mRNA_F-serratus_M_contig776.19016.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 248 bits (633), Expect = 3.310e-72 Identity = 158/430 (36.74%), Postives = 231/430 (53.72%), Query Frame = 2
Query: 173 QDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEF---------PGAVGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVK--KTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEGQF-----SETGAGVYGTVI---------KLAANKHASRRTKHIDVKHHLVRD 1387
+ G+V +YK R VA+ + G+ Y E YSP S+R +LA A+ E+ + + AFL +++EEIY+E+PE +E V L + +YGL QA WN + + GFE A ADPCV+ + +GE E +V ++VDD+L ++ +A + A + +KFR+KD+ A + +G I + + R L Q Y ES+++KF + K P GV +KADEP+ E+K +M+ P R VG+LM+ A TR DI+ AV + RF ENPG H A +K+ +YL TK+ GI Y G G EAY+D D D RR V G +LML + W S Q A ++EAEY+ALS+ +KE + E GA G + LA N RTKHID+++H +R+
Sbjct: 122 EKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQL-TKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRE 548
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 254 bits (650), Expect = 3.700e-71 Identity = 153/424 (36.08%), Postives = 231/424 (54.48%), Query Frame = 2
Query: 158 SENIGQDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVKKTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEGQF-----SETGAGVYGTVIK----------LAANKHASRRTKHIDVKHHLVR 1384
S ++GK++ +K R VA+ F + + Y SP PS+ASI+++LA+A K L H++ +QA+ A +DEE+++++P + + + + IYGL Q+G W D + GFEQ KADPCVF K+VD M++V++VDDIL D+ + A L +KF K++ + + GC I R+ +A L+ Q Y++SMV +FDVK T++IPA G K E EE ++P R A+G++MW +T +R D++ AVRAV R P H A+ KI YL T++ GITY +G GL + Y D A + RR V G + +S S+ Q + + ++EAEY+A E +KE F S G+ IK L N +S RTKHIDV++H +R
Sbjct: 789 SWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1202
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 254 bits (650), Expect = 6.120e-71 Identity = 153/424 (36.08%), Postives = 231/424 (54.48%), Query Frame = 2
Query: 158 SENIGQDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVKKTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEGQF-----SETGAGVYGTVIK----------LAANKHASRRTKHIDVKHHLVR 1384
S ++GK++ +K R VA+ F + + Y SP PS+ASI+++LA+A K L H++ +QA+ A +DEE+++++P + + + + IYGL Q+G W D + GFEQ KADPCVF K+VD M++V++VDDIL D+ + A L +KF K++ + + GC I R+ +A L+ Q Y++SMV +FDVK T++IPA G K E EE ++P R A+G++MW +T +R D++ AVRAV R P H A+ KI YL T++ GITY +G GL + Y D A + RR V G + +S S+ Q + + ++EAEY+A E +KE F S G+ IK L N +S RTKHIDV++H +R
Sbjct: 1168 SWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1581
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 254 bits (650), Expect = 6.210e-71 Identity = 153/424 (36.08%), Postives = 231/424 (54.48%), Query Frame = 2
Query: 158 SENIGQDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVKKTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEGQF-----SETGAGVYGTVIK----------LAANKHASRRTKHIDVKHHLVR 1384
S ++GK++ +K R VA+ F + + Y SP PS+ASI+++LA+A K L H++ +QA+ A +DEE+++++P + + + + IYGL Q+G W D + GFEQ KADPCVF K+VD M++V++VDDIL D+ + A L +KF K++ + + GC I R+ +A L+ Q Y++SMV +FDVK T++IPA G K E EE ++P R A+G++MW +T +R D++ AVRAV R P H A+ KI YL T++ GITY +G GL + Y D A + RR V G + +S S+ Q + + ++EAEY+A E +KE F S G+ IK L N +S RTKHIDV++H +R
Sbjct: 1188 SWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1601
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 254 bits (650), Expect = 6.310e-71 Identity = 153/424 (36.08%), Postives = 231/424 (54.48%), Query Frame = 2
