mRNA_F-serratus_M_contig62.17025.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig62.17025.1
Unique NamemRNA_F-serratus_M_contig62.17025.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 1.410e-116
Identity = 183/241 (75.93%), Postives = 206/241 (85.48%), Query Frame = 2
Query:    2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTS-TKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVKNKL 721
            DSEHIARKLGL+I  L LFIL FVWLSI   DV+ LSVTFASFLIA SFMIGTAA NL+TAVLFIF+ R YDVGDRVHIY+D QT+  +P ++ V KV+L TT F+RWDEQ+FY+PNHLLA KTIVNIQRTAHQWHEFYI++AA T S K++TLH  LQ FAK KDKPEGLYPRMGFSLT IEDS RL+IRI FRQRGNWQ MEKKWACQSMCTWAIKN CD+IGI+Y LPEVP+ +KNK+
Sbjct:  925 DSEHIARKLGLIIFWLILFILAFVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMTAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAKKKDKPEGLYPRMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVVMKNKM 1165          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 6.410e-115
Identity = 181/240 (75.42%), Postives = 205/240 (85.42%), Query Frame = 2
Query:    2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTS-TKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVKNK 718
            DSEHIA+KLGL+IM + LFIL FVWLSIW ADVV LSVTFASFLIA SFMIGTAA NL++AVLFIF+ R YDVGDRVHIY+ + T   +PT++TVVKV+L+TTVFKRWDEQVFY+PNHLLA+KTIVNIQRTAHQWHEF I +AA T   K+  L T LQ F+KSKDKPEGLY RMGFSL  IEDS +L IRITFRQRGNWQ MEKKWACQSMCTWAIK+ CDS+ ISY LPEVP+++K K
Sbjct:  892 DSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKK 1131          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: D7FX36_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX36_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 2.310e-105
Identity = 165/219 (75.34%), Postives = 189/219 (86.30%), Query Frame = 2
Query:   68 FVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTS-TKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVKNKL 721
            FVWLSI   DV+ LSVTFASFLIA SFMIGTAA NL++AVLFIF+ R YDVGDRVHIY+D QT+  +P ++ VVKV+L TT F+RWDEQ+FY+PNHLLA KTIVNIQRTAHQWHEFYI++AA T S K++TLH  LQ FAK KDKPEGL+PRMGFSLT IEDS RL+IRI FRQRGNWQ M+KKWACQSMCTWAIKN CD+IGI+Y LPEVPI +KNK+
Sbjct:  806 FVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVVKVDLRTTSFRRWDEQIFYIPNHLLADKTIVNIQRTAHQWHEFYIHVAATTSSQKLETLHDALQKFAKKKDKPEGLHPRMGFSLTGIEDSTRLSIRIIFRQRGNWQNMDKKWACQSMCTWAIKNACDTIGITYYLPEVPIVMKNKI 1024          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A6H5JDS1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 3.250e-80
Identity = 151/249 (60.64%), Postives = 172/249 (69.08%), Query Frame = 2
Query:    2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQT-STKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQ---------RMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVKNK 718
