mRNA_F-serratus_M_contig741.18673.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A2N9GV19_FAGSY (Integrase catalytic domain-containing protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV19_FAGSY) HSP 1 Score: 244 bits (623), Expect = 3.100e-70 Identity = 145/386 (37.56%), Postives = 217/386 (56.22%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGCSIDQQR-----------YAQTVTERFEIRKTSAILVPTGKAP-LSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
IG K VFK K G++E+YK R VAKGF Q +G+ Y+E SP ++ S R+ +A++A D + Q DV+ AFL D+TE++Y+ PDG++ S + V +L+K+ YG+ A W KF + + GF+ + D C++ K G ++ +V+YVDD+L+ + + L +F +KDLGE S+ LG I + R Y V ERF + +A P K LSK PQ+D E EM+ I Y AVG+LM+ TRPD A+ L +F +PG +HW+A K L+YL+RT +TY ++ +++ + DAD+A C D +S SG ML G AISW Q + A++T ++EYVA E + +LR
Sbjct: 322 IGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDLELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYL-KISGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYLQRTKDFMLTYR-RSDLLEVVGYADADYAGCADDLKSTSGYVFMLAGGAISWKSVKQTLTASSTMQAEYVACYEATLQAVWLR 705
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A4Q3DG62_9RICK (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DG62_9RICK) HSP 1 Score: 240 bits (613), Expect = 5.950e-70 Identity = 143/387 (36.95%), Postives = 212/387 (54.78%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGY--RDSPNQVGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGCSIDQQR-----------YAQTVTERFEIRKTSAILVP--TGKAPLSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
IG K ++KRK G DG+VE +K R VAKGF Q +GI Y E SP SIR+ LA+ A D++ WQ DV+ AFL + EE+Y+ PDG+ + ++V +L K+ YG+ A W+++F + GFE + ++PCV+ K+ KVVV +V+YVDD+L++ + E L F +KDLG ++ LG I + R Y V RF ++ +L+P +GK LSK P+ E+ +M + Y AVG+LM+ TRPD Y ++++ NPG EHW AV L+YLKRT + + Y + D+ + + D+D + D +S SG L G AI W Q A +T E+EY+A E E +L+
Sbjct: 177 IGCKWIYKRKKGADGQVETFKARLVAKGFTQREGIDYDETFSPVAMFKSIRILLAIAAHYDYEIWQMDVKTAFLNGYLEEEIYMAQPDGFIEKGQEHKVCKLLKSIYGLKQASRSWNQRFDEVIKTYGFEQNLSEPCVY--KYSKKVVVFLVLYVDDILLIGSDIKVMSDIKEWLAKQFQMKDLGNAAFVLGIQIIRDRKNKLLALSQGTYIDKVLSRFSMQNAHGVLLPIRSGKF-LSKEQCPKTPQEVEDMSRVPYASAVGSLMYAMLCTRPDICYAVGVVSRYQSNPGQEHWIAVKHILKYLKRTRDMMLVY--TSNDLVIQGYTDSDFQADRDMLKSTSGSVFTLNGGAIVWRSIKQSSIADSTMEAEYIAASEAAKEAVWLK 558
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A2N9HDZ1_FAGSY (RNase H type-1 domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HDZ1_FAGSY) HSP 1 Score: 245 bits (625), Expect = 7.560e-69 Identity = 146/386 (37.82%), Postives = 218/386 (56.48%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGCSIDQQR-----------YAQTVTERFEIRKTSAILVPTGKAP-LSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
IG K VFK K G++E+YK R VAKGF Q +GI Y+E SP ++ S R+ +A++A D++ Q DV+ AFL D+TE++Y+ P+G++ S + V +L+K+ YG+ A W KF + + GF+ + D C++ K G ++ +V+YVDD+L+ + + L +F +KDLGE S+ LG I + R Y V ERF + SA P K LSK PQ+D E EM+ I Y AVG+LM+ TRPD A+ L +F +PG +HW+A K L+YL+RT +TY ++ +++ + DAD+A C D +S SG ML G AISW Q + A++T ++EYVA E + +LR
