mRNA_F-serratus_M_contig78.19039.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig78.19039.1
Unique NamemRNA_F-serratus_M_contig78.19039.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: D8LP22_ECTSI (CDGSH iron sulfur domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP22_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.820e-42
Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 3
Query:   63 MKISGTITALATLGCTDAFVFPASGTAVRQQTARSAERMNE-KVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            MK +G I AL TLGC +AFV PA  T VR +TAR+AE++N  + +LDKPKVVTM++V+ G KKVYCRCWKSGTFPLCDG+H KHNEATGDNVGPLIVSGPK
Sbjct:    1 MKTAGAI-ALVTLGCANAFVIPAGRTVVRAETARAAEKINTIEFELDKPKVVTMDSVDAGGKKVYCRCWKSGTFPLCDGAHVKHNEATGDNVGPLIVSGPK 100          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A7S2UEE3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEE3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.770e-32
Identity = 65/100 (65.00%), Postives = 71/100 (71.00%), Query Frame = 3
Query:   63 MKISGTITALATLGCTDAFVFPASGTAVRQQTARSAERMNEKVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            MK+     AL T   T AF F A   +    T   AER+N +VDLD PKV TME +EPG KKVYCRCW+SGTFPLCDGSH KHNEATGDNVGPLIVS PK
Sbjct:    1 MKVIAVAIALLTSQVT-AFTFVAKSHSA--STKLFAERINTQVDLDSPKVATMEKLEPGTKKVYCRCWQSGTFPLCDGSHMKHNEATGDNVGPLIVSVPK 97          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A4D9DCC5_9STRA (ZnF_CDGSH domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCC5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.430e-29
Identity = 53/84 (63.10%), Postives = 66/84 (78.57%), Query Frame = 3
Query:  111 DAFVFPASGTAVRQQTARSAERMNEKVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            DAF  P+ G    +++   A ++N KV+L+ PKVVTM  + PGEKKV+CRCW+SGTFPLCDG+H KHNEATGDNVGPLI+S PK
Sbjct:   18 DAFFKPSVG----RRSLELASKINTKVELENPKVVTMTQLAPGEKKVFCRCWQSGTFPLCDGAHMKHNEATGDNVGPLIISNPK 97          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A7S0H1H1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H1H1_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 2.520e-28
Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 3
Query:  168 AERMNEKVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            AE++NE VDL+ PKVVTME ++ GEKKVYCRCWKSGTFPLCDG+HAK N+ +GDNVGPLIVSGPK
Sbjct:   80 AEKINELVDLESPKVVTMEELKVGEKKVYCRCWKSGTFPLCDGTHAKWNKQSGDNVGPLIVSGPK 144          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A7S3JTK3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTK3_9STRA)

HSP 1 Score: 113 bits (283), Expect = 5.810e-28
Identity = 53/85 (62.35%), Postives = 62/85 (72.94%), Query Frame = 3
Query:  108 TDAFVFPASGTAVRQQTARSAERMNEKVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            T AF    S  +     A +  ++N  +DLD  KVVTM+ +E G+KKVYCRCW SGTFPLCDG+HAKHNEATGDNVGPLIVS PK