            DSEHIA+KLGL+IM + LFIL FVWLSIW ADVV LSVTFASFLIA SFMIGTAA NL++AVLFIF+ R YDVGDRVHIY+ + T   +PT++TVVKV+L+TTVFKRWDEQ         AS                                   LQ F+KSKDKPEGLYPRMGFSL  IEDS +L IRITFRQRGNWQ          MEKKWACQSMCTWAIK+ CDS+ ISY LPE+P+++K K
Sbjct:  940 DSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTRGEEPTNVTVVKVDLMTTVFKRWDEQ---------AS-----------------------------------LQEFSKSKDKPEGLYPRMGFSLVRIEDSTKLTIRITFRQRGNWQVGQEAIVVVNMEKKWACQSMCTWAIKSACDSLNISYFLPEIPVQMKEK 1144          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A835YNP7_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP7_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.120e-71
Identity = 111/243 (45.68%), Postives = 170/243 (69.96%), Query Frame = 2
Query:    2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRV-HIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRV-KNKLY 724
            DS+ +A KLG ++    L  L+F+WL I+  D+  L++TFAS L+ +S +IG A+ NL  +++FIF++R +DVGDRV H + D +   +  +  V +++LL T F+ WDE+V+YLPNH+LA++ I+NIQR+  QWHEF+I + A+TPS K+  L      FA+  +KP G++P + F+LT +E++NRL IR+ FRQ+GNWQ + +KWA QSMCT  I N C  +GI+Y+ P++P+   K KL+
Sbjct:   41 DSQRMAHKLGEVLGAGILIALIFIWLRIFGRDIFALTLTFASVLVGVSVLIGPASANLFASIVFIFVQRPFDVGDRVFHWFPDGRGEMQ--NAVVTRIDLLITCFRAWDEKVYYLPNHVLATRPIINIQRSGDQWHEFFIQVLASTPSQKLWELKAKCVEFAEKHNKPSGIHPHIQFALTGVENTNRLTIRVCFRQKGNWQILSRKWAVQSMCTNCIVNSCKELGITYTQPQLPLDFNKQKLF 281          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A835Z0M4_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.640e-47
Identity = 90/230 (39.13%), Postives = 147/230 (63.91%), Query Frame = 2
Query:    2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLP 691
            DS+ +  KLG +I  L  F+++F+WLSIW    + +S+TF+SFL++ +FM G+ A  LV +++F+F+   YDVGDR+ I +  QTS +     VVK+NLLTTVF+R D Q   +PN LL+   ++N+QR+ + W EF + ++A TP  K+ +L   +Q FA   +   G+Y ++GF+ T I+DS +L +RI  + R NW  ++++W   +    AI + C  +GI+++ P
Sbjct:  735 DSQQMVNKLGQIIGALMSFVMIFIWLSIWGYQFLSISITFSSFLLSFTFMFGSTATALVESIIFVFVTSAYDVGDRLMIPDIMQTS-RYHGCKVVKINLLTTVFERGDGQSLIMPNKLLSQMALINLQRSGNMWFEFVVGVSATTPLHKLHSLKGRMQKFAN--EDSSGIYHKIGFTFTEIQDSAKLVVRINVQGRFNWGDVKRRWEVHNATCQAIAHHCAELGITFTPP 961          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A0L0H4I0_SPIPD (EF-hand domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H4I0_SPIPD)

HSP 1 Score: 125 bits (314), Expect = 1.080e-28
Identity = 77/230 (33.48%), Postives = 122/230 (53.04%), Query Frame = 2
Query:    2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLP 691
