mRNA_F-serratus_M_contig687.17932.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 327 bits (837), Expect = 8.980e-106 Identity = 161/229 (70.31%), Postives = 177/229 (77.29%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIEL 681
MSF VQEKSWCD REC LWI +SWKLRPNNGSI++Q ILVLDDFKCH+D FI R NT VI IP GLTPLLQP DRMLNK+MKRL+RG YT +TA A +PKT KL PPGRGAV+T CK WA+ITPE CF+ICGLTLAL+GSEDH WC HNFG+GYRELL+QQRVEW A HPNVTLPPLQLPKVP S + I AA KELEA LLP D SDIE+
Sbjct: 337 MSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAGLLPRGDD----SDIEI 561
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 323 bits (829), Expect = 1.180e-104 Identity = 160/229 (69.87%), Postives = 177/229 (77.29%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIEL 681
MSF VQEKSWCD RE LWI +SWKLRPNNGS+++Q ILVLDDFKCH+D FI R NT VI IP GLTPLLQP DRMLNK+MKRL+RG YT +TA A +PKT KL PPGRGAV+T CK WA+ITPE V CF+ICGLTLAL+GSEDH WC HNFG+GYRELL+QQRVEW A HPNVTLPPLQLPKVP S + I AA KELEA LLP D SDIE+
Sbjct: 330 MSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAGLLPRGDD----SDIEI 554
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 313 bits (802), Expect = 1.760e-104 Identity = 156/253 (61.66%), Postives = 189/253 (74.70%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEVG 753
MSF VQEKSW D REC WIS SWK RPNNGSI++Q P ILVLDDFKC +D+ FI R NT I IP GLTPLLQP DR+LNK+MKR++RGKYT Y+ASA+A+ ++ KLKPP RG VST C E W +I PE V CF+ICGLTLAL+G EDH W HNFGE YR+LL++Q W A HP+ TLPPL+LP+VP +PIT A+KE+E KL+P +D S++E++EG+SDVE V+G G GGAEGE G
Sbjct: 1 MSFGVQEKSWSDQRECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGGFDFNPITGAQKEVEEKLMPYVADESA-SEVEVLEGDSDVEVVEGQGGGGAEGEVFG 252
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.040e-103 Identity = 159/252 (63.10%), Postives = 187/252 (74.21%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEV 750
MSF VQEKSW D REC WIS SWKLRPNNGSII+Q ILVLDDFKCH+ + FI R NT VI IP G TPLLQP DRMLNK+MKRL+RGKYT Y+ASA+A+ ++ KLKPP RG VST CK+ W +ITPE V CF+ICGLTLAL+GSEDH WC HNFGE YR+LL++Q W A HP+VTLPPL+LPKVP ++PITAA+KE+E KLLP +D + DS++E+ E G G AEGE V
Sbjct: 1 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVSEXXXXXXXXXXQGGGDAEGEVV 251
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 317 bits (811), Expect = 2.890e-103 Identity = 161/252 (63.89%), Postives = 189/252 (75.00%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEV 750
MSF VQEKSW D REC WIS SWKLRPNNGSI++Q P ILVLDDFKCH+D+ FI R NT VI IP LTPLLQP DRMLNK+MKRL+R KYT Y+ASA+A+ ++ KLKPP RG VST CKE W + TPE V CF ICGLTLAL+GSEDH WC HNFGE YR+LL++QR W A H +VTLPPL+LPKVP ++PITAA+KE+E KLLP +D + DS++E++EG G GGAEGE V
Sbjct: 217 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGEVV 467
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 310 bits (794), Expect = 2.640e-102 Identity = 157/252 (62.30%), Postives = 187/252 (74.21%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEV 750
MSF VQEKSW D REC WIS SWKLRPNNGSI++Q P ILVLDD KCH+ + FI R NT VI IP GLTPLLQP DRMLNK+MKRL+RGKYT Y+ SA+A+ ++ KLKPP RG VST CKE W +ITPE V CF+ICGLTLAL+GSEDH WC H+FGE +LL++Q W A HP+VTLPPL+LPKVP ++PITAA+KE+E KLLP +D + DS++E++EG G GGAEG V
Sbjct: 98 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGNVV 348