Sbjct:   30 TSAFTRQVSIRSFASLKAENPNKINTMIDLDSAKVVTMDELEAGKKKVYCRCWLSGTFPLCDGTHAKHNEATGDNVGPLIVSSPK 114          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A7S2TZX7_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TZX7_9EUKA)

HSP 1 Score: 113 bits (282), Expect = 2.240e-27
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 3
Query:  171 ERMNEKVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            ER+N +VDL+ PKVVTME +  GEKKV+CRCWKSGTFPLCDG+HAK N+ TGDNVGPLIVSGPK
Sbjct:   85 ERINTEVDLESPKVVTMEDLGKGEKKVFCRCWKSGTFPLCDGTHAKWNKETGDNVGPLIVSGPK 148          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A7S1GHV5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GHV5_CYCTE)

HSP 1 Score: 111 bits (277), Expect = 5.500e-27
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 3
Query:  174 RMNEKVDLDKPKVVTMETV-EPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            R+NE++DL+  KVVTMET+ EPG KKVYCRCW+SGTFPLCDG+HAKHNEATGDNVGPLIVS PK
Sbjct:   57 RINEQIDLESAKVVTMETLAEPG-KKVYCRCWQSGTFPLCDGTHAKHNEATGDNVGPLIVSVPK 119          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A812JQ04_9DINO (Cisd1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JQ04_9DINO)

HSP 1 Score: 110 bits (274), Expect = 1.620e-26
Identity = 51/71 (71.83%), Postives = 60/71 (84.51%), Query Frame = 3
Query:  153 QTARSAE-RMNEKVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            +TAR AE ++N K+D + PKVVT E ++ G+KKVYCRCW SGTFPLCDG+HAKHNEATGDNVGPLIVS  K
Sbjct:   52 RTARKAEGKINNKIDPEVPKVVTKEDLKAGDKKVYCRCWLSGTFPLCDGTHAKHNEATGDNVGPLIVSVKK 122          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A7R9W3H1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3H1_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.820e-26
Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 3
Query:  174 RMNEKVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            ++N K+DLD PKVV  E +EPG+K VYCRCW SGTFPLCDG+HAKHN+ATGDNVGPLIVS  K
Sbjct:   64 KINGKIDLDSPKVVNQEKLEPGKKGVYCRCWLSGTFPLCDGTHAKHNDATGDNVGPLIVSAAK 126          
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Match: A0A835ZBW8_9STRA (CDGSH iron sulfur domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.000e-26
Identity = 57/100 (57.00%), Postives = 70/100 (70.00%), Query Frame = 3
Query:   63 MKISGTITALATLGCTDAFVFPASGTAVRQQTARSAERMNEKVDLDKPKVVTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK 362
            M+    +  LA++    AFV P+S  ++R  T  S ER+N K+DL+ PKV TMET+  G KKVYCRCWKS TFPLC+G+H KHNE  GDNVGPLIVS  K
Sbjct:    1 MQTVFAVALLASVASVPAFV-PSS--SIRAPTHLS-ERINNKIDLESPKVATMETLPAGGKKVYCRCWKSATFPLCNGAHVKHNEEVGDNVGPLIVSVEK 96          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig78.19039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP22_ECTSI1.820e-4272.28CDGSH iron sulfur domain-containing protein n=1 Ta... [more]
