mRNA_F-serratus_M_contig687.17932.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig687.17932.1
Unique NamemRNA_F-serratus_M_contig687.17932.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 8.980e-106
Identity = 161/229 (70.31%), Postives = 177/229 (77.29%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIEL 681
            MSF VQEKSWCD REC LWI +SWKLRPNNGSI++Q   ILVLDDFKCH+D  FI    R  NT VI IP GLTPLLQP DRMLNK+MKRL+RG YT +TA A  +PKT KL PPGRGAV+T CK  WA+ITPE    CF+ICGLTLAL+GSEDH WC HNFG+GYRELL+QQRVEW A HPNVTLPPLQLPKVP  S  + I AA KELEA LLP   D    SDIE+
Sbjct:  337 MSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAGLLPRGDD----SDIEI 561          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 1.180e-104
Identity = 160/229 (69.87%), Postives = 177/229 (77.29%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIEL 681
            MSF VQEKSWCD RE  LWI +SWKLRPNNGS+++Q   ILVLDDFKCH+D  FI    R  NT VI IP GLTPLLQP DRMLNK+MKRL+RG YT +TA A  +PKT KL PPGRGAV+T CK  WA+ITPE V  CF+ICGLTLAL+GSEDH WC HNFG+GYRELL+QQRVEW A HPNVTLPPLQLPKVP  S  + I AA KELEA LLP   D    SDIE+
Sbjct:  330 MSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAGLLPRGDD----SDIEI 554          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 1.760e-104
Identity = 156/253 (61.66%), Postives = 189/253 (74.70%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEVG 753
            MSF VQEKSW D REC  WIS SWK RPNNGSI++Q P ILVLDDFKC +D+ FI    R  NT  I IP GLTPLLQP DR+LNK+MKR++RGKYT Y+ASA+A+ ++ KLKPP RG VST C E W +I PE V  CF+ICGLTLAL+G EDH W  HNFGE YR+LL++Q   W A HP+ TLPPL+LP+VP     +PIT A+KE+E KL+P  +D    S++E++EG+SDVE V+G G GGAEGE  G
Sbjct:    1 MSFGVQEKSWSDQRECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGGFDFNPITGAQKEVEEKLMPYVADESA-SEVEVLEGDSDVEVVEGQGGGGAEGEVFG 252          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.040e-103
Identity = 159/252 (63.10%), Postives = 187/252 (74.21%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEV 750
            MSF VQEKSW D REC  WIS SWKLRPNNGSII+Q   ILVLDDFKCH+ + FI    R  NT VI IP G TPLLQP DRMLNK+MKRL+RGKYT Y+ASA+A+ ++ KLKPP RG VST CK+ W +ITPE V  CF+ICGLTLAL+GSEDH WC HNFGE YR+LL++Q   W A HP+VTLPPL+LPKVP    ++PITAA+KE+E KLLP  +D + DS++E+ E           G G AEGE V
Sbjct:    1 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVSEXXXXXXXXXXQGGGDAEGEVV 251          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 2.890e-103
Identity = 161/252 (63.89%), Postives = 189/252 (75.00%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEV 750
            MSF VQEKSW D REC  WIS SWKLRPNNGSI++Q P ILVLDDFKCH+D+ FI    R  NT VI IP  LTPLLQP DRMLNK+MKRL+R KYT Y+ASA+A+ ++ KLKPP RG VST CKE W + TPE V  CF ICGLTLAL+GSEDH WC HNFGE YR+LL++QR  W A H +VTLPPL+LPKVP    ++PITAA+KE+E KLLP  +D + DS++E++EG          G GGAEGE V
Sbjct:  217 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGEVV 467          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 2.640e-102
Identity = 157/252 (62.30%), Postives = 187/252 (74.21%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEV 750
