mRNA_F-serratus_M_contig1517.3552.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: D8LK11_ECTSI (GBBH-like_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK11_ECTSI) HSP 1 Score: 466 bits (1199), Expect = 1.230e-155 Identity = 235/277 (84.84%), Postives = 252/277 (90.97%), Query Frame = 1
Query: 7 PGLESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREVYRAAEVTADIP 837
PGLESV+DVVCVSSCKGGVGKSTVAVNLAYSLA+RGA VGLLDADVYGPSLPTLVNPDDVALRVSP+FPDL LL+P+ HRGVACMSFGWVNAKAGVPGAGG GAAVMRGPMVSKVI QLL GTDWGELEYLIIDMPPGTGDIQITL QALQ+SGAVVVTTPQKLSYVDVVKGIDMFA ++VP+LSVVENMAYFDC++GERHRPFGPGH LVEECG+ VF LPLSPAVA GSD GDPV+LS P GEEA+VYLSLAD VVRE +RA + AD+P
Sbjct: 281 PGLESVQDVVCVSSCKGGVGKSTVAVNLAYSLASRGAKVGLLDADVYGPSLPTLVNPDDVALRVSPAFPDLNLLSPIIHRGVACMSFGWVNAKAGVPGAGGHGAAVMRGPMVSKVINQLLLGTDWGELEYLIIDMPPGTGDIQITLGQALQMSGAVVVTTPQKLSYVDVVKGIDMFAEIKVPVLSVVENMAYFDCSNGERHRPFGPGHARELVEECGLASGCVFSLPLSPAVARGSDCGDPVSLSSPDGEEAKVYLSLADGVVRETFRAGKTAADVP 557
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A835YRS4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS4_9STRA) HSP 1 Score: 330 bits (846), Expect = 2.830e-104 Identity = 182/277 (65.70%), Postives = 205/277 (74.01%), Query Frame = 1
Query: 10 GLESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNH-GERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRG--------EEAQVYLSLADAVVREVYRA 813
GL V V+ V+SCKGGVGKSTVAVNLAY+LAARGA VGLLDADVYGPSLPTL+ P D LRV+ P KLL P+ H GV C+SFG+VN AGVPGAGG GAAVMRG MVSKVITQLL TDWGEL++LI+DMPPGTGDI ITLCQA ++GAVVVTTPQ+LSYVDVVKGIDMFAALRVP L+VVENMAYFDC G RHRPFG GH RL ++ VA SDGG P+ L+D RG +E +VY +LA+AVV RA
Sbjct: 150 GLAGVEHVIAVASCKGGVGKSTVAVNLAYALAARGARVGLLDADVYGPSLPTLIQPADTTLRVARDKPG-KLLVPIEHEGVRCLSFGYVNPNAGVPGAGGHGAAVMRGAMVSKVITQLLVQTDWGELDHLIVDMPPGTGDIHITLCQAAALTGAVVVTTPQRLSYVDVVKGIDMFAALRVPTLAVVENMAYFDCAPCGARHRPFGAGHAARLAQDA--------------RVAEASDGGVPIVLADARGVGGADGGSDEGRVYAALAEAVVAAALRA 411
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: W2PMG5_PHYPN (FeS_assembly_P domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PMG5_PHYPN) HSP 1 Score: 307 bits (786), Expect = 7.170e-97 Identity = 158/260 (60.77%), Postives = 199/260 (76.54%), Query Frame = 1
Query: 13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAV 792
L V D++ VSSCKGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+V+P+D +R S + + PV + GV CMSFG+VN +A PGAGG GAAVMRGPMVSK++ QL+ GT+WG+L+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF L+V +VVENM+YFDC+HG+RH PFGPGH LV++C + ++VF+LP+S +A +D G P LS EE + Y SLA V
Sbjct: 120 LAHVSDIIAVSSCKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMVSPEDCTIRQSKKIKNF--VEPVDYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGPMVSKLVDQLILGTEWGDLDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFEDLKVKTAAVVENMSYFDCSHGQRHYPFGPGHTQELVDKCNM--KNVFKLPISEQFSASADSGRPFVLSGLSPEEEKTYDSLATTV 374
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: W2PMG0_PHYPN (GBBH-like_N domain-containing protein n=35 Tax=Phytophthora TaxID=4783 RepID=W2PMG0_PHYPN) HSP 1 Score: 310 bits (794), Expect = 1.520e-96 Identity = 159/264 (60.23%), Postives = 202/264 (76.52%), Query Frame = 1
Query: 13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
L V D++ VSSCKGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+V+P+D +R S + + PV + GV CMSFG+VN +A PGAGG GAAVMRGPMVSK++ QL+ GT+WG+L+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF L+V +VVENM+YFDC+HG+RH PFGPGH LV++C + ++VF+LP+S +A +D G P LS EE + Y SLA V +E+