            D      KL      +T F+   + L I+   +  + + F SF++A+SF+ GTAAR    ++LF+F+   YD GDRV I N         +L V +V +LTTVFKR D Q+ Y PN L+ASK I N++R+  Q     + +  +TP  K++ L   +  F KS+  P          ++ IE+ N+L + +  + +GNWQ   K+W  ++M  +A+K     +GI Y+ P
Sbjct:  683 DLSQALGKLNTFFYFVTSFVTFCIALPIFGISLTAM-LPFTSFILALSFVFGTAARTAFESLLFLFLTHPYDAGDRVVIDNQ--------NLLVEEVGVLTTVFKRLDGQLIYAPNTLVASKLIHNLRRSGDQSESIELQLNFDTPEEKLRALKERMIDFVKSE--PREFQGVCDIHISEIENLNKLKVNVILKHKGNWQDGSKRWNRRTMFMFALKKNLLELGIRYATP 901          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A058ZGC3_FONAL (EF-hand domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZGC3_FONAL)

HSP 1 Score: 124 bits (312), Expect = 2.340e-28
Identity = 70/225 (31.11%), Postives = 122/225 (54.22%), Query Frame = 2
Query:    2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGI 676
            DS  +   L   +  + L  L+F +L I+  ++    V  AS ++++SF+ G +A+ +   V+++F+   YDVGDRV I +         +  V ++N+  TVF+RWDEQ F++PNH+L  K ++NI+R+ +Q H FY+ + A+T S ++ TL   +Q + +S+  PE     + F L  ++   R+ + IT  Q  NWQ    +W  ++         C  +GI
Sbjct: 2051 DSGTMVNTLDRFVSLMLLVCLLFAFLLIFGTNIESTVVPVASLIVSMSFIFGHSAQRMFDNVIYLFVEHPYDVGDRVFIDDH--------NFIVARMNITATVFRRWDEQYFWIPNHILTDKVVINIRRSGNQRHTFYMFLDADTTSEQLGTLRGMMQGWVESQ--PERFARDVDFILFDVDTHGRMQMLITIGQLSNWQDGAVRWKNRTDSWLFFLQSCRELGI 2265          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A507E7B5_9FUNG (EF-hand domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E7B5_9FUNG)

HSP 1 Score: 120 bits (300), Expect = 8.070e-27
Identity = 70/191 (36.65%), Postives = 107/191 (56.02%), Query Frame = 2
Query:  119 FASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLP 691
            F SF++A+SF+ GTAAR    ++LF+F+   YD GDRV I  D+Q      +L V +V +LTTVFKR D Q+ Y PN L+A+K I N++R+  Q     I +   TP  K++ L   L  + KS+  P          +  IE+ N+L + +  + +GNWQ   K+W  ++M  +A+K+    + I Y  P
Sbjct:  850 FTSFILALSFVFGTAARTAFESLLFLFVTHPYDAGDRVVI--DSQ------NLLVEEVGVLTTVFKRMDGQLIYAPNTLVATKLIHNLRRSGDQSECIEIQLDFTTPEEKLRQLRERLVDYVKSE--PREFVGACDVHIADIENVNKLKLNVILKHKGNWQDGSKRWGRRTMFMYALKHHLTELEIRYLTP 1030          
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.080e-26
Identity = 73/241 (30.29%), Postives = 128/241 (53.11%), Query Frame = 2
Query:    2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYP----RMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVK 712
            D E I  KLG +I  +  FI +FV+L I+  +++ L VT+ S ++A SF+ G++A N   + +FIF+ R YDVGDRV+I ++        +  V ++N+LTTVF+RWD+    LPN  LA + I N++R+        + ++  TP  K++ L   +Q +A++   P  LY      + +    +     + +   + Q+G+WQ    K     + +  +   C  +G+ Y+LP   + +K
