mRNA_F-serratus_M_contig6773.17791.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: D8LGK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK7_ECTSI) HSP 1 Score: 222 bits (566), Expect = 2.890e-71 Identity = 104/136 (76.47%), Postives = 120/136 (88.24%), Query Frame = 1
Query: 1 SKRGRSHLAERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVPWPC 408
SKR RS LA+RISNKLHA WVV+G V+ +TDFVRVL+ED+RV+R+WFN+ + CFS+N VILAYLTVWLP+VRGI++SWNVY PRAIPTATVVGLICA+ LN+SLWNVWGFLTPLILFAVF GCLF FVPWPC
Sbjct: 104 SKRRRSQLADRISNKLHAFFWVVVGVAVVYRTDFVRVLVEDERVDRLWFNIGLVCFSVNAVILAYLTVWLPHVRGIRVSWNVYSPRAIPTATVVGLICALALNMSLWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 239
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: A0A836CLB2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB2_9STRA) HSP 1 Score: 193 bits (491), Expect = 5.590e-61 Identity = 86/135 (63.70%), Postives = 106/135 (78.52%), Query Frame = 1
Query: 4 KRGRSHLAERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVPWPC 408
KR R+ LAERISNKLHA W ++ V+ TDFVRVLL+D RV R WFN++ ACF++N VI+ YLT+WLP V+ + WN+YCPRAIP AT VG+IC V+LN++LW+VWGFLTPLIL VF GCLF+ FVPWPC
Sbjct: 25 KRRRTELAERISNKLHAAFWTIVAGVVVYYTDFVRVLLQDDRVKRPWFNLATACFAVNCVIMGYLTLWLPLVQRVSTPWNIYCPRAIPAATAVGVICGVSLNLALWSVWGFLTPLILLVVFMGCLFFLHFVPWPC 159
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: W4FWN3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN3_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.170e-40 Identity = 65/125 (52.00%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 25 AERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVP 399
AE +S K+HAL+W+V +L D +RV D RV+RV+FN+ + CF IN I YL++WLPYV+ I + W+VYCPR +PTATVVG++CA+ V LW VWGF TP ILF +F G L F+P
Sbjct: 53 AEVVSTKIHALMWIVGAGFLLYYLDVLRVAFRDARVHRVYFNIGLVCFGINACITLYLSIWLPYVKKIDLEWSVYCPRMVPTATVVGIVCALMFTVGLWPVWGFFTPGILFVLFLGTLMTAHFLP 177
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: A0A6G0XCK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCK9_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.350e-40 Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 25 AERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVP 399
AE +S K+HA+LW+V +++ D RV D RV+R++FN+ + CF IN I YL VWLPYV+ I + W+VYCPR IPTATVVGL+CA+ L + LW VWGF TP ILF +F G L F+P
Sbjct: 46 AEWVSTKIHAVLWIVGAASLAYFLDVFRVAFRDARVHRIYFNIGLVCFGINCCITMYLAVWLPYVKKIDLEWSVYCPRMIPTATVVGLLCALMLTIGLWPVWGFFTPGILFVLFLGALMTAHFLP 170
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: A0A8J2SGJ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGJ0_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.600e-40 Identity = 70/136 (51.47%), Postives = 86/136 (63.24%), Query Frame = 1
Query: 1 SKRGRSHLAERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVPWPC 408
+K+ RS LAE+++ K+ A WV G V QTD VLL NR W +V+ ACF+ N V+ YLTVWLP+V+ I + WNVYCPR IPT TV+GL C +L LW VWG LTPLIL V CL F+P PC
Sbjct: 23 AKKRRSELAEQVATKIQAAAWVAAGGFVAYQTDLPVVLLAGTETNRFWCDVAAACFAANCVLCFYLTVWLPHVQRIDLEWNVYCPRVIPTMTVLGLTCGFSLIRGLWPVWGLLTPLILGLVAMACLMSLHFIPIPC 158
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: A0A485KKF8_9STRA (Aste57867_8441 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKF8_9STRA) HSP 1 Score: 141 bits (355), Expect = 4.470e-40 Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 25 AERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVP 399
AE IS KLHALLWV+ +++ D RV D RV+RV+FN+ + CF IN I YL VWLPY++ I + W+VYCPR +PTAT VGL+CA+T + LW VWG TP ILF +F G L F+P
Sbjct: 51 AEWISTKLHALLWVLGAGSLVYTLDVFRVAFRDARVHRVYFNIGLVCFGINCCITLYLAVWLPYIKKIDLEWSVYCPRMVPTATAVGLLCALTFTIGLWPVWGLFTPGILFVLFLGSLMTAHFLP 175