Sbjct: 147 LAHVSDIIAVSSCKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMVSPEDCTIRQSKKIKNF--VEPVDYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGPMVSKLVDQLILGTEWGDLDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFEDLKVKTAAVVENMSYFDCSHGQRHYPFGPGHTQELVDKCNM--KNVFKLPISEQFSASADSGRPFVLSGLSPEEEKTYDSLATTVAKEL 405
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A8K1C3M1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3M1_PYTOL) HSP 1 Score: 307 bits (786), Expect = 1.550e-95 Identity = 160/264 (60.61%), Postives = 200/264 (75.76%), Query Frame = 1
Query: 13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
L +V +++ VSSCKGGVGKSTV+VNLA+SLA RGA VG+LDAD+YGPSLPT+V+P+D +R S +L + PV + GV CMSFG+VN KA PGAGG GAAVMRGPMVSK++ QL+ GT+WGEL+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF L+V +VVENM+YFDC HG RH PFGPGH D LVE+ + ++VF+LP+S +A D G P LS +E +VY LA V E+
Sbjct: 136 LGNVAEIIAVSSCKGGVGKSTVSVNLAFSLAKRGARVGILDADIYGPSLPTMVSPEDKTIRASRKIKNL--VVPVEYEGVKCMSFGFVNQKA-APGAGGVGAAVMRGPMVSKLVDQLVLGTEWGELDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFNDLKVKTAAVVENMSYFDCTHGHRHYPFGPGHTDELVEKYAM--KNVFKLPISANFSASGDSGRPFVLSGLSADEEKVYDELAKKVAEEL 394
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A421GRU8_9STRA (FeS_assembly_P domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GRU8_9STRA) HSP 1 Score: 300 bits (767), Expect = 1.340e-93 Identity = 157/264 (59.47%), Postives = 198/264 (75.00%), Query Frame = 1
Query: 13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
L V D++ VSSCKGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+V+P D +R S + + PV + GV CMSFG+VN +A PGAGG GAAVMRG MVSK+I QL+ GT+WG+L+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF ++V +VVENM+YFDC+HGERH PFGPGH+ LVE+ + ++VF+LP+S ++ D G P LS E + Y SLA V +E+
Sbjct: 123 LAHVSDIIAVSSCKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMVSPQDCTIRQSRKVKNF--IEPVEYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGAMVSKLIDQLVLGTEWGDLDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFEDMKVKTAAVVENMSYFDCSHGERHYPFGPGHMKELVEKFNL--KNVFKLPISKQFSSSGDSGRPFVLSGLSPGEEKTYDSLASTVAKEL 381
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: H3GZX4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZX4_PHYRM) HSP 1 Score: 300 bits (768), Expect = 5.490e-93 Identity = 156/264 (59.09%), Postives = 198/264 (75.00%), Query Frame = 1
Query: 13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
L V D++ VSSCKGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+++P D +R S + + PV + GV CMSFG+VN +A PGAGG GAAVMRG MVSK+I QL+ GT+WG+L+YL++DMPPGTGD+QI+L Q + IS AVVVTTPQ+LS+VDV KGI MF L+V +VVENM+YFDC+HGERH PFGPGH LV++ + ++VF+LP+S +A D G P LS E+ + Y SLA V +E+
Sbjct: 121 LAHVSDIIAVSSCKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMISPQDRTIRQSSKVKNF--VEPVDYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGAMVSKLIDQLVLGTEWGDLDYLVVDMPPGTGDVQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFEDLKVKTAAVVENMSYFDCSHGERHYPFGPGHTQELVDKYNM--KNVFKLPISQQFSASGDSGRPFVLSGLSPEQEKTYDSLASTVAKEL 379
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A5D6XR15_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR15_9STRA) HSP 1 Score: 300 bits (768), Expect = 9.130e-93 Identity = 161/264 (60.98%), Postives = 198/264 (75.00%), Query Frame = 1