Sbjct:  898 DYESILIKLGYVISLVWSFIALFVFLWIFDQNILGLGVTWVSLVVAFSFLFGSSAANFFESCVFIFVTRAYDVGDRVYIKDELNDEA---NYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKERMQEYARAVTGP--LYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQGVTLK 1133          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBC1_9PHAE1.410e-11675.93EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FX37_ECTSI6.410e-11575.42Small Conductance Mechanosensitive Ion channel n=1... [more]
D7FX36_ECTSI2.310e-10575.34Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A6H5JDS1_9PHAE3.250e-8060.64EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNP7_9STRA1.120e-7145.68Mechanosensitive ion channel-domain-containing pro... [more]
A0A835Z0M4_9STRA1.640e-4739.13Mechanosensitive ion channel-domain-containing pro... [more]
A0A0L0H4I0_SPIPD1.080e-2833.48EF-hand domain-containing protein n=2 Tax=Spizello... [more]
A0A058ZGC3_FONAL2.340e-2831.11EF-hand domain-containing protein n=1 Tax=Fonticul... [more]
A0A507E7B5_9FUNG8.070e-2736.65EF-hand domain-containing protein n=1 Tax=Powellom... [more]
A0A835YNU8_9STRA2.080e-2630.29Mechanosensitive ion channel-domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig62contigF-serratus_M_contig62:822879..826280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.0
Seed ortholog evalue2.1e-91
Seed eggNOG ortholog2880.D7FX37
KEGG koko:K02575,ko:K22048
KEGG TC1.A.23.4,2.A.1.8
KEGG Pathwayko00910,map00910
KEGG ModuleM00615
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.mechanosensitive ion channel activity
EggNOG OGsCOG0668@1,KOG4629@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000
Exons6
Model size845
Cds size687
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig62.17025.1prot_F-serratus_M_contig62.17025.1Fucus serratus malepolypeptideF-serratus_M_contig62 822919..826162 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931921.7655592-UTR-F-serratus_M_contig62:822878..8229181622931921.7655592-UTR-F-serratus_M_contig62:822878..822918Fucus serratus maleUTRF-serratus_M_contig62 822879..822918 +
1690964058.6382666-UTR-F-serratus_M_contig62:822878..8229181690964058.6382666-UTR-F-serratus_M_contig62:822878..822918Fucus serratus maleUTRF-serratus_M_contig62 822879..822918 +
1622931921.9888473-UTR-F-serratus_M_contig62:826162..8262801622931921.9888473-UTR-F-serratus_M_contig62:826162..826280Fucus serratus maleUTRF-serratus_M_contig62 826163..826280 +
1690964058.7269444-UTR-F-serratus_M_contig62:826162..8262801690964058.7269444-UTR-F-serratus_M_contig62:826162..826280Fucus serratus maleUTRF-serratus_M_contig62 826163..826280 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931921.8361895-CDS-F-serratus_M_contig62:822918..8229451622931921.8361895-CDS-F-serratus_M_contig62:822918..822945Fucus serratus maleCDSF-serratus_M_contig62 822919..822945 +
1690964058.6552682-CDS-F-serratus_M_contig62:822918..8229451690964058.6552682-CDS-F-serratus_M_contig62:822918..822945Fucus serratus maleCDSF-serratus_M_contig62 822919..822945 +
1622931921.8615117-CDS-F-serratus_M_contig62:823718..8239821622931921.8615117-CDS-F-serratus_M_contig62:823718..823982Fucus serratus maleCDSF-serratus_M_contig62 823719..823982 +
1690964058.665948-CDS-F-serratus_M_contig62:823718..8239821690964058.665948-CDS-F-serratus_M_contig62:823718..823982Fucus serratus maleCDSF-serratus_M_contig62 823719..823982 +
1622931921.8820322-CDS-F-serratus_M_contig62:824379..8244691622931921.8820322-CDS-F-serratus_M_contig62:824379..824469Fucus serratus maleCDSF-serratus_M_contig62 824380..824469 +
1690964058.6816847-CDS-F-serratus_M_contig62:824379..8244691690964058.6816847-CDS-F-serratus_M_contig62:824379..824469Fucus serratus maleCDSF-serratus_M_contig62 824380..824469 +
1622931921.9141064-CDS-F-serratus_M_contig62:824908..8249931622931921.9141064-CDS-F-serratus_M_contig62:824908..824993Fucus serratus maleCDSF-serratus_M_contig62 824909..824993 +
1690964058.6920285-CDS-F-serratus_M_contig62:824908..8249931690964058.6920285-CDS-F-serratus_M_contig62:824908..824993Fucus serratus maleCDSF-serratus_M_contig62 824909..824993 +
1622931921.9416983-CDS-F-serratus_M_contig62:825402..8254971622931921.9416983-CDS-F-serratus_M_contig62:825402..825497Fucus serratus maleCDSF-serratus_M_contig62 825403..825497 +
1690964058.703632-CDS-F-serratus_M_contig62:825402..8254971690964058.703632-CDS-F-serratus_M_contig62:825402..825497Fucus serratus maleCDSF-serratus_M_contig62 825403..825497 +
1622931921.967011-CDS-F-serratus_M_contig62:826036..8261621622931921.967011-CDS-F-serratus_M_contig62:826036..826162Fucus serratus maleCDSF-serratus_M_contig62 826037..826162 +
1690964058.7148352-CDS-F-serratus_M_contig62:826036..8261621690964058.7148352-CDS-F-serratus_M_contig62:826036..826162Fucus serratus maleCDSF-serratus_M_contig62 826037..826162 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig62.17025.1

>prot_F-serratus_M_contig62.17025.1 ID=prot_F-serratus_M_contig62.17025.1|Name=mRNA_F-serratus_M_contig62.17025.1|organism=Fucus serratus male|type=polypeptide|length=229bp
MTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVL
FIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFY
LPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKS
KDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCT
WAIKNGCDSIGISYSLPEVPIRVKNKLY*
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mRNA from alignment at F-serratus_M_contig62:822879..826280+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig62.17025.1 ID=mRNA_F-serratus_M_contig62.17025.1|Name=mRNA_F-serratus_M_contig62.17025.1|organism=Fucus serratus male|type=mRNA|length=3402bp|location=Sequence derived from alignment at F-serratus_M_contig62:822879..826280+ (Fucus serratus male)
GGATAGCGAGCATATCGCGCGGAAGCTCGGTCTTCTGATCATGACGCTTA CCTTATTCATACTCGTCGTAAGTAAAATGACCCGCCCCTCTCCCCTTGAC CCCGTCAAGCCACCATTACGTTACTCTCCACCGCAGGGGCAATCTCTATC CCTCGTGTAACCGTTCAACGAATTGGGGGGTAAACTGTTTGAAATATTTC CCCGTTTTGGGAGGGGACACCACGAAAATATTCCTTCCCGTGGACACATT TGACCAACCCCCTTGTGAAAGGAGTTCAGTTCGTGCCAAGCCTGCCAACC ATGTAAGTGATAATGTAGTCGTGTCCCCTGGAGGAGCTGTTCTGTTGAAA TCCTCGCGGAGGGAACCGTCGAATCACCCCCCCCCCCAATCATTGAACGA TTCCGTAGTCGGTGCCATGGAGGGGGCAGGCAAGATGCAACCCCAAATGT ACAGCAAGGGAGGGGCAAGCGGGCAAGCCCTCATTGGATAAGAGTGGAGT GTTTGCCTTGTGTTGTCATCTCCTCGCCGCCGCCATGCCACGTGAGATCT CACTCGCCCGGTCGGCTTAATTTTACCCGTGAACATACCCCGTCTTGGAT AAGCATCGATGACCCGTGGTGTTTCCTTCCCCCTGACCCGTCTCGTCCCG TCACTCCTTTTCTTTTTGCTCGATAAGAAGACCTAGGCTCCACACAGAAA GTATCTCGTGCTTGAACAGAAGGGAAATACGGCTAGAGGAGGCTCGCTGG CTTGACGTATCTCTCACTCTCCATTCCGCATGCTCCACACTTTTCGCTGT GCCCTCTTCCCTTTTTTCCCTCGCCATCTCTACTCTGTAGTTCGTGTGGC TGTCGATCTGGCGCGCCGACGTGGTGCAGCTGAGCGTGACCTTCGCGTCC TTCCTCATCGCCATCTCCTTCATGATCGGCACAGCCGCAAGAAACTTGGT GACGGCGGTGCTTTTCATCTTCATTAGGAGACATTACGACGTCGGTGATA GGGTGCACATCTACAATGACGCCCAAACCAGCACTAAGCCCACCGACTTA ACGGTGGTAAAGGTCAACCTCCTGACCACGGTGTTCAAGCGCTGGGACGA GCAGGTTGGGAGGGGGTAGATGAGGGAGATTACGCCGTGGGATTTGCCGT TGCTCGAAGAGGTGGCTTGAGACAGGCGTCATTTATCTTGTCAACTGGTT GATACTTCGACCTGTCTCCCGCTTCTCACCCTCGGTCCCCTCTTCTCTCG CCGATGTTACTTGTGCGGATTACTTAAGGGCCTCCTTGGTCACGGAAACC TTAAGGCGGGGTTGGTAACTTCAAAGGGTAGGACTTCCTCGCGTCCCTCA CAATCTCGTCTAGACATCGACAAAGTAGACTTACCGTTACAGAGCTCACC AAGAGAAAGAAGCTATTTCCACACTGGTTGTGATGACATTTACTCTGAGC ATCGCTGCTTTGCTGCCCTGTGCTGTGACGTCCGCGGGGCTAACGCACCA GGTTTTCTACTTGCCCAACCACCTCCTTGCGTCTAAGACGATCGTGAACA TCCAAAGGACGGCCCACCAGTGGCATGAGTTCTATATTAACGTGAGCATT CACTTAACCTCCTCCGTCGGCGACGCGCACAGCACCCACCCACTGCGCTG TCGAAGGAAAAATGATCCTCCTCCCTCCATTCCTCCGCCTTTTAATGTGG CGTGTACGAAATTTACCCTTCTTATGTCGTTGAATTTCCGTCGCTGGAAA TTCTGGTCTCCGTCTCACATCGTTTGCCCATTTCACACACTTCGTCCTAC TCTGTTTTAGACATCCTTTAGTGGTGCGGATCCACCCGCGAAAGGACTCG GCATTGATGTGGGTAAGCGATGGCGTTCTATAGCCACAAAACCCTAAAGA AAGTTGCCTCATCGCCTAGCTTGCGATCTTTTCCGTGGTCATTTTTATTT GCGTTGCCTCATTCCCCCCCTACCCCGCTTTTCCCCCTCGACAATGTGCT CCTCTGCGCGCCCCTATCTCGTGCGGACAGATCGCGGCAAACACGCCTTC CACTAAGATCAAGACGCTCCATACGTGGTTGCAAACCTTCGCCAAGAGCA AAGACAAGCCGGAAGGTAAGAAGAAAATGACACCGACAAGGCTACTAATG GTACACTACCTAGTTGGCGTACGGCGTGACGCTTTTGCGGCGCTGGTTCT TTGGTGCCGGCGGCGGAAATCGAAGGGGAAGCGAGAGGAAGTTTTGACCA ATGTTAAGCGTTTTTGGCGCAGTTTTGAGTTTGTGTGTCTGTGAGAAAAT GTGTCAAAACATTCGCGGAATTCACGTAGTACTACTCTTTTCCTCAATTA CTGTTTTTTTCAAAATCGAACGAGTAACGTTCTTGTTGCATCATGTGGTC GAAGCGGATATTCCTCATTCGTGCGTGTACCTGGCGTCGTGCTGAGTCAG CAAACAATCCACACGATTTCGATTGATCCTAAAACCTCCTGGGGATTCTT