A0A7S2UEE3_9STRA1.770e-3265.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A4D9DCC5_9STRA2.430e-2963.10ZnF_CDGSH domain-containing protein n=1 Tax=Nannoc... [more]
A0A7S0H1H1_9EUKA2.520e-2878.46Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S3JTK3_9STRA5.810e-2862.35Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2TZX7_9EUKA2.240e-2778.13Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S1GHV5_CYCTE5.500e-2781.25Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A812JQ04_9DINO1.620e-2671.83Cisd1 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A7R9W3H1_9STRA1.820e-2674.60Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A835ZBW8_9STRA2.000e-2657.00CDGSH iron sulfur domain-containing protein n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig78contigF-serratus_M_contig78:6879..12345 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.1
Seed ortholog evalue1.1e-33
Seed eggNOG ortholog2880.D8LP22
Hectar predicted targeting categorysignal peptide
GOsGO:0000422,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0006914,GO:0006996,GO:0007005,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0009056,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009894,GO:0009987,GO:0010150,GO:0010259,GO:0010506,GO:0012505,GO:0016020,GO:0016043,GO:0019222,GO:0019867,GO:0022411,GO:0031090,GO:0031323,GO:0031329,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0032501,GO:0032502,GO:0042175,GO:0042592,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046983,GO:0048037,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051536,GO:0051537,GO:0051540,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0061726,GO:0061919,GO:0065007,GO:0065008,GO:0071840,GO:0072593,GO:0090693,GO:0098588,GO:0098771,GO:0098805,GO:0098827,GO:0099402,GO:1903008
EggNOG free text desc.2 iron, 2 sulfur cluster binding
EggNOG OGsKOG3461@1,KOG3461@2759
Ec32 ortholog descriptionIron sulphur-containing domain, CDGSH-type, subfamily
Ec32 orthologEc-06_006890.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size880
Cds size303
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig78.19039.1prot_F-serratus_M_contig78.19039.1Fucus serratus malepolypeptideF-serratus_M_contig78 7394..12283 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932321.750865-UTR-F-serratus_M_contig78:6878..73931622932321.750865-UTR-F-serratus_M_contig78:6878..7393Fucus serratus maleUTRF-serratus_M_contig78 6879..7393 -
1690964252.4084985-UTR-F-serratus_M_contig78:6878..73931690964252.4084985-UTR-F-serratus_M_contig78:6878..7393Fucus serratus maleUTRF-serratus_M_contig78 6879..7393 -
1622932321.812714-UTR-F-serratus_M_contig78:12283..123451622932321.812714-UTR-F-serratus_M_contig78:12283..12345Fucus serratus maleUTRF-serratus_M_contig78 12284..12345 -