Query: 13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
L +V DV+ VSS KGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+V+P D+ +R S +L + P+ + GV CMSFG+VN KA PGAGG GAAVMRGPMVSK++ QL+ GT+WGEL+YL++DMPPGTGDIQI+L Q L IS AVVVTTPQ+LS+VDV KGI MF L+V +VVENMAYFDC+HG RH PFG GH + LV + + ++VFR+P+S +A D G P LS E A Y LA AV +E+
Sbjct: 120 LANVADVIVVSSGKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMVSPTDLTVRQSRKLKNL--VEPLVYEGVKCMSFGFVNQKA-APGAGGVGAAVMRGPMVSKIVDQLVLGTEWGELDYLVVDMPPGTGDIQISLSQQLAISAAVVVTTPQRLSFVDVEKGIAMFEDLKVKTAAVVENMAYFDCSHGHRHYPFGAGHTEELVAKYAM--KNVFRMPISETCSASGDSGRPFVLSGLSPEHAATYDELAVAVAKEL 378
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: K3WHC3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC3_GLOUD) HSP 1 Score: 300 bits (769), Expect = 1.100e-92 Identity = 154/264 (58.33%), Postives = 202/264 (76.52%), Query Frame = 1
Query: 13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
L +V D++ VSSCKGGVGKSTV+V+LA+SLA RGA VG+LDAD+YGPSLPT+V+P D+ +R S + + P+ + GV CMSFG+VN KA PGAGG GAAVMRGPMVSK++ QL+ GT+WGEL+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF L+V ++VVENM+YFDC+HG RH PFGPGH + LV++ + ++VF+LP+S ++A D G P LS ++ Y +LA V +E+
Sbjct: 128 LANVSDIIAVSSCKGGVGKSTVSVSLAFSLAKRGARVGILDADIYGPSLPTMVSPKDLTIRQSRKMKNF--VEPLEYEGVKCMSFGFVNQKA-APGAGGVGAAVMRGPMVSKIVDQLILGTEWGELDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFDDLKVKTVAVVENMSYFDCSHGHRHYPFGPGHTEELVKKYNM--KNVFKLPISENISASGDCGRPFVLSGLSPDQEMTYDALAGTVAKEL 386
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A0N7L5Z8_PLAHL (Predicted ATPase, nucleotide-binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Z8_PLAHL) HSP 1 Score: 298 bits (762), Expect = 3.840e-92 Identity = 153/264 (57.95%), Postives = 199/264 (75.38%), Query Frame = 1
Query: 13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
L V +++ VSSCKGGVGKSTVAVNLA+SL+ GA VG+LDAD+YGPSLPT+V+P D +R S + + PV + GV CMSFG+VN +A PGAGG GAAVMRGPMVSK+I QL+ GT+WG+L+YL++DMPPGTGDIQI++ Q + IS AVVVTTPQ+LS+VDV KGI MF L+V +VVENM+YFDC HG+RH PFG GH LVE+ I ++F+LP++ +++ +D G P LS+ EE++ Y SLA + +EV
Sbjct: 120 LAHVSEIIAVSSCKGGVGKSTVAVNLAFSLSKYGARVGILDADIYGPSLPTMVSPGDRTIRQSKKIKNF--VEPVEYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGPMVSKLIDQLILGTEWGDLDYLVVDMPPGTGDIQISISQQMPISAAVVVTTPQRLSFVDVEKGISMFEDLKVKTAAVVENMSYFDCCHGQRHYPFGSGHTQELVEKYSI--HNIFKLPIAERISSAADSGRPFVLSELSTEESKTYDSLATTIAKEV 378 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1517.3552.1 >prot_F-serratus_M_contig1517.3552.1 ID=prot_F-serratus_M_contig1517.3552.1|Name=mRNA_F-serratus_M_contig1517.3552.1|organism=Fucus serratus male|type=polypeptide|length=224bp MSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDback to top mRNA from alignment at F-serratus_M_contig1517:69783..74296- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1517.3552.1 ID=mRNA_F-serratus_M_contig1517.3552.1|Name=mRNA_F-serratus_M_contig1517.3552.1|organism=Fucus serratus male|type=mRNA|length=4514bp|location=Sequence derived from alignment at F-serratus_M_contig1517:69783..74296- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1517:69783..74296- >mRNA_F-serratus_M_contig1517.3552.1 ID=mRNA_F-serratus_M_contig1517.3552.1|Name=mRNA_F-serratus_M_contig1517.3552.1|organism=Fucus serratus male|type=CDS|length=1344bp|location=Sequence derived from alignment at F-serratus_M_contig1517:69783..74296- (Fucus serratus male)back to top |