mRNA_F-serratus_M_contig629.17135.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig629.17135.1
Unique NamemRNA_F-serratus_M_contig629.17135.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 1.530e-80
Identity = 134/227 (59.03%), Postives = 175/227 (77.09%), Query Frame = 1
Query:   40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEES-REESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLR 717
            KHVS  LL TFL+YSSVS+ +F+ FVC++L+ G +YLRADYTI+CDS KH+A Q+YAG M+++Y VGIPALYA LLF +R VL+D  + RE++      SDLWKPYKP  F+Y+VIECGRR+LL G VVFI+PNTA+Q+A    +A  FV +SE +AP+ S+WDAW +RTGH VVF SMY+ALLLKVDVSGE    Q+++ ++LV  H CM+LA+M +  VL  SL+
Sbjct: 1011 KHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLK 1237          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 4.320e-80
Identity = 149/264 (56.44%), Postives = 182/264 (68.94%), Query Frame = 1
Query:    7 SSETLFQKTRQKHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPRPRRSSSLELRIQPSI 795
            SSE L Q+   KHVS  LL TFLVY+SVS+V+FQ F C++LD  K+YLRADY IECDS KH A Q+YAG MI+LY VGIPALY G LF +  VLR DE  RE+     P +DLWKPY+P  F+Y+VIEC RR+LL G VVFIYPNTA+Q+A A  IAV F  +SEA+APY SRWD W  R GHAVV  SMY+ALLLKVDVS E  S Q++F  +LV  H CMV  ++++ ++ AISL   K    P     R      R++ S+
Sbjct:  722 SSEDL-QRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQPASSSFRRGRGIFRLRGSV 984          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 9.750e-79
Identity = 144/246 (58.54%), Postives = 175/246 (71.14%), Query Frame = 1
Query:   40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEE-SREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLH-DDPRPRPRRSSSL 771
            KHV+  LL TF VYSSVSS +F+ F CD LD  K YLRADY+IEC+S +HR +Q+YAG MI++Y VGIPALYA LLF +R VL+DE+  REE    + IS+LW+PYKP  F+Y+VIEC RR+LL G VVFIYPNTA+Q+A    IA  F  LSE +APY SRWD W SR GH VVF SMY+ALLLKVDVS E  S Q++F  +LV VH CM+L ++V+  V A SLR  +       PR R   SL
Sbjct: 1267 KHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSL 1512          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 2.120e-78
Identity = 137/238 (57.56%), Postives = 169/238 (71.01%), Query Frame = 1
Query:   40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPR 750
            +HVS  LL  FLVYS VSSVVFQ F CD+L+ G  YLRADY IECDS KH+  ++YAG MI+LYPVGIPA Y  LL  +R VL +D + RE+      IS+LW+PY+P  ++Y+VIECGRRILLTG VVFIYPNTA+Q+A    + V F  LSEA+ PY   WD W SR  HAVVF S+Y+ALLLKVDVS E  S QK+F  +LV  H CM+LA++V+ ++L    R  K  D+P PR
Sbjct:  772 RHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR-VKEQDEPAPR 1008          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 3.080e-78
Identity = 138/238 (57.98%), Postives = 171/238 (71.85%), Query Frame = 1
Query:   40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPR 750
            +HVS  LL  F+VYSSVSSVVFQ F CD+L+ G  YLRADY IECDS KH+  ++YAG MI+LYPVGIPA Y  LLF +R VL +D + RE+      IS+LW+PY+P  ++Y+VIECGRRILLTG VVFIYPNTA+Q+A    + V F  LSEA+ PY   WD W SR  HAVVF S+Y+ALLLKVDVS E  S QK+F  +LV  H CM+LA++V+ ++L    R  K  D+P PR
Sbjct: 2510 RHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR-VKEQDEPAPR 2746          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 1.010e-77
Identity = 139/245 (56.73%), Postives = 178/245 (72.65%), Query Frame = 1