1690964252.4525461-UTR-F-serratus_M_contig78:12283..123451690964252.4525461-UTR-F-serratus_M_contig78:12283..12345Fucus serratus maleUTRF-serratus_M_contig78 12284..12345 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932321.7660027-CDS-F-serratus_M_contig78:7393..74991622932321.7660027-CDS-F-serratus_M_contig78:7393..7499Fucus serratus maleCDSF-serratus_M_contig78 7394..7499 -
1690964252.4203753-CDS-F-serratus_M_contig78:7393..74991690964252.4203753-CDS-F-serratus_M_contig78:7393..7499Fucus serratus maleCDSF-serratus_M_contig78 7394..7499 -
1622932321.7780447-CDS-F-serratus_M_contig78:7818..78681622932321.7780447-CDS-F-serratus_M_contig78:7818..7868Fucus serratus maleCDSF-serratus_M_contig78 7819..7868 -
1690964252.4297748-CDS-F-serratus_M_contig78:7818..78681690964252.4297748-CDS-F-serratus_M_contig78:7818..7868Fucus serratus maleCDSF-serratus_M_contig78 7819..7868 -
1622932321.7922533-CDS-F-serratus_M_contig78:12136..122831622932321.7922533-CDS-F-serratus_M_contig78:12136..12283Fucus serratus maleCDSF-serratus_M_contig78 12137..12283 -
1690964252.4414215-CDS-F-serratus_M_contig78:12136..122831690964252.4414215-CDS-F-serratus_M_contig78:12136..12283Fucus serratus maleCDSF-serratus_M_contig78 12137..12283 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig78.19039.1

>prot_F-serratus_M_contig78.19039.1 ID=prot_F-serratus_M_contig78.19039.1|Name=mRNA_F-serratus_M_contig78.19039.1|organism=Fucus serratus male|type=polypeptide|length=101bp
MKISGTITALATLGCTDAFVFPASGTAVRQQTARSAERMNEKVDLDKPKV
VTMETVEPGEKKVYCRCWKSGTFPLCDGSHAKHNEATGDNVGPLIVSGPK
*
back to top

mRNA from alignment at F-serratus_M_contig78:6879..12345-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig78.19039.1 ID=mRNA_F-serratus_M_contig78.19039.1|Name=mRNA_F-serratus_M_contig78.19039.1|organism=Fucus serratus male|type=mRNA|length=5467bp|location=Sequence derived from alignment at F-serratus_M_contig78:6879..12345- (Fucus serratus male)
CACAGTTCTAAAAAAACAGGGCTTGTCCACTACAGGTACTGTTCTTCACC CCTCTCCAAAACATGAAAATCTCAGGTACTATCACCGCACTAGCTACCCT CGGCTGTACCGATGCATTTGTTTTTCCGGCGAGTGGGACGGCAGTACGCC AGCAGACCGCGAGAAGTGCTGAACGCATGAATGAGAAGGTGGACCTAGAC AAACCAAAGGTGCGCATGTATCGCGGTCGATATCGTACAGTAACAGGAAC CACACAAGACAAACATGACTGACCTCTAACCCCAGCGGATCAATCTACAT GCATGCTGACTTGGTGGTCATTGGGAGAAAGCTCTGTAGAGACGATTCAT GCAGTGCATAGTGGACTGATGACTGGGATCATCAATATCTCCAAACCCCA AGCTACGTACTTGTGCACGGCCAGGGCTCCGATCCCGTGATGTGGCTAAT CGCGAAATTAATCTCGCGCGCAGCGCGCGCTCCTTTCGCCTAGCGAAAAT CGGGATTCATGACGTTGGGTAAATAGTTCGAATCTTGACTTCGCAACGTC TATTTTTTTCAGGCTATGCCGCAGGGGACGGTTGTGAACATACCGGCAGC ACAAATTAATAGTAATATTATAACCCCAGCTCCCTGGTATCCTTCCTCGG CATCGCAAATGAAACTCTATATGGGAATCGAGGGGACCTGTATACCTGGT AATGGACTATTAATAATTAATAGTCGATTCATTATTCATACTGGTATATC ATACCGCTGTAGTATCTCCCCCATTTCATTTCCTGAGAAAATATCAAGAA AATCGGGTGGGAACCTTTCCCCGGGGGCCGTAATGCGGCATTTCCCGTGT GCTTCGTGGGTTAGGTGAACTTGGAGTTATACGCCCTGGCTGCTTTGATT