prot_F-serratus_M_contig720.18449.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig720.18449.1
Unique Nameprot_F-serratus_M_contig720.18449.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length232
Homology
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2X5Y1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X5Y1_CAPBA)

HSP 1 Score: 75.1 bits (183), Expect = 6.770e-12
Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   96 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 225
            N E+G N  P  KF+GKCFNCGK GH++ DC+  KK +K   A      K+              G    W  DSGAT H+  ++     Y  A    +I +A+  T  V+G GK+ +++     + K++ +++V YVP L RNL+S
Sbjct:   17 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDNLCAMFTECNMVGNPRAWWMDSGATLHVCASKELFSTYAPAQAEETIYMANSTTAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 158          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: UPI001F43F645 (hypothetical protein n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F43F645)

HSP 1 Score: 73.9 bits (180), Expect = 1.240e-11
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0
Query:   97 RENGKNRRPSNK-FEGKCFNCGKRGHRAVDCKGTKKN-EKPGAAAEKKE---------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVE 231
            R +GK + P+ K F+G C+NCGK GH+A DC+  KK+ EK    A   E               G   EW  DSGAT H+   +     Y  A P   + + +  T  V+G+GK+ +++     + K++ +++V +VP + +NLVS    V+
Sbjct:  246 RHSGKEKNPNKKKFKGNCYNCGKAGHKAPDCRAPKKDKEKNKGQANMVEDVDDLCAMLSECNMVGNPKEWWLDSGATRHVCAVKEAFTTYTPAGPNEELYMGNTATAKVEGYGKVLLKMT----SGKVLTLNNVMHVPSIRKNLVSAALLVK 393          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2V5Q5_CAPBA (Geraniol 8-hydroxylase n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V5Q5_CAPBA)

HSP 1 Score: 73.2 bits (178), Expect = 2.970e-11
Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   96 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 225
            N E+G N  P  KF+GKCFNCGK GH++ DC+  KK +K   A      K+              G    W  DSGAT H+  ++     Y  A    +I +A+  T  V+G GK+ +++     + K++ +++V YVP L RNL+S
Sbjct:  693 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRAWWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 834          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2VDA6_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VDA6_CAPBA)

HSP 1 Score: 73.2 bits (178), Expect = 3.080e-11
Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   96 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 225
            N E+G N  P  KF+GKCFNCGK GH++ DC+  KK +K   A      K+              G    W  DSGAT H+  ++     Y  A    +I +A+  T  V+G GK+ +++     + K++ +++V YVP L RNL+S
Sbjct:  252 NVEHGSNH-PKKKFKGKCFNCGKIGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRAWWMDSGATHHVCESKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 393          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2W247_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W247_CAPBA)

HSP 1 Score: 73.2 bits (178), Expect = 3.190e-11
Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   96 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 225
            N E+G N  P  KF+GKCFNCGK GH++ DC+  KK +K   A      K+              G    W  DSGAT H+  ++     Y  A    +I +A+  T  V+G GK+ +++     + K++ +++V YVP L RNL+S
Sbjct:  728 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRAWWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 869          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G3BPT2_CAPCH (Uncharacterized protein n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3BPT2_CAPCH)

HSP 1 Score: 69.7 bits (169), Expect = 4.380e-10
Identity = 49/145 (33.79%), Postives = 75/145 (51.72%), Query Frame = 0
Query:   98 ENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 225
            E G N+ P  KF+GKCFNCGK GH+++DC+  KK +K   A      KE              G   EW  DSG T H+   +    ++  A     I +A+  T  V+G GK+ +++     + K++ +++V Y+P L RNL+S
Sbjct:  392 EQGSNQ-PKKKFKGKCFNCGKIGHKSMDCRAPKKGKKKYQANMFESNKEYDDLCAMFSEYNLVGDPREWWMDSGVTRHVCANKELFSSFAPAQVEEMIYMANSVTAKVEGTGKVCLKMT----SGKVLTLNNVLYIPELRRNLIS 531          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A0J8B0L4_BETVV (CCHC-type domain-containing protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B0L4_BETVV)

HSP 1 Score: 65.9 bits (159), Expect = 1.200e-9
Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 0
Query:  104 RPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAAAEKKEGGGGEWES---------DSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKA 229
            +P  +  G+CFNCGKRGH A DC+  KK E+  +  E     G + E          DSGA+ HM+  +  + N+ +      I  ADG T+   G G ++V     GR  K V + DV YVP L  NL+S   A
Sbjct:   57 KPKRQPRGRCFNCGKRGHFAKDCRSPKKKEESSSTDELAFVAGDQEELYAVAESCYVDSGASRHMTGNKGLLSNFVELLDAVKIVTADGRTICGIGTGDMKV-----GRG-KTVTLKDVLYVPDLKMNLLSVSAA 185          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2V8S1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V8S1_CAPBA)

