEVDLILLPLTSLPIIGFWKLLPTFGGCISTRAHCSLKGDKNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTGQVTKQVLGNV--PVTKQTVVYIDDNLRVMQDEAGELFIYSR 1136
+K+ I ++AAVTDRG NK V+ Y +++ L+++L + +S L+G+WEL+++ VELFR+SPFF +E ND KS+LFFKLHQLQ GS+G+S IGRI Q ID + +E T S D I+ LT++PI+G++KLLPTFGG + T A+ + KN ++++ ++ TK+ V+ + +P R +P +V ++ N P + +++Y+D+ +R+MQD G +FIY R
Sbjct: 7 IKTNIYKIAAVTDRGQRLNKLVAPIYEEKANEIEDLIESL---KSFNFEISEQSLSGEWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDF----------DKKEFT--------------------------STFDTIIFGLTTIPILGWFKLLPTFGGRVITLANDLVL--KNNLLDMNLQKTKVSKVDGLNKIPFFSKLLMDRWYPVKEVWNKLPWNKESPNCQVSIIYLDEEMRIMQDIYGSIFIYIR 242 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8.19328.1 >prot_F-serratus_M_contig8.19328.1 ID=prot_F-serratus_M_contig8.19328.1|Name=mRNA_F-serratus_M_contig8.19328.1|organism=Fucus serratus male|type=polypeptide|length=350bp MVPIARLSVYHVVVGIVLTCLNHASAFLTSASAGGRLTRYQASSNIGLKSback to top mRNA from alignment at F-serratus_M_contig8:870498..875890+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8.19328.1 ID=mRNA_F-serratus_M_contig8.19328.1|Name=mRNA_F-serratus_M_contig8.19328.1|organism=Fucus serratus male|type=mRNA|length=5393bp|location=Sequence derived from alignment at F-serratus_M_contig8:870498..875890+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8:870498..875890+ >mRNA_F-serratus_M_contig8.19328.1 ID=mRNA_F-serratus_M_contig8.19328.1|Name=mRNA_F-serratus_M_contig8.19328.1|organism=Fucus serratus male|type=CDS|length=2100bp|location=Sequence derived from alignment at F-serratus_M_contig8:870498..875890+ (Fucus serratus male)back to top |