Query:   40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPRPRRSSSL 771
            KHV   LL TFLVYSSVSS +F+ F CD+L+ GK+YLR DY IECDS KH+  Q+YAG MI+LYP+GIP LY+ LLF +R VL+ D+  R++S   +  S+LW+PYKP  F+Y+VIECGRRILLTG VVFIYPNTA+Q+A    +A FF  LSEA++PY SRW+ W +R GH VV  SMY+ALLLKVDVS E    Q +F  +LV VH CM+L+++V+  V+A  L + +L +D   R RR   L
Sbjct: 1182 KHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWTRRLREDLPARFRRGKFL 1425          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 2.900e-76
Identity = 140/239 (58.58%), Postives = 172/239 (71.97%), Query Frame = 1
Query:    1 RASSETLFQKTRQKHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISL 714
            R ++ETL Q    +HVS  LL T  VYSSVSS +FQ F C+ L  G++YLRADY I CDS KH+ALQ+YAG+M+++Y VGIPALY  LLF +R VL R    REE+      S+LWKPYKP  F+Y+VIECGRR+LL G VVFIYPNTA Q+A    +A  FV +SE +APY SRWD W SR GHAVVF SMY+ALLLKVDVS E    Q++F V+LV  H CM+L I+++ VVL  +L
Sbjct: 1810 RGATETL-QVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.370e-75
Identity = 137/238 (57.56%), Postives = 170/238 (71.43%), Query Frame = 1
Query:   10 SETLFQKTRQKHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEES--REESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLR 717
            SE   QK R KH+S  LL TFLVYSSVS+ VFQ F C+ LD  K YLRADY IECDS +H+A Q++AG+MI++YPVGIP  Y  LL+ +RRVL+ E++  R+ S   +PISDLW PYKP RF+Y+VIEC RR+ LTG VVFIYPNTA+QVA    IA  FV  S  +APY S+WDA  S  GH +VF SMY ALL KVDVS E    Q++F  +LV  H CMV+A++V+ +V+  S R
Sbjct: 1520 SEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 1.340e-74
Identity = 136/245 (55.51%), Postives = 175/245 (71.43%), Query Frame = 1
Query:   40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPRPRRSSSL 771
            KHV   LL TFLVYSSVSS +F+ F CD+L+ G +YLR DY IECDS KH+  Q+YAG MI+LYP+GIP LY+ LLF +R VL+ D+  R +S   +  S+LW+PYKP  F+Y+VIECGRR+LLTG +VFIYPNTA+Q+A    +A FF  LSEA++PY SRW+ W +R GH VV  S+Y+ALLLKVDVS E    Q +F  +LV VH CM+L+++V+  V+A  L   KL +D   R RR   L
Sbjct: 1242 KHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWRQKLREDVPARFRRGKFL 1484          
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 2.340e-73
Identity = 128/233 (54.94%), Postives = 169/233 (72.53%), Query Frame = 1
Query:   25 QKTRQKHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKS-YLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLR 717
            Q    KHVS  LL TF VYS+VS+++F+ F C++L  G+S YLR+DY IECDS KH+A +I AG MI+LY VGIP LYAGL+F +R +L+ DE  RE++      S LWKPY+P  F+Y+V ECG R+LL G VVFIYP+TA+Q+A    IA  FV +SE ++PY S+WD W +R GH VVF SM++ALLLKVDV+ E+ S QK+F  +LV  H CMVL ++++ +VL  SLR
Sbjct:  449 QSVWNKHVSMVLLLTFFVYSNVSAILFKAFACEQL--GESIYLRSDYRIECDSPKHQAFKINAGFMIVLYTVGIPTLYAGLVFRDRHLLKKDEADREDTPRVTSTSGLWKPYRPSVFYYEVFECGWRVLLAGVVVFIYPDTAAQIAVTLMIAFAFVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVLVVVIEAIVLTSSLR 679          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G301_ECTSI1.530e-8059.03Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2Z8_ECTSI4.320e-8056.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE9.750e-7958.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHH1_ECTSI2.120e-7857.