GCTGAGAAGCTCTGCGCAATCACATGACTTTAATATGATATAAGTTTCTG CTCACATTTCGTTAGTTATATAATATATTAACATGATGTAATATACAGTA CCTGGTATGTTTCAAGGTTCGTAATTTGCGGCATTCACTAAAAAATGCCA GGTATCTATAAGTCCAAGTTTTTTTTCGGCAGAACTTATTGGAATCTCGC GTAAACTTTGCCTTTAAATAATGGCCAAAATAAATACTAATGTTCCATAA TTGTACTAAATGATTTAGAGGCAAGAATACGGTTATTTCTCTCATTCAGC GTATTGGTTTCCAACCCGAGGTATCAAGTCTCACCACGTTGTTGGCCAAA CCCGCTTGTGGTCTGCTGATTAGTAGCCCCGCCGCTGTGGCATTGGCGCC CCGAAGGTGTATGTATGGTCATCACATATATCAGACTATGGATCAACCGG GTAAGGTTGCCAATCCTGCTCATGGTCAGCTGAACAGGGAAAATAATATT CCCCTGTCCCCGTGCGTGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAG CCGTCCCGTACCGCGTCAGCCTGCTCATCTCCAGACTCAGGCTGAATCTG GTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGAAGGTGAAGG TGAAGGGTTTATTTTGGGGTTCATCTCACCGTTTTGGCTGATGTCAACGC GAAGAAACGAGTGGTTCAAGGGTTCTCGGATGGCTCTTCCCGTTAACAGG TACCAACCACTCTCCACCCTCGGCGTACGAGGGAAAGTTCCTCAGATCGC GAGAAATGCCTGTACAGCAGTAGTTGGGAAATACTGCGTTCCCTGTGACA TTCTCTTTCGAAGAGACGAAGAAGATAGGCCACTCAGACAGCACGTGCAG TACAAATTAACGTCTTAGTTTATCCATCTATCCCGGGCTGGGGATGTCTT CTTTCTCCTTCCCCCCCGCCTGTCCCTCCCTCTTTTTCTCTTCTCCCCCT TCCCCCAACCATAGCCACTTCCAATGCTTTCAACATGCCCACTTCATACT ACTATAATAGTGTGTGTAGGAACAGAGAGGTGCACATTAATTGGTATATG GTAATGCAAAGGCAGCACCCGTTACTGGAACTACCTTGAGGACTATTGGC TCTGTGCCGGTGGACTCTCGGCACTGAACGCCACCGGTACGCAATTGCAG GGCCCGATAAACTCGGGACTGACCCGATGGCGTATGGCGGTTTAAATAAA TAAATGGACACCGCCCGCCGCGGATAGCGGGAGGAATTCCGAGTACCATA TTCGGCTTGAGTACGGAGAATGAGTAGGCTGAAGTGGGATGGGAAGGCCG AACCTGTCTCGCGAGATCTCAGGCGTGAACGGAGACAGGGAAATATTCAT TTTCCCTGGTCAGCTCACCACTATTAATAGCAGGATTGGAAACCATACCC GGTTGATCCATACCCGTACTCTGCTACTGGTATATGTGATGACCACATGA TATGATAAGTTGACGAGGTGCAGGAGTGCTGAACTTGCTCTCGATAAAAA AACAGGAGCGAATTGAGCAGCCTGTGTATACGTTCTGCACTGCATTGCAA GTACTGTACCCGAACTCGTACCTTGACTCCAGACAGTATAAGACAGTACT GTATGTATGTATGGTTACACATATAGCAAGAGTATGGATCAACCGGGTAA GGTTATCGGTCCTGCTCGTGGTCAGCTGCACAGGGAAAATTAATATTTTC CCTGAACGCGTTTGCGCCTGAGACTTTGGCCTCGCGAGACGGATTCGGCA GTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGATTCTAGT GCTTGCTTACGAGATTCCTCCAGAGTTCCGCGACAGCGTCCATCTGTTTA TTTTAAACTGTCATACGCCATCGGGCCAGTCCAGAATTTATAGGGTCACG CAATTGAGTACCGATGGCGTTCACTGCCGAGAGTTCGCCAGCACAGGGCC AGTAAACCTCAAGGTAATTCCGAACGAGTGCTGCCTTGGCAGGTCACCAT GAACCACTTAATATGCGCCTCTCTTTGCCACACCCACTATTGGTATATAG TGGGTATGCTTGACAGTACTGTAGCCTACTGTTTGTTCTTGGTGGCCCAC ATGGTATTCACTACCTGGTACTACTGTAGTTTCACTATTAAATGCAACAT TTGATAGTAATGAGAGATGCATGTTGTGTTTTTGTGGCATTAAGCTAAGC TATTTATATCGAATAACATCAATTGATAGATTTGATTGATTGAATCCTCC CATAATAAGCTGATGCAAAAATCCAGCCCGTGGTCACAAGATAAGATAAG ATAGAAGAAAAACACCATCCGGAAGGAAAAAACGTACGACGTACTCTATT CTCCATACAAAGAGAAAGCGGTAATGGTAAAAAATACTTGGAAAAAGAGA TACCTCTCTAGAAACCAAACGGCAGAGCGCACAGACGGTTTTTGGCTAAC AGCGTGTGGCTGCAGGGGCGCATGCATATCGAAGAACGATTGAACGAAGA GCCGCAGCTTACAATGAAATCGAAGAAGGATTGATCGAAGAAAGACAAAA CGAACTAAACGAAACAAACGGGATGCCGGAGAAAGACAACACGGCATCTG CAAACCAAAAAAACGCCCGGATGACACAAGTTCGCGCCATTTTTAATAGT GGCTAATCAACTATTATTACTATTAATTAATATGGCGAACGAACCAACAC