Sbjct: 524 IGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGIDYKETFSPVSSKDSFRIVMALVAHFDFELHQMDVKTAFLNGDLTEDVYMLQPNGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYL-KISGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCSAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYLQRTKDFMLTYR-RSDLLEVIGYADADYAGCADDLKSTSGYVFMLAGGAISWKSVKQTLTASSTMQAEYVACYEATLQAVWLR 907
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A2N9EBY4_FAGSY (Integrase catalytic domain-containing protein n=4 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EBY4_FAGSY) HSP 1 Score: 243 bits (619), Expect = 2.740e-68 Identity = 144/386 (37.31%), Postives = 217/386 (56.22%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGCSIDQQR-----------YAQTVTERFEIRKTSAILVPTGKAP-LSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
IG K VFK K G++E+YK R VAKGF Q +G+ Y+E SP ++ S R+ +A++A D++ Q DV+ AFL D+TE++Y+ PDG++ S + V +L+K+ YG+ A W KF + + GF+ + D C++ K G ++ +V+YVDD+L+ + + L +F +KDLGE S+ LG I + R Y V ERF + +A P K LSK PQ+D E EM+ I Y AVG+LM+ TRPD A+ L +F +P +HW+A K L+YL+RT +TY + + +++ + DAD+A C D +S SG ML G AISW Q + A++T ++EYVA E + +LR
Sbjct: 680 IGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDFELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYL-KISGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPSMDHWRAAKKVLRYLQRTKDFMLTYRHS-DLLEVVGYADADYAGCADDLKSTSGYVFMLAGGAISWKSVKQTLTASSTMQAEYVACYEATLQAVWLR 1063
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 232 bits (591), Expect = 4.230e-68 Identity = 139/384 (36.20%), Postives = 213/384 (55.47%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGC-----------SIDQQRYAQTVTERFEIRKTSAILVPTGKA-PLSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
I TK VF +K + G + ++K R VA GF Q+ G+ + E + + SIR+ L+V + Q DV+ AFL AD+ E++Y+E P+G + ++V +L KA YG+ AG W K G LI GF+ +D C++ + G I +YVDD++V T+ + + + + F IK+LG + + LG SI+Q Y +T+ ERF + + P ++ LSKADGP+DD + AEM YR +G L +VA TRPD A+ L++F +NPG HW A ++ L+YLK T G++YGG E+ + DAD + D RRSVSG +M+ G I + + Q A ++SE+EY+AL E+ ++R
Sbjct: 38 IKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVR 420
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A015J5I9_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J5I9_RHIIW) HSP 1 Score: 241 bits (615), Expect = 1.380e-67 Identity = 138/386 (35.75%), Postives = 211/386 (54.66%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGYRDS--PNQVGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGCSIDQQR-----------YAQTVTERFEIRKTSAILVPT-GKAPLSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
+G K +FK+K DG+V +K R VAKGF Q G+ Y E SP SIR+ LA+ A D++ WQ DV+ AFL +TE++Y+ P+G+ D+ PN+V +L+++ YG+ A W+ F ++ GF S+ + CV+ K G +V +V+YVDD+L++ L F +KDLGE +Y LG I + R Y + V +RF + + +P A LSK P D EIAEM + Y AVG++M+ TRPD A+ ++++ NPG HW AV L+YL+RT ++ + GG+ + +++ + DA + D+ RS SG +L G A++W Q A +T ESEY+A E E +L+