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: A0A024UNE8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNE8_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.270e-39 Identity = 64/125 (51.20%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 25 AERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVP 399
AE IS K+HA LW+V +L D + V D RV+RV+FN+ + CF IN I YL +WLPYV+ I + WNVYCPR +PTAT+VG++CA+ + LW VWGF TP ILF +F G L F+P
Sbjct: 51 AEVISTKIHAFLWIVGAGFLLYYLDVMHVAFRDSRVHRVYFNLGLVCFGINTCITLYLAIWLPYVKKIDLEWNVYCPRMVPTATIVGVVCALMFTMGLWPVWGFFTPGILFVLFLGALMTAHFLP 175
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: W7TLQ7_9STRA (Transmembrane protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLQ7_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.770e-37 Identity = 67/135 (49.63%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 1 SKRGRSHLAERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVPWP 405
SKR R+ + ERIS KL A WV+ L T+FV V+L+D+R+NRV+F++++ C IN+ I YLTV+L ++GI I W YCPR IP AT G++CA+ L SLW V+GF PLIL +F G +F F+PWP
Sbjct: 72 SKRERAEIWERISVKLQAGAWVLGMMATLHYTNFVHVVLDDERLNRVYFHLAMICLGINLCIGLYLTVYLQLIKGINIEWATYCPRMIPAATFSGVVCAICLVSSLWPVYGFFAPLILLVIFFGSMFSMHFIPWP 206
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: A0A1W0A176_9STRA (Transmembrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A176_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.470e-36 Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 25 AERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVP 399
AE +S KLHA LW+ + D + V D RV+R++FN+ + CF +N I YL VWLPYV+ I + W+VYCPR IPTAT++G++CA+ + LW VWGF TP ILF +F G L F+P
Sbjct: 39 AEYVSTKLHAALWIGSAVALAYCLDVLNVAFHDPRVHRLYFNIGLVCFGMNCCITLYLAVWLPYVKKIDLEWSVYCPRMIPTATIIGILCALGFILGLWPVWGFFTPGILFVLFLGSLMTAHFLP 163
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Match: A0A067CEE4_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CEE4_SAPPC) HSP 1 Score: 129 bits (325), Expect = 1.270e-35 Identity = 64/125 (51.20%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 25 AERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNVSVACFSINMVILAYLTVWLPYVRGIKISWNVYCPRAIPTATVVGLICAVTLNVSLWNVWGFLTPLILFAVFSGCLFWPAFVP 399
AE +S KLHALLWV + D V + L D RV+R++FN+ V C +N I AYL +WLPYVR + + W+VYCPR IPTAT+VGL+ A+ L + LW VWG TP ILF +F G L F+P
Sbjct: 44 AEWLSTKLHALLWVGGACLLAYYLDVVHIALRDVRVHRLYFNIGVVCAGVNGCITAYLALWLPYVRKVDLEWSVYCPRMIPTATIVGLVGALGLILGLWPVWGLFTPGILFVLFLGTLMTAHFLP 168 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6773.17791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6773.17791.1 >prot_F-serratus_M_contig6773.17791.1 ID=prot_F-serratus_M_contig6773.17791.1|Name=mRNA_F-serratus_M_contig6773.17791.1|organism=Fucus serratus male|type=polypeptide|length=137bp SKRGRSHLAERISNKLHALLWVVIGSTVLVQTDFVRVLLEDKRVNRVWFNback to top mRNA from alignment at F-serratus_M_contig6773:2864..3935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6773.17791.1 ID=mRNA_F-serratus_M_contig6773.17791.1|Name=mRNA_F-serratus_M_contig6773.17791.1|organism=Fucus serratus male|type=mRNA|length=1072bp|location=Sequence derived from alignment at F-serratus_M_contig6773:2864..3935- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6773:2864..3935- >mRNA_F-serratus_M_contig6773.17791.1 ID=mRNA_F-serratus_M_contig6773.17791.1|Name=mRNA_F-serratus_M_contig6773.17791.1|organism=Fucus serratus male|type=CDS|length=822bp|location=Sequence derived from alignment at F-serratus_M_contig6773:2864..3935- (Fucus serratus male)back to top |