Query: 158 SENIGQDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVKKTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEGQF-----SETGAGVYGTVIK----------LAANKHASRRTKHIDVKHHLVR 1384
S ++GK++ +K R VA+ F + + Y SP PS+ASI+++LA+A K L H++ +QA+ A +DEE+++++P + + + + IYGL Q+G W D + GFEQ KADPCVF K+VD M++V++VDDIL D+ + A L +KF K++ + + GC I R+ +A L+ Q Y++SMV +FDVK T++IPA G K E EE ++P R A+G++MW +T +R D++ AVRAV R P H A+ KI YL T++ GITY +G GL + Y D A + RR V G + +S S+ Q + + ++EAEY+A E +KE F S G+ IK L N +S RTKHIDV++H +R
Sbjct: 1331 SWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1744
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA) HSP 1 Score: 248 bits (634), Expect = 5.990e-70 Identity = 159/430 (36.98%), Postives = 232/430 (53.95%), Query Frame = 2
Query: 173 QDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEF---------PGAVGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVK--KTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEGQF-----SETGAGVYGTVI---------KLAANKHASRRTKHIDVKHHLVRD 1387
+ G+V +YK R VA+ + G+ Y E YSP SIR +L +A+ E+ + + AFL ++ EIY+E+PEE +E V L + +YGL QA WN + ++GFE A ADPCV+ + +GE E +V ++VDD+L ++ A + A + +KFR+KDM A + +G I + + R L Q Y ES+++KF + K P GV +KADEP+ E+K +M+ P R VG+LM+ A TR DI+ AV + RF ENPG H A +K+ +YL TK+ GI Y G G +EAY+D D D RR V G +LML + + W S Q A ++EAEY+ALS+ +KE + + GA G + LA N RTKHID+++H VR+
Sbjct: 453 EKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLEKCSAEGMEIEQCDVDTAFLYEKLEAEIYMELPEELRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQL-TKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFVRE 879
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A182HDZ7_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HDZ7_AEDAL) HSP 1 Score: 240 bits (612), Expect = 8.750e-70 Identity = 159/421 (37.77%), Postives = 229/421 (54.39%), Query Frame = 2
Query: 179 GKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEFPGA---VGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVK--KTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEG--------QFSETGAGVYG----TVIKLAANKHASRRTKHIDVKHHLVRDA 1390
GKV++YK R V + + +G+ Y E YSP +S+R L AMAA + ++ +A AFL+ DI+EEIY+E P F + PG V RLNK +YGL Q+ WN K + +G Q++ DPC++ + DG+ + V V+VDD+L + D A + A+L FR+KD+ A C+G ITR + + L DQ Y++SM+R+F+++ KT P + SK P PEE E M+ P + AVG LM+ A TR DI V + RF G H +AV +F+YL TK + Y G + Y+D D + LD RR G V +L A+SW + Q + T EAEY++LS ++E QF ET A + I +A N + RTKHID++HH +RDA
Sbjct: 75 GKVDRYKARLVIKGYSQRKGVDYDETYSPVVRHSSLRYLFAMAAKYNLQVDQMDAITAFLQGDIEEEIYMEQPPCFVK-PGGRQLVCRLNKALYGLKQSSRVWNTKLDAALKKLGLHQSEFDPCLYYWIEDGKV-LFVAVYVDDVLIFSNDAALKNNLKAKLSSTFRMKDLGSAVSCLGIRITRAKGSVSL--DQEAYIDSMLRRFNMQDAKTVSTPMNTAEKL-SKEMSPNTPEETERMKNIPYQEAVGCLMYLAQCTRPDILFTVNLLSRFNCCYGPKHWEAVKHLFRYLKGTKTIRLKYSAAGDSK-LVGYSDADWASDLDDRRSKSGYVFLLQGGAVSWCCKRQSTVSLSTCEAEYMSLSAAVQEASWWRGLVSQFGETDAIELRCDNQSTICIARNGGYTPRTKHIDIRHHYIRDA 489
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 239 bits (609), Expect = 4.030e-69 Identity = 150/419 (35.80%), Postives = 223/419 (53.22%), Query Frame = 2
Query: 173 QDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVKKTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEGQF-----SETGAGVYGTVIK----------LAANKHASRRTKHIDVKHHLVR 1384
+DGK+EK+K R VA+ F + + Y SP PS+ASI+++LA+A K +L H++ +QAF A +DE++++ +P E V + + IYGL Q+G W D + GFEQ KADPCVF K+ D D IL D + A+ L + F KD+ + + GC + R+ +A L+ Q Y++S+V +FDV+ T+ IPA+ GV K D+ E ++P R A+G++MW +T +R DI+ AVRAV R P H KA++KI YL T++ GITY +G GL + Y D D RR V G + IS S+ Q + + ++EAEY+A E +KE F S G+ I+ L N +S R+KHIDV++H +R