Sbjct: 822 VGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYV-KASGSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLGGS-DTLRVEGYTDASFQTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKEAAWLK 1205
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A535FA79_9CHLR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535FA79_9CHLR) HSP 1 Score: 224 bits (572), Expect = 1.120e-66 Identity = 128/381 (33.60%), Postives = 204/381 (53.54%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGY--RDSPNQVGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGCSI-----------DQQRYAQTVTERFEIRKTSAILVPTGKAP-LSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNE 1101
+G K ++KRK+ DG V YK R VAKG+ Q GI +++ SP SIR+ LA+ A D++ WQ DV+ AFL ++ EE+Y+E P G+ S ++V RL ++ YG+ A W+ +F + GF + +PCV+ + V I+VYVDD+L++ K++ + E L S F +KDLGE ++ LG I Q +Y + +RF + + +P LSK+ PQ D E +M I Y A+G++M+ TRPD A+ +++ +PG HW A L+YL++T L + YG +++ + + D+ S D +S SG ++ G A++W Q A +T+E+EY+A E E
Sbjct: 3 VGCKWLYKRKLDADGNVATYKARLVAKGYTQRPGIDFEDTFSPVAMPKSIRILLAIAAYYDYEIWQMDVKTAFLNGNIKEEIYMEQPMGFISSGSADKVCRLNRSIYGLKQASRSWNIRFDEAVKGYGFVKNTYEPCVYTKTSTD-AVEFIIVYVDDILLIGNNKEEMTSSKEWLSSQFSMKDLGEANFVLGIKIFRDRTNRLLGLSQAQYIDKIVKRFNLENSKRGYLPERHGVVLSKSQSPQTDEERRKMERIPYASAMGSIMYAMLCTRPDVAHALGVASRYQSDPGEAHWGAAKTILKYLRKTRDLFLVYGA--KELVIEGFTDSSFQSDVDDFKSTSGYVFLINGGAVTWRSCKQATVADSTTEAEYIAASEAAKE 380
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF) HSP 1 Score: 238 bits (608), Expect = 1.180e-66 Identity = 141/386 (36.53%), Postives = 210/386 (54.40%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGY--RDSPNQVGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGCSI-----------DQQRYAQTVTERFEIRKTSAILVPTGKA-PLSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
IG K ++KRK G DG+V+ +K R VAKG+ QI+GI Y E SP SIR+ LAV A +D++ WQ DV+ AFL ++ E++Y++ P+G+ + V +L ++ YG+ A W+ +F + + GF + CV++ K G VVV +V+YVDD+L++ +K++ L F +KDLGE + LG + Q Y TV RF ++ + ++P PLSK P+ EI EM+ + Y AVG+LM+ TRPD +Y +A++ NPG EHW AV L+YL+RT + Y + + + D+D S D +S SG LG AISW Q A +T E+EY+A E E +LR
Sbjct: 836 IGCKWIYKRKRGLDGKVQTFKARLVAKGYTQIEGIDYDETFSPVAMLKSIRILLAVAAHMDYEVWQMDVKTAFLNGNLQEDIYMQQPEGFIAEGREHLVCKLNRSIYGLKQASRSWNIRFDEVIQSYGFTQCPDEHCVYK-KISGSVVVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRHGIPLSKEMSPKTSKEIEEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARYQSNPGREHWSAVKHILKYLRRTKEYMLVY--RADSLLPLGYSDSDFQSDRDESKSTSGYVFTLGSGAISWRSAKQKCVADSTMEAEYIAASEAAKEAVWLR 1218
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048) HSP 1 Score: 238 bits (607), Expect = 1.270e-66 Identity = 143/385 (37.14%), Postives = 209/385 (54.29%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGCSI-----------DQQRYAQTVTERFEIRKTSAILVPTGKA-PLSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