            MSF VQEKSW D REC  WIS SWKLRPNNGSI++Q P ILVLDD KCH+ + FI    R  NT VI IP GLTPLLQP DRMLNK+MKRL+RGKYT Y+ SA+A+ ++ KLKPP RG VST CKE W +ITPE V  CF+ICGLTLAL+GSEDH WC H+FGE   +LL++Q   W A HP+VTLPPL+LPKVP    ++PITAA+KE+E KLLP  +D + DS++E++EG          G GGAEG  V
Sbjct:   98 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGNVV 348          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 7.730e-102
Identity = 172/303 (56.77%), Postives = 203/303 (67.00%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKY------------------------------------------------TTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEVGDY 759
            M FVVQEKSWCDARECTLW+SESW+ RPN+GS+IKQ  SILVLDDF+CHR + F+    RRTNTTVILIP GLTPLLQP DRMLNK+MKRL+RG                                                  T Y ASAIA+PKT KL+PPGRG VST  KE WAAITPE V +CF++CGLTLAL+GSED  W THNFGEGYRE+L QQ  EW+A HP VTLPPLQLP+V    G +PI  AEKE+ AKLLPP  D   D ++E+++G+SDVE +DGP  G A G+++  +
Sbjct:  286 MFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEVSSAPGANPIATAEKEVTAKLLPPEGDS--DDEVEIIDGDSDVELLDGPWVGAAGGDDLSTF 586          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 1.600e-101
Identity = 159/240 (66.25%), Postives = 176/240 (73.33%), Query Frame = 1
Query:   13 VQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGD 726
            VQEKSWCD REC LWI +SWKLRPNNGSI++Q   ILVLDDFKCH+D  FI    +  NT VI IP GLTPLLQP DRMLNK+MKRL+RG YT  TA A  +PKT  L PPGRGAV+T CK  WA+ITPE V  CF+ICGLTLAL+GSEDH WC HNFG+GYRELL+QQRVEW A HPNVTLP LQLPKVP  S  + I AA KELEA LLP   D    SDIE+ +         G GD
Sbjct:  371 VQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPAESTANHIEAAAKELEAGLLPCGDD----SDIEIEDXXXXXXXXXGAGD 606          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 2.360e-98
Identity = 146/216 (67.59%), Postives = 170/216 (78.70%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLP 642
            MSF VQEKSW D REC  W S SWKLRPNNGSI++Q P ILVLDDFKCH+D+ FI    R  NT VI IP GLTPLLQP D  LNK+MKRL+RGK+T Y++SA+A+ ++ KLKPP RG VST CKE W +ITPE V  CF+ICGLTLAL+GSEDH WC HNFGE YR+LL++Q   W A HPNVTLPPL+LPKVP    ++PITAA+KE+E KLLP
Sbjct:   62 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLP 275          
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 3.650e-97
Identity = 154/229 (67.25%), Postives = 168/229 (73.36%), Query Frame = 1
Query:    1 MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHRDKDFIPG--RRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTASAIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGSEDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSPITAAEKELEAKLLPPNSDGKIDSDIEL 681
            MSF VQEKSWCD REC LWI  SWKLRPNNGSI++Q   ILVLDDFKCH+D  FI    R  NT VI IP GLTPLLQ  DRMLNK+MKRL+              PKT KL PPGRGAV+T CK  WA+ITPE V  CF+ICGLTLAL+GSEDH WC HNFG+GYRELL+QQRVEW A HPNVTLPPLQLPKVP  S  + I AA KELEA+LLP   D    SDIE+