Sbjct: 57 KDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLAS-LNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDD-------ESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYE-RGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIR 465
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA) HSP 1 Score: 241 bits (615), Expect = 5.370e-69 Identity = 158/430 (36.74%), Postives = 231/430 (53.72%), Query Frame = 2
Query: 173 QDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPE---EFQEFPGAVGR------LNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVK--KTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTSEAEYVALSEVIKEGQF-----SETGAGVYGTVI---------KLAANKHASRRTKHIDVKHHLVRD 1387
+ G+V +YK R VA+ + G+ Y E YSP SIR +LA +A+ E+ + + AFL ++EEIY+E+ E E E A G L + +YGL QA WN + ++GFE A DPCV+ + +GE E +V ++VDD+L ++ +A + A + +KFR+KDM A + +G I + + R L Q Y ES+++KF + K P GV +KADEP+ E+K +M+ P R VG+LM+ + TR DI+ AV + RF ENPG H A +K+ +YL TK+ GI Y G G +EAY+D D D RR V G +LML + W S Q A ++EAEY+ALS+ +KE + + GA G + LA N TKHID+++H +RD
Sbjct: 187 EKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQL-TKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLIKDIGAEQVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRYHFIRD 613
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 243 bits (621), Expect = 6.410e-69 Identity = 149/430 (34.65%), Postives = 232/430 (53.95%), Query Frame = 2
Query: 158 SENIGQDGKVEKYKCRFVAQRFRPVEGMHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKVIYGLVQAGSCWNNKFCDGMTAIGFEQAKADPCVFCKVVDGEAEMVVVVHVDDILAHAKDQATMDRFAAELGQKFRLKDMDDAGYCMGCHITRNRKARELKFDQHLYVESMVRKFDVKKTTKIPAASGVPTPSKADEPRNPEEKEEMRKFPCRVAVGALMWTATMTRLDIACAVRAVVRFCENPGTAHKKAVMKIFQYLFHTKEWGITYGGQGCGLCMEAYTDWDCGACLDTRRWV*GAVLMLAKVAISWYSRMQDVTASGTS-------EAEYVALSEVIKEGQF-----SETGAGVYGTVIKLAANKHA---------SRRTKHIDVKHHLVR 1384
S ++GK++ +K R VA+ F + + Y SP PS+ASI+++LA+A K L H++ +QA+ A +DEE+++++P + + + + IYGL Q+G W D + GFEQ KADPCVF K+VD M++V++VDDIL D+ + A L +KF K++++ + GC I R+ + L+ Q Y++SMV++FDV+ T++IPA+ GV K D+ + E +P R A+G++MW +T +R D++ AVRAV R P H A+ KI YL T++ GITY +G GL + Y D A + RR V G + +S S+ Q + + ++ EAEY E +KE F S G+ I++ N+ A S RTKHIDV+ H +R
Sbjct: 343 SWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALFVRAVLSFVAPETSGSSIQVLDNQGAMALVQNPLSSGRTKHIDVRFHFIR 762 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig776.19016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig776.19016.1 >prot_F-serratus_M_contig776.19016.1 ID=prot_F-serratus_M_contig776.19016.1|Name=mRNA_F-serratus_M_contig776.19016.1|organism=Fucus serratus male|type=polypeptide|length=305bp MHYTEKYSPTPSTASIRMLLAMAAAKDGELRHFEAEQAFLKADIDEEIYIback to top mRNA from alignment at F-serratus_M_contig776:244357..245749- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig776.19016.1 ID=mRNA_F-serratus_M_contig776.19016.1|Name=mRNA_F-serratus_M_contig776.19016.1|organism=Fucus serratus male|type=mRNA|length=1393bp|location=Sequence derived from alignment at F-serratus_M_contig776:244357..245749- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig776:244357..245749- >mRNA_F-serratus_M_contig776.19016.1 ID=mRNA_F-serratus_M_contig776.19016.1|Name=mRNA_F-serratus_M_contig776.19016.1|organism=Fucus serratus male|type=CDS|length=1830bp|location=Sequence derived from alignment at F-serratus_M_contig776:244357..245749- (Fucus serratus male)back to top |