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 329 bits (843), Expect = 7.730e-102 Identity = 172/303 (56.77%), Postives = 203/303 (67.00%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKY------------------------------------------------TTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEVGDY 759
M FVVQEKSWCDARECTLW+SESW+ RPN+GS+IKQ SILVLDDF+CHR + F+ RRTNTTVILIP GLTPLLQP DRMLNK+MKRL+RG T Y ASAIA+PKT KL+PPGRG VST KE WAAITPE V +CF++CGLTLAL+GSED W THNFGEGYRE+L QQ EW+A HP VTLPPLQLP+V G +PI AEKE+ AKLLPP D D ++E+++G+SDVE +DGP G A G+++ +
Sbjct: 286 MFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEVSSAPGANPIATAEKEVTAKLLPPEGDS--DDEVEIIDGDSDVELLDGPWVGAAGGDDLSTF 586
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 317 bits (811), Expect = 1.600e-101 Identity = 159/240 (66.25%), Postives = 176/240 (73.33%), Query Frame = 1
Query: 13 VQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGD 726
VQEKSWCD REC LWI +SWKLRPNNGSI++Q ILVLDDFKCH+D FI + NT VI IP GLTPLLQP DRMLNK+MKRL+RG YT TA A +PKT L PPGRGAV+T CK WA+ITPE V CF+ICGLTLAL+GSEDH WC HNFG+GYRELL+QQRVEW A HPNVTLP LQLPKVP S + I AA KELEA LLP D SDIE+ + G GD
Sbjct: 371 VQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPAESTANHIEAAAKELEAGLLPCGDD----SDIEIEDXXXXXXXXXGAGD 606
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 300 bits (767), Expect = 2.360e-98 Identity = 146/216 (67.59%), Postives = 170/216 (78.70%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLP 642
MSF VQEKSW D REC W S SWKLRPNNGSI++Q P ILVLDDFKCH+D+ FI R NT VI IP GLTPLLQP D LNK+MKRL+RGK+T Y++SA+A+ ++ KLKPP RG VST CKE W +ITPE V CF+ICGLTLAL+GSEDH WC HNFGE YR+LL++Q W A HPNVTLPPL+LPKVP ++PITAA+KE+E KLLP
Sbjct: 62 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLP 275
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 305 bits (780), Expect = 3.650e-97 Identity = 154/229 (67.25%), Postives = 168/229 (73.36%), Query Frame = 1
Query: 1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIEL 681
MSF VQEKSWCD REC LWI SWKLRPNNGSI++Q ILVLDDFKCH+D FI R NT VI IP GLTPLLQ DRMLNK+MKRL+ PKT KL PPGRGAV+T CK WA+ITPE V CF+ICGLTLAL+GSEDH WC HNFG+GYRELL+QQRVEW A HPNVTLPPLQLPKVP S + I AA KELEA+LLP D SDIE+
Sbjct: 342 MSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAELLPRGDD----SDIEI 566 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig687.17932.1 >prot_F-serratus_M_contig687.17932.1 ID=prot_F-serratus_M_contig687.17932.1|Name=mRNA_F-serratus_M_contig687.17932.1|organism=Fucus serratus male|type=polypeptide|length=255bp MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRback to top mRNA from alignment at F-serratus_M_contig687:347677..348687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig687.17932.1 ID=mRNA_F-serratus_M_contig687.17932.1|Name=mRNA_F-serratus_M_contig687.17932.1|organism=Fucus serratus male|type=mRNA|length=1011bp|location=Sequence derived from alignment at F-serratus_M_contig687:347677..348687- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig687:347677..348687- >mRNA_F-serratus_M_contig687.17932.1 ID=mRNA_F-serratus_M_contig687.17932.1|Name=mRNA_F-serratus_M_contig687.17932.1|organism=Fucus serratus male|type=CDS|length=1530bp|location=Sequence derived from alignment at F-serratus_M_contig687:347677..348687- (Fucus serratus male)back to top |