AATGTACCCACTTTAACTTTTGGATATGCTGGCAAGGTTCCAGTGTCTGC AGAATGCTACACAGAAACAGTGTACTACTGTACCGGGTATTGATAGTATA CTGCCGCAGTAGGTACGGTCATCACACATAGCAGAGTATTGATCAACCGG GTAAGGTTGCCAAGCCTTCTCGTGGTCAGCTGAACAGAGAAAATGGACAT TTTCCTGTCCCCGTTCGCGCCTGAGAATTTGGTCTGGCGAGACGGGTTCG GCCGTCCCGTCCAGCGTCAGCCTGCTCATTCTCCATACTCAGGCTGGATA TAGTGCTTACTTACGGGATTCCTCTTGATTCCCGCGGTGGCGTCTATTTA CTTATTTCAACCGCCATACGCCATCGGGTCAGTCCCGAGTTCATCGGGTC ACGCGATTGCGTACCGATGGCGTCCACTGCCGACAGTCTGCCGGCGCAGG GCCAGTAAACCTCAAGGTAGTTCCAACAATGGGTGCTGCCTTGGCAGGTT AGGTCAACACGGACCAATTAATCTGCGCCTCTCTCTCCCACACCCACTAT TGATATGAAGTGGACACGATGAAAGTACCGGCTATATCTAGTACCGTATT TAATAGTATGCTGCTGTAGCTCTATTATATTATTATTATTAGAGTATTAG TATAATACAATAGTTGTGAACCGAGAGGTGATGGGTTGGGTTTACCTTAT AAGCCATTAAAAAATCCGGTCTGTGTGTATTAATAGCTTAAATCGATACT GTTTGTAGCACGGAAATTTCCTCCCCGAGTTGTATCTACAGTACAATAAT AGCCGTACAAACCGTTCCCTTGCCCAGGTGGTGACGATGGAAACTGTGGA ACCTGGTGAGAAAAAGGTCTACTGCAGGTGAGGAGAAGAACCTATGATGG TCTAATAGTATAATACGAGAACGCCTTCGTCTAATACTGTGTAGACACTT CTCTATCATCCACGTTCCGAGTCAGTCCATCTCAGATGCACGCATGCATG TAGTACGAGGTACTCGTAGGGCAGCAATTGAGGAATCTAGTTCCTGATCG TATCGAGACCATCGACCGGTGTTGTACTTCTGTTATTACCGTACATAATA AATCCTGCCGCCGCCTACCGTTTTTGTTTTGACCTGATTCACTCTTCGTC GAGAACGACCGACCCATTTCATTTTGATCTATTTGACTTTTGACAGGTGC TGGAAGTCGGGGACGTTTCCGCTATGCGACGGTTCGCATGCCAAGCACAA CGAGGCCACGGGCGACAACGTTGGCCCGCTCATCGTGTCTGGTCCCAAAT AATACTTGGGTACTCCGTATTAATGTTAATAAATGAAAAAGGATCAGGGG TGTAAATGTTAGGTGCTTCTTTGTACGGGCCAACGCCGAGGCGCCACTTC ATGGGCCGGTAGTCGCCCGCAGTGATGATGGCTTGAGACTATTTCAACTT ACTTTTCAAAAAGATTCTTTGACCGATGGCTTGCGTTCGAGATAGATAGT TGCCGTTTTGGCTCCCGTGGCGTCTTGGCCAAACCAACAAGAAATAACGA GGAAGGGGCTTTGTGGTTCGCTCATTTGCTTGCAACTACTTCGGTGGCTT TTGTTTCTTCTGATCGCTTTGCTTTTCGATGATGAGCGAACGTCCTCACT TCGGGGGTTCACAAGCAATCCTACTCGATTACTGTATAACGAATAGTACT TGTAGCCATTGAGATTGCTGCCCCGCTCGAAGATATCGAACGCCCGGCGT CGGTAACATCTTTTCACCTGACGACCGTGCGTTATCCCGAAGCACTATTA CAATGCCATACCTTCAC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig78:6879..12345-

>mRNA_F-serratus_M_contig78.19039.1 ID=mRNA_F-serratus_M_contig78.19039.1|Name=mRNA_F-serratus_M_contig78.19039.1|organism=Fucus serratus male|type=CDS|length=606bp|location=Sequence derived from alignment at F-serratus_M_contig78:6879..12345- (Fucus serratus male)
ATGAAAATCTCAGGTACTATCACCGCACTAGCTACCCTCGGCTGTACCGA
TGCATTTGTTTTTCCGGCGAGTGGGACGGCAGTACGCCAGCAGACCGCGA
GAAGTGCTGAACGCATGAATGAGAAGGTGGACCTAGACAAACCAAAGATG
AAAATCTCAGGTACTATCACCGCACTAGCTACCCTCGGCTGTACCGATGC
ATTTGTTTTTCCGGCGAGTGGGACGGCAGTACGCCAGCAGACCGCGAGAA
GTGCTGAACGCATGAATGAGAAGGTGGACCTAGACAAACCAAAGGTGGTG
ACGATGGAAACTGTGGAACCTGGTGAGAAAAAGGTCTACTGCAGGTGGTG
ACGATGGAAACTGTGGAACCTGGTGAGAAAAAGGTCTACTGCAGGTGCTG
GAAGTCGGGGACGTTTCCGCTATGCGACGGTTCGCATGCCAAGCACAACG
AGGCCACGGGCGACAACGTTGGCCCGCTCATCGTGTCTGGTCCCAAATAA
GTGCTGGAAGTCGGGGACGTTTCCGCTATGCGACGGTTCGCATGCCAAGC
ACAACGAGGCCACGGGCGACAACGTTGGCCCGCTCATCGTGTCTGGTCCC
AAATAA
back to top