+ K VFK K +V KYK R V KGF Q KGI + E SP SIR+ L ++A ++ + Q DV+ AFL + EE+Y+E P+G+ S N V +L+K+ YG+ A W KKF + ++G++ + AD CV+ +K V +++YVDD+L++ + + +Q ++L SF +KDLG LG I Q++Y + V RF + + +P LSK P EI EM + Y AVG+LM+ TRPD A+ +++F NPG EHW+AV L+YLK T L + YGGA D L + DAD A D+R+S SG G A+SW R Q A +T+E+EY+A E E+ +L+
Sbjct: 690 LKNKWVFKLKKDGSEKVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGGA--DPILEGYTDADMAGDLDSRKSTSGFIFTFAGGAVSWQSRLQKCVALSTTEAEYIAAAEAGKEMLWLK 1072
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Match: A0A225WDK2_9STRA (Integrase, catalytic core protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDK2_9STRA) HSP 1 Score: 230 bits (586), Expect = 2.030e-66 Identity = 139/387 (35.92%), Postives = 221/387 (57.11%), Query Frame = 1
Query: 1 IGTKTVFKRKVGQDGRVEKYKCRFVAKGFGQIKGIHYQEPSSPTPTQLSIRMALAVMALLDWQGWQHDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKATYGVMHAGLLWSKKFGGELIAKGFETSQADPCVFRRKHLGKVVVIIVVYVDDLLVLNETKQDEHQALEDL*SSFPIKDLGEISYYLGC-----------SIDQQRYAQTVTERFEIRKTSAILVPTG-KAPLSKADGPQDDTEIAEMRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALQYLKRTASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSGGAVMLGGRAISWFLRAQIIAATATSESEYVALVEIVNELRFLR 1116
+ +K +FK K G +E+YK R V +G+ QIK I Y+E +P S+R+ LA++A+ DW+ Q DV+ AFL D+ EE+Y+ P+G ++ + V +L +A YG+ A W KK L +KGF +D C++ R G V II +YVDDLL++ +T + L + F KD+G + + LG SIDQ YA+ V E+F + + + P LSK + P+++ E A+M+ YR VG+LM++ +RPD A+ ++K+ ++PG HW A + L+Y+K T G+ G + K L+A+VD+D+A DTRRSVSG + +G AI++ ++Q A +++E+EY++L V E+ FLR
Sbjct: 85 LTSKWIFKIKYDALGNIERYKARLVIRGYEQIKYIDYEEIFAPVIRLESLRLLLALVAINDWECEQTDVDTAFLNGDLAEEVYMIQPEGLEEAGKEDLVCQLLQALYGLKQAPRAWHKKLTDYLKSKGFVKLDSDSCIYVRTG-GSGVAIIGIYVDDLLLIADTASRIQEMKSMLSAGFKCKDMGAVHHILGLRVKRNRALKTLSIDQTAYAKGVIEKFNLMQLNPCKTPCDPNVILSKENCPKNEDERAQMKNKDYRGLVGSLMYLMTGSRPDIAFGIQCVSKYLNDPGLAHWNAAKRILRYVKGTIGYGLVIDGRSRTGKQLTAFVDSDYAKDIDTRRSVSGYVMQMGDCAITYSCKSQRTVALSSTEAEYMSLAHGVKEMLFLR 470 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig741.18673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig741.18673.1 >prot_F-serratus_M_contig741.18673.1 ID=prot_F-serratus_M_contig741.18673.1|Name=mRNA_F-serratus_M_contig741.18673.1|organism=Fucus serratus male|type=polypeptide|length=135bp MRGITYREAVGALMWVANMTRPDSAYTAHTLAKFGDNPGHEHWKAVMKALback to top mRNA from alignment at F-serratus_M_contig741:97520..98635+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig741.18673.1 ID=mRNA_F-serratus_M_contig741.18673.1|Name=mRNA_F-serratus_M_contig741.18673.1|organism=Fucus serratus male|type=mRNA|length=1116bp|location=Sequence derived from alignment at F-serratus_M_contig741:97520..98635+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig741:97520..98635+ >mRNA_F-serratus_M_contig741.18673.1 ID=mRNA_F-serratus_M_contig741.18673.1|Name=mRNA_F-serratus_M_contig741.18673.1|organism=Fucus serratus male|type=CDS|length=810bp|location=Sequence derived from alignment at F-serratus_M_contig741:97520..98635+ (Fucus serratus male)back to top |