mRNA_F-serratus_M_contig629.17135.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 281 bits (718), Expect = 1.530e-80 Identity = 134/227 (59.03%), Postives = 175/227 (77.09%), Query Frame = 1
Query: 40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEES-REESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLR 717
KHVS LL TFL+YSSVS+ +F+ FVC++L+ G +YLRADYTI+CDS KH+A Q+YAG M+++Y VGIPALYA LLF +R VL+D + RE++ SDLWKPYKP F+Y+VIECGRR+LL G VVFI+PNTA+Q+A +A FV +SE +AP+ S+WDAW +RTGH VVF SMY+ALLLKVDVSGE Q+++ ++LV H CM+LA+M + VL SL+
Sbjct: 1011 KHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLK 1237
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 277 bits (709), Expect = 4.320e-80 Identity = 149/264 (56.44%), Postives = 182/264 (68.94%), Query Frame = 1
Query: 7 SSETLFQKTRQKHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPRPRRSSSLELRIQPSI 795
SSE L Q+ KHVS LL TFLVY+SVS+V+FQ F C++LD K+YLRADY IECDS KH A Q+YAG MI+LY VGIPALY G LF + VLR DE RE+ P +DLWKPY+P F+Y+VIEC RR+LL G VVFIYPNTA+Q+A A IAV F +SEA+APY SRWD W R GHAVV SMY+ALLLKVDVS E S Q++F +LV H CMV ++++ ++ AISL K P R R++ S+
Sbjct: 722 SSEDL-QRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQPASSSFRRGRGIFRLRGSV 984
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 276 bits (707), Expect = 9.750e-79 Identity = 144/246 (58.54%), Postives = 175/246 (71.14%), Query Frame = 1
Query: 40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEE-SREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLH-DDPRPRPRRSSSL 771
KHV+ LL TF VYSSVSS +F+ F CD LD K YLRADY+IEC+S +HR +Q+YAG MI++Y VGIPALYA LLF +R VL+DE+ REE + IS+LW+PYKP F+Y+VIEC RR+LL G VVFIYPNTA+Q+A IA F LSE +APY SRWD W SR GH VVF SMY+ALLLKVDVS E S Q++F +LV VH CM+L ++V+ V A SLR + PR R SL
Sbjct: 1267 KHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSL 1512
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 273 bits (697), Expect = 2.120e-78 Identity = 137/238 (57.56%), Postives = 169/238 (71.01%), Query Frame = 1
Query: 40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPR 750
+HVS LL FLVYS VSSVVFQ F CD+L+ G YLRADY IECDS KH+ ++YAG MI+LYPVGIPA Y LL +R VL +D + RE+ IS+LW+PY+P ++Y+VIECGRRILLTG VVFIYPNTA+Q+A + V F LSEA+ PY WD W SR HAVVF S+Y+ALLLKVDVS E S QK+F +LV H CM+LA++V+ ++L R K D+P PR
Sbjct: 772 RHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR-VKEQDEPAPR 1008
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI) HSP 1 Score: 275 bits (704), Expect = 3.080e-78 Identity = 138/238 (57.98%), Postives = 171/238 (71.85%), Query Frame = 1
Query: 40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPR 750
+HVS LL F+VYSSVSSVVFQ F CD+L+ G YLRADY IECDS KH+ ++YAG MI+LYPVGIPA Y LLF +R VL +D + RE+ IS+LW+PY+P ++Y+VIECGRRILLTG VVFIYPNTA+Q+A + V F LSEA+ PY WD W SR HAVVF S+Y+ALLLKVDVS E S QK+F +LV H CM+LA++V+ ++L R K D+P PR
Sbjct: 2510 RHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR-VKEQDEPAPR 2746
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 273 bits (699), Expect = 1.010e-77 Identity = 139/245 (56.73%), Postives = 178/245 (72.65%), Query Frame = 1
Query: 40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPRPRRSSSL 771
KHV LL TFLVYSSVSS +F+ F CD+L+ GK+YLR DY IECDS KH+ Q+YAG MI+LYP+GIP LY+ LLF +R VL+ D+ R++S + S+LW+PYKP F+Y+VIECGRRILLTG VVFIYPNTA+Q+A +A FF LSEA++PY SRW+ W +R GH VV SMY+ALLLKVDVS E Q +F +LV VH CM+L+++V+ V+A L + +L +D R RR L
Sbjct: 1182 KHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWTRRLREDLPARFRRGKFL 1425
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 270 bits (689), Expect = 2.900e-76 Identity = 140/239 (58.58%), Postives = 172/239 (71.97%), Query Frame = 1
Query: 1 RASSETLFQKTRQKHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISL 714
R ++ETL Q +HVS LL T VYSSVSS +FQ F C+ L G++YLRADY I CDS KH+ALQ+YAG+M+++Y VGIPALY LLF +R VL R REE+ S+LWKPYKP F+Y+VIECGRR+LL G VVFIYPNTA Q+A +A FV +SE +APY SRWD W SR GHAVVF SMY+ALLLKVDVS E Q++F V+LV H CM+L I+++ VVL +L
Sbjct: 1810 RGATETL-QVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 267 bits (682), Expect = 2.370e-75 Identity = 137/238 (57.56%), Postives = 170/238 (71.43%), Query Frame = 1
Query: 10 SETLFQKTRQKHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEES--REESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLR 717
SE QK R KH+S LL TFLVYSSVS+ VFQ F C+ LD K YLRADY IECDS +H+A Q++AG+MI++YPVGIP Y LL+ +RRVL+ E++ R+ S +PISDLW PYKP RF+Y+VIEC RR+ LTG VVFIYPNTA+QVA IA FV S +APY S+WDA S GH +VF SMY ALL KVDVS E Q++F +LV H CMV+A++V+ +V+ S R
Sbjct: 1520 SEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 265 bits (676), Expect = 1.340e-74 Identity = 136/245 (55.51%), Postives = 175/245 (71.43%), Query Frame = 1
Query: 40 KHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLRSTKLHDDPRPRPRRSSSL 771
KHV LL TFLVYSSVSS +F+ F CD+L+ G +YLR DY IECDS KH+ Q+YAG MI+LYP+GIP LY+ LLF +R VL+ D+ R +S + S+LW+PYKP F+Y+VIECGRR+LLTG +VFIYPNTA+Q+A +A FF LSEA++PY SRW+ W +R GH VV S+Y+ALLLKVDVS E Q +F +LV VH CM+L+++V+ V+A L KL +D R RR L
Sbjct: 1242 KHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWRQKLREDVPARFRRGKFL 1484
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI) HSP 1 Score: 253 bits (645), Expect = 2.340e-73 Identity = 128/233 (54.94%), Postives = 169/233 (72.53%), Query Frame = 1
Query: 25 QKTRQKHVSAALLTTFLVYSSVSSVVFQMFVCDKLDTGKS-YLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEESREESHFARPISDLWKPYKPQRFFYDVIECGRRILLTGAVVFIYPNTASQVAAAFAIAVFFVFLSEAMAPYKSRWDAWTSRTGHAVVFASMYLALLLKVDVSGENHSRQKMFGVILVGVHGCMVLAIMVQGVVLAISLR 717
Q KHVS LL TF VYS+VS+++F+ F C++L G+S YLR+DY IECDS KH+A +I AG MI+LY VGIP LYAGL+F +R +L+ DE RE++ S LWKPY+P F+Y+V ECG R+LL G VVFIYP+TA+Q+A IA FV +SE ++PY S+WD W +R GH VVF SM++ALLLKVDV+ E+ S QK+F +LV H CMVL ++++ +VL SLR
Sbjct: 449 QSVWNKHVSMVLLLTFFVYSNVSAILFKAFACEQL--GESIYLRSDYRIECDSPKHQAFKINAGFMIVLYTVGIPTLYAGLVFRDRHLLKKDEADREDTPRVTSTSGLWKPYRPSVFYYEVFECGWRVLLAGVVVFIYPDTAAQIAVTLMIAFAFVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVLVVVIEAIVLTSSLR 679 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig629.17135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig629.17135.1 >prot_F-serratus_M_contig629.17135.1 ID=prot_F-serratus_M_contig629.17135.1|Name=mRNA_F-serratus_M_contig629.17135.1|organism=Fucus serratus male|type=polypeptide|length=250bp MFVCDKLDTGKSYLRADYTIECDSEKHRALQIYAGLMIILYPVGIPALYAback to top mRNA from alignment at F-serratus_M_contig629:311784..313136+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig629.17135.1 ID=mRNA_F-serratus_M_contig629.17135.1|Name=mRNA_F-serratus_M_contig629.17135.1|organism=Fucus serratus male|type=mRNA|length=1353bp|location=Sequence derived from alignment at F-serratus_M_contig629:311784..313136+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig629:311784..313136+ >mRNA_F-serratus_M_contig629.17135.1 ID=mRNA_F-serratus_M_contig629.17135.1|Name=mRNA_F-serratus_M_contig629.17135.1|organism=Fucus serratus male|type=CDS|length=1500bp|location=Sequence derived from alignment at F-serratus_M_contig629:311784..313136+ (Fucus serratus male)back to top |