mRNA_F-serratus_M_contig720.18449.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2X5Y1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X5Y1_CAPBA) HSP 1 Score: 75.1 bits (183), Expect = 6.770e-12 Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 286 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 675
N E+G N P KF+GKCFNCGK GH++ DC+ KK +K A K+ G W DSGAT H+ ++ Y A +I +A+ T V+G GK+ +++ + K++ +++V YVP L RNL+S
Sbjct: 17 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDNLCAMFTECNMVGNPRAWWMDSGATLHVCASKELFSTYAPAQAEETIYMANSTTAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 158
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: UPI001F43F645 (hypothetical protein n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F43F645) HSP 1 Score: 73.9 bits (180), Expect = 1.240e-11 Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 1
Query: 289 RENGKNRRPSNK-FEGKCFNCGKRGHRAVDCKGTKKN-EKPGAAAEKKE---------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVE 693
R +GK + P+ K F+G C+NCGK GH+A DC+ KK+ EK A E G EW DSGAT H+ + Y A P + + + T V+G+GK+ +++ + K++ +++V +VP + +NLVS V+
Sbjct: 246 RHSGKEKNPNKKKFKGNCYNCGKAGHKAPDCRAPKKDKEKNKGQANMVEDVDDLCAMLSECNMVGNPKEWWLDSGATRHVCAVKEAFTTYTPAGPNEELYMGNTATAKVEGYGKVLLKMT----SGKVLTLNNVMHVPSIRKNLVSAALLVK 393
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2V5Q5_CAPBA (Geraniol 8-hydroxylase n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V5Q5_CAPBA) HSP 1 Score: 73.2 bits (178), Expect = 2.970e-11 Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 286 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 675
N E+G N P KF+GKCFNCGK GH++ DC+ KK +K A K+ G W DSGAT H+ ++ Y A +I +A+ T V+G GK+ +++ + K++ +++V YVP L RNL+S
Sbjct: 693 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRAWWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 834
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2VDA6_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VDA6_CAPBA) HSP 1 Score: 73.2 bits (178), Expect = 3.080e-11 Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 286 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 675
N E+G N P KF+GKCFNCGK GH++ DC+ KK +K A K+ G W DSGAT H+ ++ Y A +I +A+ T V+G GK+ +++ + K++ +++V YVP L RNL+S
Sbjct: 252 NVEHGSNH-PKKKFKGKCFNCGKIGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRAWWMDSGATHHVCESKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 393
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2W247_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W247_CAPBA) HSP 1 Score: 73.2 bits (178), Expect = 3.190e-11 Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 286 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 675
N E+G N P KF+GKCFNCGK GH++ DC+ KK +K A K+ G W DSGAT H+ ++ Y A +I +A+ T V+G GK+ +++ + K++ +++V YVP L RNL+S
Sbjct: 728 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRAWWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 869
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G3BPT2_CAPCH (Uncharacterized protein n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3BPT2_CAPCH) HSP 1 Score: 69.7 bits (169), Expect = 4.380e-10 Identity = 49/145 (33.79%), Postives = 75/145 (51.72%), Query Frame = 1
Query: 292 ENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 675
E G N+ P KF+GKCFNCGK GH+++DC+ KK +K A KE G EW DSG T H+ + ++ A I +A+ T V+G GK+ +++ + K++ +++V Y+P L RNL+S
Sbjct: 392 EQGSNQ-PKKKFKGKCFNCGKIGHKSMDCRAPKKGKKKYQANMFESNKEYDDLCAMFSEYNLVGDPREWWMDSGVTRHVCANKELFSSFAPAQVEEMIYMANSVTAKVEGTGKVCLKMT----SGKVLTLNNVLYIPELRRNLIS 531