Sbjct:  342 MSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAELLPRGDD----SDIEI 566          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig687.17932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRZ1_9PHAE8.980e-10670.31DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE1.180e-10469.87DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L8W0_9PHAE1.760e-10461.66DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JBJ7_9PHAE1.040e-10363.10DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE2.890e-10363.89DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KQK9_9PHAE2.640e-10262.30DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE7.730e-10256.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KYG9_9PHAE1.600e-10166.25DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5J8R4_9PHAE2.360e-9867.59DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE3.650e-9767.25DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig687contigF-serratus_M_contig687:347677..348687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.8
Seed ortholog evalue4.5e-34
Seed eggNOG ortholog2880.D7FXD3
Preferred namePOGK
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA binding
EggNOG OGsKOG3105@1,KOG3105@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons2
Model size765
Cds size765
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932099.2912905-CDS-F-serratus_M_contig687:347676..3482701622932099.2912905-CDS-F-serratus_M_contig687:347676..348270Fucus serratus maleCDSF-serratus_M_contig687 347677..348270 -
1690964146.4462397-CDS-F-serratus_M_contig687:347676..3482701690964146.4462397-CDS-F-serratus_M_contig687:347676..348270Fucus serratus maleCDSF-serratus_M_contig687 347677..348270 -
1622932099.3085372-CDS-F-serratus_M_contig687:348516..3486871622932099.3085372-CDS-F-serratus_M_contig687:348516..348687Fucus serratus maleCDSF-serratus_M_contig687 348517..348687 -
1690964146.4610968-CDS-F-serratus_M_contig687:348516..3486871690964146.4610968-CDS-F-serratus_M_contig687:348516..348687Fucus serratus maleCDSF-serratus_M_contig687 348517..348687 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig687.17932.1prot_F-serratus_M_contig687.17932.1Fucus serratus malepolypeptideF-serratus_M_contig687 347677..348687 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig687.17932.1

>prot_F-serratus_M_contig687.17932.1 ID=prot_F-serratus_M_contig687.17932.1|Name=mRNA_F-serratus_M_contig687.17932.1|organism=Fucus serratus male|type=polypeptide|length=255bp
MSFVVQEKSWCDARECTLWISESWKLRPNNGSIIKQCPSILVLDDFKCHR
DKDFIPGRRTNTTVILIPCGLTPLLQPQDRMLNKKMKRLVRGKYTTYTAS
AIANPKTDKLKPPGRGAVSTSCKELWAAITPEAVNICFEICGLTLALNGS
EDHPWCTHNFGEGYRELLQQQRVEWKAAHPNVTLPPLQLPKVPVVSGTSP
ITAAEKELEAKLLPPNSDGKIDSDIELVEGNSDVEPVDGPGDGGAEGEEV
GDYQ*
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mRNA from alignment at F-serratus_M_contig687:347677..348687-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig687.17932.1 ID=mRNA_F-serratus_M_contig687.17932.1|Name=mRNA_F-serratus_M_contig687.17932.1|organism=Fucus serratus male|type=mRNA|length=1011bp|location=Sequence derived from alignment at F-serratus_M_contig687:347677..348687- (Fucus serratus male)