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHG7_ECTSI3.080e-7857.98LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2X5_ECTSI1.010e-7756.73Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G5Y7_ECTSI2.900e-7658.58Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JY65_9PHAE2.370e-7557.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Z1_9PHAE1.340e-7455.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH65_ECTSI2.340e-7354.94Polymorphic outer membrane protein G/I family prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig629contigF-serratus_M_contig629:311784..313136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score252.7
Seed ortholog evalue1.8e-64
Seed eggNOG ortholog2880.D8LHQ8
Hectar predicted targeting categoryother localisation
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1353
Cds size750
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig629.17135.1prot_F-serratus_M_contig629.17135.1Fucus serratus malepolypeptideF-serratus_M_contig629 311892..312641 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931942.6736135-UTR-F-serratus_M_contig629:311783..3118911622931942.6736135-UTR-F-serratus_M_contig629:311783..311891Fucus serratus maleUTRF-serratus_M_contig629 311784..311891 +
1690964068.5285978-UTR-F-serratus_M_contig629:311783..3118911690964068.5285978-UTR-F-serratus_M_contig629:311783..311891Fucus serratus maleUTRF-serratus_M_contig629 311784..311891 +
1622931942.7184048-UTR-F-serratus_M_contig629:312641..3131361622931942.7184048-UTR-F-serratus_M_contig629:312641..313136Fucus serratus maleUTRF-serratus_M_contig629 312642..313136 +
1690964068.5576768-UTR-F-serratus_M_contig629:312641..3131361690964068.5576768-UTR-F-serratus_M_contig629:312641..313136Fucus serratus maleUTRF-serratus_M_contig629 312642..313136 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931942.7043316-CDS-F-serratus_M_contig629:311891..3126411622931942.7043316-CDS-F-serratus_M_contig629:311891..312641Fucus serratus maleCDSF-serratus_M_contig629 311892..312641 +
1690964068.5457625-CDS-F-serratus_M_contig629:311891..3126411690964068.5457625-CDS-F-serratus_M_contig629:311891..312641Fucus serratus maleCDSF-serratus_M_contig629 311892..312641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig629.17135.1

>prot_F-serratus_M_contig629.17135.1 ID=prot_F-serratus_M_contig629.17135.1|Name=mRNA_F-serratus_M_contig629.17135.1|organism=Fucus serratus male|type=polypeptide|length=250bp
MFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYA
GLLFSNRRVLRDEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILL
TGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAV
VFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAI
SLRSTKLHDDPRPRPRRSSSLELRIQPSIVEGDAGKEGSPAENKLELEV*
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mRNA from alignment at F-serratus_M_contig629:311784..313136+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig629.17135.1 ID=mRNA_F-serratus_M_contig629.17135.1|Name=mRNA_F-serratus_M_contig629.17135.1|organism=Fucus serratus male|type=mRNA|length=1353bp|location=Sequence derived from alignment at F-serratus_M_contig629:311784..313136+ (Fucus serratus male)
CGTGCGTCTTCGGAAACGCTTTTCCAAAAAACACGGCAAAAACACGTGTC GGCAGCGCTGCTGACTACATTCTTGGTGTACTCGAGCGTCAGCTCTGTTG TGTTTCAGATGTTCGTTTGCGACAAGCTCGACACCGGGAAGAGCTATCTT CGGGCGGACTACACCATTGAGTGTGACTCCGAAAAACACAGAGCGCTGCA GATTTATGCCGGCCTTATGATCATTTTATACCCAGTGGGGATACCGGCCT TGTACGCTGGCTTGTTGTTCAGCAATCGCCGTGTTTTGAGGGACGAGGAG AGTCGGGAAGAATCCCATTTTGCCAGACCTATTTCGGATCTATGGAAGCC GTACAAGCCTCAAAGGTTCTTCTATGACGTGATTGAATGCGGCCGTCGAA TCTTACTTACTGGTGCTGTGGTATTCATCTATCCTAACACCGCATCTCAG GTCGCTGCTGCTTTCGCGATCGCAGTTTTCTTCGTGTTTTTGTCAGAGGC TATGGCCCCGTACAAGTCACGTTGGGACGCTTGGACCAGTCGAACTGGAC ATGCTGTCGTTTTCGCTAGCATGTACCTTGCTTTGTTGCTGAAGGTGGAT GTCTCAGGCGAGAATCACTCAAGACAGAAAATGTTTGGGGTCATCCTTGT AGGTGTTCACGGGTGCATGGTTCTTGCAATTATGGTGCAGGGCGTGGTCT TGGCAATATCGCTGAGGTCGACAAAGCTTCATGATGATCCCAGGCCTAGG CCTCGGCGTTCGTCGAGTTTGGAGTTGAGAATTCAGCCATCGATTGTTGA AGGCGATGCAGGCAAAGAAGGCAGCCCTGCCGAAAATAAACTTGAGTTGG AAGTATAGCGTTGACGTTCCAATGAGCAGGTACTGCCACGACTTTGACAA GAATACAGTATTGCTTTAGTCCTCGGAAGTCATATCGAGTTGGACGCCTA ACAGTAGTGTACTCCGTACGAATCTCGGGAAGTGTGCGCCCATTCCCCTC TACCAAAATACTTCGTCATGAGTTCACTCTTACTTTCATTGGAATTTCTT ATCTGCTTGCTTTGCATTCTATCGGTTGGCAAACCTATGTATACGCCAAC GAGAATGGCGTTGTAATCAGGGACTGACACTCTTTATACCAGCCCCGTAC CGCATGGAAAGGCTCTCCCTTGTATTCAAGCTCCTGTCACCGTTATGACT CGATTGTATTTTGTACGGTGTAGGTGACATGAATCCTGGTATGCCTCCCT GTAGCCTCAACCCGTATCGTTCAGTACAGTGCTATATTTGGGACGCTTTG TGGTTGATCCAGAACAACGTTTCCGCTGTTTGCTCAACAACTGTCCTTCT CTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig629:311784..313136+

>mRNA_F-serratus_M_contig629.17135.1 ID=mRNA_F-serratus_M_contig629.17135.1|Name=mRNA_F-serratus_M_contig629.17135.1|organism=Fucus serratus male|type=CDS|length=1500bp|location=Sequence derived from alignment at F-serratus_M_contig629:311784..313136+ (Fucus serratus male)
ATGTTCGTTTGCGACAAGCTCGACACCGGGAAGAGCTATCTTCGGGCGGA
CTACACCATTGAGTGTGACTCCGAAAAACACAGAGCGCTGCAGATTTATG
CCGGCCTTATGATCATTTTATACCCAGTGGGGATACCGGCCTTGTACGCT
GGCTTGTTGTTCAGCAATCGCCGTGTTTTGAGGGACGAGGAGAGTCGGGA
AGAATCCCATTTTGCCAGACCTATTTCGGATCTATGGAAGCCGTACAAGC
CTCAAAGGTTCTTCTATGACGTGATTGAATGCGGCCGTCGAATCTTACTT
ACTGGTGCTGTGGTATTCATCTATCCTAACACCGCATCTCAGGTCGCTGC
TGCTTTCGCGATCGCAGTTTTCTTCGTGTTTTTGTCAGAGGCTATGGCCC
CGTACAAGTCACGTTGGGACGCTTGGACCAGTCGAACTGGACATGCTGTC
GTTTTCGCTAGCATGTACCTTGCTTTGTTGCTGAAGGTGGATGTCTCAGG
CGAGAATCACTCAAGACAGAAAATGTTTGGGGTCATCCTTGTAGGTGTTC
ACGGGTGCATGGTTCTTGCAATTATGGTGCAGGGCGTGGTCTTGGCAATA
TCGCTGAGGTCGACAAAGCTTCATGATGATCCCAGGCCTAGGCCTCGGCG
TTCGTCGAGTTTGGAGTTGAGAATTCAGCCATCGATTGTTGAAGGCGATG
CAGGCAAAGAAGGCAGCCCTGCCGAAAATAAACTTGAGTTGGAAGTATAG
ATGTTCGTTTGCGACAAGCTCGACACCGGGAAGAGCTATCTTCGGGCGGA
CTACACCATTGAGTGTGACTCCGAAAAACACAGAGCGCTGCAGATTTATG
CCGGCCTTATGATCATTTTATACCCAGTGGGGATACCGGCCTTGTACGCT
GGCTTGTTGTTCAGCAATCGCCGTGTTTTGAGGGACGAGGAGAGTCGGGA
AGAATCCCATTTTGCCAGACCTATTTCGGATCTATGGAAGCCGTACAAGC
CTCAAAGGTTCTTCTATGACGTGATTGAATGCGGCCGTCGAATCTTACTT
ACTGGTGCTGTGGTATTCATCTATCCTAACACCGCATCTCAGGTCGCTGC
TGCTTTCGCGATCGCAGTTTTCTTCGTGTTTTTGTCAGAGGCTATGGCCC
CGTACAAGTCACGTTGGGACGCTTGGACCAGTCGAACTGGACATGCTGTC
GTTTTCGCTAGCATGTACCTTGCTTTGTTGCTGAAGGTGGATGTCTCAGG
CGAGAATCACTCAAGACAGAAAATGTTTGGGGTCATCCTTGTAGGTGTTC
ACGGGTGCATGGTTCTTGCAATTATGGTGCAGGGCGTGGTCTTGGCAATA
TCGCTGAGGTCGACAAAGCTTCATGATGATCCCAGGCCTAGGCCTCGGCG
TTCGTCGAGTTTGGAGTTGAGAATTCAGCCATCGATTGTTGAAGGCGATG
CAGGCAAAGAAGGCAGCCCTGCCGAAAATAAACTTGAGTTGGAAGTATAG
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