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A0J8B0L4_BETVV (CCHC-type domain-containing protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B0L4_BETVV) HSP 1 Score: 65.9 bits (159), Expect = 1.200e-9 Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 1
Query: 310 RPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAAAEKKEGGGGEWES---------DSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKA 687
+P + G+CFNCGKRGH A DC+ KK E+ + E G + E DSGA+ HM+ + + N+ + I ADG T+ G G ++V GR K V + DV YVP L NL+S A
Sbjct: 57 KPKRQPRGRCFNCGKRGHFAKDCRSPKKKEESSSTDELAFVAGDQEELYAVAESCYVDSGASRHMTGNKGLLSNFVELLDAVKIVTADGRTICGIGTGDMKV-----GRG-KTVTLKDVLYVPDLKMNLLSVSAA 185
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2V8S1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V8S1_CAPBA) HSP 1 Score: 66.6 bits (161), Expect = 4.860e-9 Identity = 48/147 (32.65%), Postives = 75/147 (51.02%), Query Frame = 1
Query: 286 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 675
N E+G N+ P KF+GKCFNCGK GH++ DC+ KK +K A K+ G W DSGAT ++ ++ Y A +I +A+ T V+ GK+ +++ + K++ +++ YVP L RNL+S
Sbjct: 19 NVEHGSNQ-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRAWWMDSGATRYVCASKEFFSTYAPAQAEETIYMANSATAKVEEIGKVCLKMT----SRKVLTLNNELYVPELRRNLIS 160
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2YZ05_CAPAN (Uncharacterized protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2YZ05_CAPAN) HSP 1 Score: 65.9 bits (159), Expect = 8.870e-9 Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 1
Query: 292 ENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 675
E+G N+ P KF+GKCFNCGK GH++ DC+ KK K A KE G EW DSGAT H+ + ++ A + + T V+ GKI +++ + K++ +++V YVP L RNL+S
Sbjct: 115 EHGSNQ-PKKKFKGKCFNCGKIGHKSTDCQAPKKGNKKDQANMIESNKEYDDLCAMFTECNLVGNPREWWMDSGATRHVCANKELFSSFAPAQAEEMFYMTNSATDKVEETGKICLKMT----SGKVLTLNNVLYVPELRRNLIS 254
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A0J7K988_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K988_LASNI) HSP 1 Score: 65.9 bits (159), Expect = 9.200e-9 Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 334 KCFNCGKRGHRAVDCKGTKKNEKPG-----AAAEKKE-------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 675
KCFNCGKRGH A +C+ KK++K + KKE G +W +DSGA+ HM+ R ++ + T++ +AD +TL V G G I V G+ V++ DV YVP L R+L S
Sbjct: 233 KCFNCGKRGHFARECRMPKKDDKSNKDERSTSKSKKEDSEETCNVEVNTISSGVDWIADSGASVHMTSQREIFTSFVEEK--TALSLADSSTLMVRGRGNIRVTSYVKGKVVD-VKLQDVYYVPELRRSLFS 361 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig720.18449.1 >prot_F-serratus_M_contig720.18449.1 ID=prot_F-serratus_M_contig720.18449.1|Name=mRNA_F-serratus_M_contig720.18449.1|organism=Fucus serratus male|type=polypeptide|length=232bp MEPGSDPFKFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMECback to top mRNA from alignment at F-serratus_M_contig720:298566..299465- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig720.18449.1 ID=mRNA_F-serratus_M_contig720.18449.1|Name=mRNA_F-serratus_M_contig720.18449.1|organism=Fucus serratus male|type=mRNA|length=900bp|location=Sequence derived from alignment at F-serratus_M_contig720:298566..299465- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig720:298566..299465- >mRNA_F-serratus_M_contig720.18449.1 ID=mRNA_F-serratus_M_contig720.18449.1|Name=mRNA_F-serratus_M_contig720.18449.1|organism=Fucus serratus male|type=CDS|length=1392bp|location=Sequence derived from alignment at F-serratus_M_contig720:298566..299465- (Fucus serratus male)back to top |