HSP 1 Score: 66.6 bits (161), Expect = 4.860e-9
Identity = 48/147 (32.65%), Postives = 75/147 (51.02%), Query Frame = 0
Query:   96 NRENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 225
            N E+G N+ P  KF+GKCFNCGK GH++ DC+  KK +K   A      K+              G    W  DSGAT ++  ++     Y  A    +I +A+  T  V+  GK+ +++     + K++ +++  YVP L RNL+S
Sbjct:   19 NVEHGSNQ-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRAWWMDSGATRYVCASKEFFSTYAPAQAEETIYMANSATAKVEEIGKVCLKMT----SRKVLTLNNELYVPELRRNLIS 160          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A2G2YZ05_CAPAN (Uncharacterized protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2YZ05_CAPAN)

HSP 1 Score: 65.9 bits (159), Expect = 8.870e-9
Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 0
Query:   98 ENGKNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAA---AEKKE--------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 225
            E+G N+ P  KF+GKCFNCGK GH++ DC+  KK  K   A      KE              G   EW  DSGAT H+   +    ++  A       + +  T  V+  GKI +++     + K++ +++V YVP L RNL+S
Sbjct:  115 EHGSNQ-PKKKFKGKCFNCGKIGHKSTDCQAPKKGNKKDQANMIESNKEYDDLCAMFTECNLVGNPREWWMDSGATRHVCANKELFSSFAPAQAEEMFYMTNSATDKVEETGKICLKMT----SGKVLTLNNVLYVPELRRNLIS 254          
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Match: A0A0J7K988_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K988_LASNI)

HSP 1 Score: 65.9 bits (159), Expect = 9.200e-9
Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 0
Query:  112 KCFNCGKRGHRAVDCKGTKKNEKPG-----AAAEKKE-------------GGGGEWESDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQPGRTTKMVRMDDVAYVPGLSRNLVS 225
            KCFNCGKRGH A +C+  KK++K        +  KKE               G +W +DSGA+ HM+  R    ++ +    T++ +AD +TL V G G I V     G+    V++ DV YVP L R+L S
Sbjct:  233 KCFNCGKRGHFARECRMPKKDDKSNKDERSTSKSKKEDSEETCNVEVNTISSGVDWIADSGASVHMTSQREIFTSFVEEK--TALSLADSSTLMVRGRGNIRVTSYVKGKVVD-VKLQDVYYVPELRRSLFS 361          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig720.18449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G2X5Y1_CAPBA6.770e-1234.69Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
UPI001F43F6451.240e-1132.24hypothetical protein n=1 Tax=Corynebacterium parak... [more]
A0A2G2V5Q5_CAPBA2.970e-1134.69Geraniol 8-hydroxylase n=1 Tax=Capsicum baccatum T... [more]
A0A2G2VDA6_CAPBA3.080e-1134.69Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A2G2W247_CAPBA3.190e-1134.69Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A2G3BPT2_CAPCH4.380e-1033.79Uncharacterized protein n=1 Tax=Capsicum chinense ... [more]
A0A0J8B0L4_BETVV1.200e-936.30CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A2G2V8S1_CAPBA4.860e-932.65Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A2G2YZ05_CAPAN8.870e-933.79Uncharacterized protein n=1 Tax=Capsicum annuum Ta... [more]
A0A0J7K988_LASNI9.200e-936.36Integrase core domain protein n=1 Tax=Lasius niger... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 112..128
e-value: 0.0018
score: 27.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 111..127
e-value: 1.0E-5
score: 25.4
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 112..127
score: 10.296
NoneNo IPR availableGENE3D4.10.60.10coord: 91..143
e-value: 4.6E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 82..227
NoneNo IPR availablePANTHERPTHR34676:SF1coord: 82..227
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 96..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig720contigF-serratus_M_contig720:298566..299465 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig720.18449.1mRNA_F-serratus_M_contig720.18449.1Fucus serratus malemRNAF-serratus_M_contig720 298566..299465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig720.18449.1 ID=prot_F-serratus_M_contig720.18449.1|Name=mRNA_F-serratus_M_contig720.18449.1|organism=Fucus serratus male|type=polypeptide|length=232bp
MEPGSDPFKFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMEC
RMLENNPDGLNRGEIERVVGNQYNRLLRQQQDSKALSASRGTITANRENG
KNRRPSNKFEGKCFNCGKRGHRAVDCKGTKKNEKPGAAAEKKEGGGGEWE
SDSGATFHMSLTRAGMFNYKKASPGTSIEIADGNTLPVDGFGKIEVELDQ
PGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf