mRNA_F-serratus_M_contig62.17025.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE) HSP 1 Score: 370 bits (950), Expect = 1.410e-116 Identity = 183/241 (75.93%), Postives = 206/241 (85.48%), Query Frame = 2
Query: 2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTS-TKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVKNKL 721
DSEHIARKLGL+I L LFIL FVWLSI DV+ LSVTFASFLIA SFMIGTAA NL+TAVLFIF+ R YDVGDRVHIY+D QT+ +P ++ V KV+L TT F+RWDEQ+FY+PNHLLA KTIVNIQRTAHQWHEFYI++AA T S K++TLH LQ FAK KDKPEGLYPRMGFSLT IEDS RL+IRI FRQRGNWQ MEKKWACQSMCTWAIKN CD+IGI+Y LPEVP+ +KNK+
Sbjct: 925 DSEHIARKLGLIIFWLILFILAFVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMTAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAKKKDKPEGLYPRMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVVMKNKM 1165
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI) HSP 1 Score: 365 bits (937), Expect = 6.410e-115 Identity = 181/240 (75.42%), Postives = 205/240 (85.42%), Query Frame = 2
Query: 2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTS-TKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVKNK 718
DSEHIA+KLGL+IM + LFIL FVWLSIW ADVV LSVTFASFLIA SFMIGTAA NL++AVLFIF+ R YDVGDRVHIY+ + T +PT++TVVKV+L+TTVFKRWDEQVFY+PNHLLA+KTIVNIQRTAHQWHEF I +AA T K+ L T LQ F+KSKDKPEGLY RMGFSL IEDS +L IRITFRQRGNWQ MEKKWACQSMCTWAIK+ CDS+ ISY LPEVP+++K K
Sbjct: 892 DSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKK 1131
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: D7FX36_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX36_ECTSI) HSP 1 Score: 338 bits (866), Expect = 2.310e-105 Identity = 165/219 (75.34%), Postives = 189/219 (86.30%), Query Frame = 2
Query: 68 FVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTS-TKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVKNKL 721
FVWLSI DV+ LSVTFASFLIA SFMIGTAA NL++AVLFIF+ R YDVGDRVHIY+D QT+ +P ++ VVKV+L TT F+RWDEQ+FY+PNHLLA KTIVNIQRTAHQWHEFYI++AA T S K++TLH LQ FAK KDKPEGL+PRMGFSLT IEDS RL+IRI FRQRGNWQ M+KKWACQSMCTWAIKN CD+IGI+Y LPEVPI +KNK+
Sbjct: 806 FVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVVKVDLRTTSFRRWDEQIFYIPNHLLADKTIVNIQRTAHQWHEFYIHVAATTSSQKLETLHDALQKFAKKKDKPEGLHPRMGFSLTGIEDSTRLSIRIIFRQRGNWQNMDKKWACQSMCTWAIKNACDTIGITYYLPEVPIVMKNKI 1024
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A6H5JDS1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE) HSP 1 Score: 272 bits (695), Expect = 3.250e-80 Identity = 151/249 (60.64%), Postives = 172/249 (69.08%), Query Frame = 2
Query: 2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQT-STKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQ---------RMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVKNK 718
DSEHIA+KLGL+IM + LFIL FVWLSIW ADVV LSVTFASFLIA SFMIGTAA NL++AVLFIF+ R YDVGDRVHIY+ + T +PT++TVVKV+L+TTVFKRWDEQ AS LQ F+KSKDKPEGLYPRMGFSL IEDS +L IRITFRQRGNWQ MEKKWACQSMCTWAIK+ CDS+ ISY LPE+P+++K K
Sbjct: 940 DSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTRGEEPTNVTVVKVDLMTTVFKRWDEQ---------AS-----------------------------------LQEFSKSKDKPEGLYPRMGFSLVRIEDSTKLTIRITFRQRGNWQVGQEAIVVVNMEKKWACQSMCTWAIKSACDSLNISYFLPEIPVQMKEK 1144
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A835YNP7_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP7_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.120e-71 Identity = 111/243 (45.68%), Postives = 170/243 (69.96%), Query Frame = 2
Query: 2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRV-HIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRV-KNKLY 724
DS+ +A KLG ++ L L+F+WL I+ D+ L++TFAS L+ +S +IG A+ NL +++FIF++R +DVGDRV H + D + + + V +++LL T F+ WDE+V+YLPNH+LA++ I+NIQR+ QWHEF+I + A+TPS K+ L FA+ +KP G++P + F+LT +E++NRL IR+ FRQ+GNWQ + +KWA QSMCT I N C +GI+Y+ P++P+ K KL+
Sbjct: 41 DSQRMAHKLGEVLGAGILIALIFIWLRIFGRDIFALTLTFASVLVGVSVLIGPASANLFASIVFIFVQRPFDVGDRVFHWFPDGRGEMQ--NAVVTRIDLLITCFRAWDEKVYYLPNHVLATRPIINIQRSGDQWHEFFIQVLASTPSQKLWELKAKCVEFAEKHNKPSGIHPHIQFALTGVENTNRLTIRVCFRQKGNWQILSRKWAVQSMCTNCIVNSCKELGITYTQPQLPLDFNKQKLF 281
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A835Z0M4_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.640e-47 Identity = 90/230 (39.13%), Postives = 147/230 (63.91%), Query Frame = 2
Query: 2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLP 691
DS+ + KLG +I L F+++F+WLSIW + +S+TF+SFL++ +FM G+ A LV +++F+F+ YDVGDR+ I + QTS + VVK+NLLTTVF+R D Q +PN LL+ ++N+QR+ + W EF + ++A TP K+ +L +Q FA + G+Y ++GF+ T I+DS +L +RI + R NW ++++W + AI + C +GI+++ P
Sbjct: 735 DSQQMVNKLGQIIGALMSFVMIFIWLSIWGYQFLSISITFSSFLLSFTFMFGSTATALVESIIFVFVTSAYDVGDRLMIPDIMQTS-RYHGCKVVKINLLTTVFERGDGQSLIMPNKLLSQMALINLQRSGNMWFEFVVGVSATTPLHKLHSLKGRMQKFAN--EDSSGIYHKIGFTFTEIQDSAKLVVRINVQGRFNWGDVKRRWEVHNATCQAIAHHCAELGITFTPP 961
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A0L0H4I0_SPIPD (EF-hand domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H4I0_SPIPD) HSP 1 Score: 125 bits (314), Expect = 1.080e-28 Identity = 77/230 (33.48%), Postives = 122/230 (53.04%), Query Frame = 2
Query: 2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLP 691
D KL +T F+ + L I+ + + + F SF++A+SF+ GTAAR ++LF+F+ YD GDRV I N +L V +V +LTTVFKR D Q+ Y PN L+ASK I N++R+ Q + + +TP K++ L + F KS+ P ++ IE+ N+L + + + +GNWQ K+W ++M +A+K +GI Y+ P
Sbjct: 683 DLSQALGKLNTFFYFVTSFVTFCIALPIFGISLTAM-LPFTSFILALSFVFGTAARTAFESLLFLFLTHPYDAGDRVVIDNQ--------NLLVEEVGVLTTVFKRLDGQLIYAPNTLVASKLIHNLRRSGDQSESIELQLNFDTPEEKLRALKERMIDFVKSE--PREFQGVCDIHISEIENLNKLKVNVILKHKGNWQDGSKRWNRRTMFMFALKKNLLELGIRYATP 901
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A058ZGC3_FONAL (EF-hand domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZGC3_FONAL) HSP 1 Score: 124 bits (312), Expect = 2.340e-28 Identity = 70/225 (31.11%), Postives = 122/225 (54.22%), Query Frame = 2
Query: 2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGI 676
DS + L + + L L+F +L I+ ++ V AS ++++SF+ G +A+ + V+++F+ YDVGDRV I + + V ++N+ TVF+RWDEQ F++PNH+L K ++NI+R+ +Q H FY+ + A+T S ++ TL +Q + +S+ PE + F L ++ R+ + IT Q NWQ +W ++ C +GI
Sbjct: 2051 DSGTMVNTLDRFVSLMLLVCLLFAFLLIFGTNIESTVVPVASLIVSMSFIFGHSAQRMFDNVIYLFVEHPYDVGDRVFIDDH--------NFIVARMNITATVFRRWDEQYFWIPNHILTDKVVINIRRSGNQRHTFYMFLDADTTSEQLGTLRGMMQGWVESQ--PERFARDVDFILFDVDTHGRMQMLITIGQLSNWQDGAVRWKNRTDSWLFFLQSCRELGI 2265
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A507E7B5_9FUNG (EF-hand domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E7B5_9FUNG) HSP 1 Score: 120 bits (300), Expect = 8.070e-27 Identity = 70/191 (36.65%), Postives = 107/191 (56.02%), Query Frame = 2
Query: 119 FASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYPRMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLP 691
F SF++A+SF+ GTAAR ++LF+F+ YD GDRV I D+Q +L V +V +LTTVFKR D Q+ Y PN L+A+K I N++R+ Q I + TP K++ L L + KS+ P + IE+ N+L + + + +GNWQ K+W ++M +A+K+ + I Y P
Sbjct: 850 FTSFILALSFVFGTAARTAFESLLFLFVTHPYDAGDRVVI--DSQ------NLLVEEVGVLTTVFKRMDGQLIYAPNTLVATKLIHNLRRSGDQSECIEIQLDFTTPEEKLRQLRERLVDYVKSE--PREFVGACDVHIADIENVNKLKLNVILKHKGNWQDGSKRWGRRTMFMYALKHHLTELEIRYLTP 1030
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.080e-26 Identity = 73/241 (30.29%), Postives = 128/241 (53.11%), Query Frame = 2
Query: 2 DSEHIARKLGLLIMTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLFIFIRRHYDVGDRVHIYNDAQTSTKPTDLTVVKVNLLTTVFKRWDEQVFYLPNHLLASKTIVNIQRTAHQWHEFYINIAANTPSTKIKTLHTWLQTFAKSKDKPEGLYP----RMGFSLTSIEDSNRLNIRITFRQRGNWQRMEKKWACQSMCTWAIKNGCDSIGISYSLPEVPIRVK 712
D E I KLG +I + FI +FV+L I+ +++ L VT+ S ++A SF+ G++A N + +FIF+ R YDVGDRV+I ++ + V ++N+LTTVF+RWD+ LPN LA + I N++R+ + ++ TP K++ L +Q +A++ P LY + + + + + + Q+G+WQ K + + + C +G+ Y+LP + +K
Sbjct: 898 DYESILIKLGYVISLVWSFIALFVFLWIFDQNILGLGVTWVSLVVAFSFLFGSSAANFFESCVFIFVTRAYDVGDRVYIKDELNDEA---NYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKERMQEYARAVTGP--LYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQGVTLK 1133 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig62.17025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig62.17025.1 >prot_F-serratus_M_contig62.17025.1 ID=prot_F-serratus_M_contig62.17025.1|Name=mRNA_F-serratus_M_contig62.17025.1|organism=Fucus serratus male|type=polypeptide|length=229bp MTLTLFILVFVWLSIWRADVVQLSVTFASFLIAISFMIGTAARNLVTAVLback to top mRNA from alignment at F-serratus_M_contig62:822879..826280+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig62.17025.1 ID=mRNA_F-serratus_M_contig62.17025.1|Name=mRNA_F-serratus_M_contig62.17025.1|organism=Fucus serratus male|type=mRNA|length=3402bp|location=Sequence derived from alignment at F-serratus_M_contig62:822879..826280+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig62:822879..826280+ >mRNA_F-serratus_M_contig62.17025.1 ID=mRNA_F-serratus_M_contig62.17025.1|Name=mRNA_F-serratus_M_contig62.17025.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig62:822879..826280+ (Fucus serratus male)back to top |