TCGCTTGTTATTTTTTTACCCCAGGGCTATACCCGCGCATGGGGTTTTCA CTCACCAGTATTGAAGACAGTAACAGGCTCAACATCAGAATAACGTTTCG ACAGAGGGGCAACTGGCAGGCGAGCGAAATGACCGATTTCTCGGATAATA CTGTGTGTTTCGTTGGAGGAGGGAGGAAGAAGGGGTGCCAGTCAAGCGCT AGACAGACACGCCTGTTTTCTGCGCGTCCGACGTTACTGATATCGTTTGT GTATGTGAGATACACCTTGTGTGCGGTGCCGCTTCAAGCCGCTCCGCTTC GCCCTCCACGTAGTTGCATACAAAAAGGTTTACAATTTTTCACATATTTT GTCTGGTTTCGCTCTTGGTCTCTCGACGGCTAGGTGTCTGTTTCTTTTTG CTGTTATTTTTTGTCTCATGGTTGGCGTCCCACCCCTGCTTGGCGTCAGG GTCCCCGTGTTTCAGACGACTCGTCGAAATTTTGAACTCTCGGTTCCTTA CATACTACGGCCGTCGAGCCCCTTCTTCCCCACACACCCACCCACCCCTT TTTGTACGGCCCCTGCCAATAGTATTTAAGGCTGCTTTTCTCACCACCGT TGCGTTTTTGCCGATCATGTGGTCTTACGTTTCGCGCTCGGCGTTTGCGT TGAAGCAGAGGATGGAGAAGAAGTGGGCATGCCAGAGTATGTGTACCTGG GCGATCAAGAACGGTTGCGACAGCATCGGGATCTCGTACTCTCTGCCCGA GGTCCCCATCCGCGTCAAGAATAAGCTGTACTGAGAGCTCGTGAGCAGAT CGACGGGTCTGCCTCAGTCGCTGCTACATACCATCGTCGGTACTTTCAAC ATGCCCACTTCATGCGAACAATGGGTGTGAGTGAGAGAGGTGGCAAGGCA GC
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Coding sequence (CDS) from alignment at F-serratus_M_contig62:822879..826280+

>mRNA_F-serratus_M_contig62.17025.1 ID=mRNA_F-serratus_M_contig62.17025.1|Name=mRNA_F-serratus_M_contig62.17025.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig62:822879..826280+ (Fucus serratus male)
ATGACGCTTACCTTATTCATACTCGTCATGACGCTTACCTTATTCATACT
CGTCTTCGTGTGGCTGTCGATCTGGCGCGCCGACGTGGTGCAGCTGAGCG
TGACCTTCGCGTCCTTCCTCATCGCCATCTCCTTCATGATCGGCACAGCC
GCAAGAAACTTGGTGACGGCGGTGCTTTTCATCTTCATTAGGAGACATTA
CGACGTCGGTGATAGGGTGCACATCTACAATGACGCCCAAACCAGCACTA
AGCCCACCGACTTAACGGTGGTAAAGGTCAACCTCCTGACCACGGTGTTC
AAGCGCTGGGACGAGCAGTTCGTGTGGCTGTCGATCTGGCGCGCCGACGT
GGTGCAGCTGAGCGTGACCTTCGCGTCCTTCCTCATCGCCATCTCCTTCA
TGATCGGCACAGCCGCAAGAAACTTGGTGACGGCGGTGCTTTTCATCTTC
ATTAGGAGACATTACGACGTCGGTGATAGGGTGCACATCTACAATGACGC
CCAAACCAGCACTAAGCCCACCGACTTAACGGTGGTAAAGGTCAACCTCC
TGACCACGGTGTTCAAGCGCTGGGACGAGCAGGTTTTCTACTTGCCCAAC
CACCTCCTTGCGTCTAAGACGATCGTGAACATCCAAAGGACGGCCCACCA
GTGGCATGAGTTCTATATTAACGTTTTCTACTTGCCCAACCACCTCCTTG
CGTCTAAGACGATCGTGAACATCCAAAGGACGGCCCACCAGTGGCATGAG
TTCTATATTAACATCGCGGCAAACACGCCTTCCACTAAGATCAAGACGCT
CCATACGTGGTTGCAAACCTTCGCCAAGAGCAAAGACAAGCCGGAAGATC
GCGGCAAACACGCCTTCCACTAAGATCAAGACGCTCCATACGTGGTTGCA
AACCTTCGCCAAGAGCAAAGACAAGCCGGAAGGGCTATACCCGCGCATGG
GGTTTTCACTCACCAGTATTGAAGACAGTAACAGGCTCAACATCAGAATA
ACGTTTCGACAGAGGGGCAACTGGCAGGGCTATACCCGCGCATGGGGTTT
TCACTCACCAGTATTGAAGACAGTAACAGGCTCAACATCAGAATAACGTT
TCGACAGAGGGGCAACTGGCAGAGGATGGAGAAGAAGTGGGCATGCCAGA
GTATGTGTACCTGGGCGATCAAGAACGGTTGCGACAGCATCGGGATCTCG
TACTCTCTGCCCGAGGTCCCCATCCGCGTCAAGAATAAGCTGTACTGAAG
GATGGAGAAGAAGTGGGCATGCCAGAGTATGTGTACCTGGGCGATCAAGA
ACGGTTGCGACAGCATCGGGATCTCGTACTCTCTGCCCGAGGTCCCCATC
CGCGTCAAGAATAAGCTGTACTGA
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