ATGTCTTTCGTCGTGCAGGAAAAAAGCTGGTGTGATGCGCGGGAGTGCAC CCTTTGGATCTCGGAAAGCTGGAAGCTCCGTCCTAACAACGGAAGCATTA TCAAGCAGTGCCCAAGTATTTTGGTATTGGACGACTTCAAGTGCCACCGA GACAAAGATTTCATTCCCGGCGTCAAGAGGAGCGTTTCTACCATAGCCCC CCCCCCCCAAACCGTCGATTGCATAAACCAGAAAATAAAGAATACTCACC GCTACAGGCGGCTAAGTAGAAAAACGAAATTCGTGACAGACTTGTATTTA CAATAATATTTTCATGAACAGGTCGGACCAGTAAAAAAACGAATGAGGGA GAAAAGGCGCGAAATCGGTTTCGAAATCGTCGCTGGCATGGGGGGGCGCT ATCGTAGAAACATTCAGAGGAGGACGAACACCACCGTCATCTTAATCCCA TGTGGGTTGACTCCGCTTCTCCAACCGCAGGATCGCATGCTCAACAAGAA GATGAAGAGGCTAGTGCGGGGTAAGTACACCACCTACACCGCATCGGCGA TCGCAAACCCCAAGACGGACAAGCTGAAACCGCCGGGGCGTGGGGCCGTG TCCACATCGTGCAAGGAGTTATGGGCAGCTATCACTCCCGAGGCGGTCAA TATTTGCTTCGAGATCTGCGGCCTCACACTTGCGCTCAACGGCAGTGAAG ACCACCCCTGGTGCACGCACAACTTCGGGGAAGGTTATCGCGAGCTTCTT CAGCAGCAGCGCGTCGAGTGGAAAGCAGCACACCCCAACGTGACTCTACC GCCGCTCCAGCTACCAAAGGTACCAGTTGTATCCGGCACCAGCCCGATCA CGGCTGCAGAAAAGGAGCTCGAGGCAAAGCTTCTGCCTCCCAACAGCGAT GGGAAGATCGACAGCGATATAGAGCTCGTGGAAGGTAACAGCGATGTAGA GCCCGTGGACGGGCCGGGGGATGGGGGCGCGGAAGGAGAGGAAGTGGGAG ATTACCAGTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig687:347677..348687-

>mRNA_F-serratus_M_contig687.17932.1 ID=mRNA_F-serratus_M_contig687.17932.1|Name=mRNA_F-serratus_M_contig687.17932.1|organism=Fucus serratus male|type=CDS|length=1530bp|location=Sequence derived from alignment at F-serratus_M_contig687:347677..348687- (Fucus serratus male)
ATGTCTTTCGTCGTGCAGGAAAAAAGCTGGTGTGATGCGCGGGAGTGCAC
CCTTTGGATCTCGGAAAGCTGGAAGCTCCGTCCTAACAACGGAAGCATTA
TCAAGCAGTGCCCAAGTATTTTGGTATTGGACGACTTCAAGTGCCACCGA
GACAAAGATTTCATTCCCGGCATGTCTTTCGTCGTGCAGGAAAAAAGCTG
GTGTGATGCGCGGGAGTGCACCCTTTGGATCTCGGAAAGCTGGAAGCTCC
GTCCTAACAACGGAAGCATTATCAAGCAGTGCCCAAGTATTTTGGTATTG
GACGACTTCAAGTGCCACCGAGACAAAGATTTCATTCCCGGCAGGAGGAC
GAACACCACCGTCATCTTAATCCCATGTGGGTTGACTCCGCTTCTCCAAC
CGCAGGATCGCATGCTCAACAAGAAGATGAAGAGGCTAGTGCGGGGTAAG
TACACCACCTACACCGCATCGGCGATCGCAAACCCCAAGACGGACAAGCT
GAAACCGCCGGGGCGTGGGGCCGTGTCCACATCGTGCAAGGAGTTATGGG
CAGCTATCACTCCCGAGGCGGTCAATATTTGCTTCGAGATCTGCGGCCTC
ACACTTGCGCTCAACGGCAGTGAAGACCACCCCTGGTGCACGCACAACTT
CGGGGAAGGTTATCGCGAGCTTCTTCAGCAGCAGCGCGTCGAGTGGAAAG
CAGCACACCCCAACGTGACTCTACCGCCGCTCCAGCTACCAAAGGTACCA
GTTGTATCCGGCACCAGCCCGATCACGGCTGCAGAAAAGGAGCTCGAGGC
AAAGCTTCTGCCTCCCAACAGCGATGGGAAGATCGACAGCGATATAGAGC
TCGTGGAAGGTAACAGCGATGTAGAGCCCGTGGACGGGCCGGGGGATGGG
GGCGCGGAAGGAGAGGAAGTGGGAGATTACCAGTAGAGGAGGACGAACAC
CACCGTCATCTTAATCCCATGTGGGTTGACTCCGCTTCTCCAACCGCAGG
ATCGCATGCTCAACAAGAAGATGAAGAGGCTAGTGCGGGGTAAGTACACC
ACCTACACCGCATCGGCGATCGCAAACCCCAAGACGGACAAGCTGAAACC
GCCGGGGCGTGGGGCCGTGTCCACATCGTGCAAGGAGTTATGGGCAGCTA
TCACTCCCGAGGCGGTCAATATTTGCTTCGAGATCTGCGGCCTCACACTT
GCGCTCAACGGCAGTGAAGACCACCCCTGGTGCACGCACAACTTCGGGGA
AGGTTATCGCGAGCTTCTTCAGCAGCAGCGCGTCGAGTGGAAAGCAGCAC
ACCCCAACGTGACTCTACCGCCGCTCCAGCTACCAAAGGTACCAGTTGTA
TCCGGCACCAGCCCGATCACGGCTGCAGAAAAGGAGCTCGAGGCAAAGCT
TCTGCCTCCCAACAGCGATGGGAAGATCGACAGCGATATAGAGCTCGTGG
AAGGTAACAGCGATGTAGAGCCCGTGGACGGGCCGGGGGATGGGGGCGCG
GAAGGAGAGGAAGTGGGAGATTACCAGTAG
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