mRNA_F-serratus_M_contig1517.3552.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1517.3552.1
Unique NamemRNA_F-serratus_M_contig1517.3552.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: D8LK11_ECTSI (GBBH-like_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK11_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 1.230e-155
Identity = 235/277 (84.84%), Postives = 252/277 (90.97%), Query Frame = 1
Query:    7 PGLESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREVYRAAEVTADIP 837
            PGLESV+DVVCVSSCKGGVGKSTVAVNLAYSLA+RGA VGLLDADVYGPSLPTLVNPDDVALRVSP+FPDL LL+P+ HRGVACMSFGWVNAKAGVPGAGG GAAVMRGPMVSKVI QLL GTDWGELEYLIIDMPPGTGDIQITL QALQ+SGAVVVTTPQKLSYVDVVKGIDMFA ++VP+LSVVENMAYFDC++GERHRPFGPGH   LVEECG+    VF LPLSPAVA GSD GDPV+LS P GEEA+VYLSLAD VVRE +RA +  AD+P
Sbjct:  281 PGLESVQDVVCVSSCKGGVGKSTVAVNLAYSLASRGAKVGLLDADVYGPSLPTLVNPDDVALRVSPAFPDLNLLSPIIHRGVACMSFGWVNAKAGVPGAGGHGAAVMRGPMVSKVINQLLLGTDWGELEYLIIDMPPGTGDIQITLGQALQMSGAVVVTTPQKLSYVDVVKGIDMFAEIKVPVLSVVENMAYFDCSNGERHRPFGPGHARELVEECGLASGCVFSLPLSPAVARGSDCGDPVSLSSPDGEEAKVYLSLADGVVRETFRAGKTAADVP 557          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A835YRS4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS4_9STRA)

HSP 1 Score: 330 bits (846), Expect = 2.830e-104
Identity = 182/277 (65.70%), Postives = 205/277 (74.01%), Query Frame = 1
Query:   10 GLESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNH-GERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRG--------EEAQVYLSLADAVVREVYRA 813
            GL  V  V+ V+SCKGGVGKSTVAVNLAY+LAARGA VGLLDADVYGPSLPTL+ P D  LRV+   P  KLL P+ H GV C+SFG+VN  AGVPGAGG GAAVMRG MVSKVITQLL  TDWGEL++LI+DMPPGTGDI ITLCQA  ++GAVVVTTPQ+LSYVDVVKGIDMFAALRVP L+VVENMAYFDC   G RHRPFG GH  RL ++                VA  SDGG P+ L+D RG        +E +VY +LA+AVV    RA
Sbjct:  150 GLAGVEHVIAVASCKGGVGKSTVAVNLAYALAARGARVGLLDADVYGPSLPTLIQPADTTLRVARDKPG-KLLVPIEHEGVRCLSFGYVNPNAGVPGAGGHGAAVMRGAMVSKVITQLLVQTDWGELDHLIVDMPPGTGDIHITLCQAAALTGAVVVTTPQRLSYVDVVKGIDMFAALRVPTLAVVENMAYFDCAPCGARHRPFGAGHAARLAQDA--------------RVAEASDGGVPIVLADARGVGGADGGSDEGRVYAALAEAVVAAALRA 411          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: W2PMG5_PHYPN (FeS_assembly_P domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PMG5_PHYPN)

HSP 1 Score: 307 bits (786), Expect = 7.170e-97
Identity = 158/260 (60.77%), Postives = 199/260 (76.54%), Query Frame = 1
Query:   13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAV 792
            L  V D++ VSSCKGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+V+P+D  +R S    +   + PV + GV CMSFG+VN +A  PGAGG GAAVMRGPMVSK++ QL+ GT+WG+L+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF  L+V   +VVENM+YFDC+HG+RH PFGPGH   LV++C +  ++VF+LP+S   +A +D G P  LS    EE + Y SLA  V
Sbjct:  120 LAHVSDIIAVSSCKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMVSPEDCTIRQSKKIKNF--VEPVDYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGPMVSKLVDQLILGTEWGDLDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFEDLKVKTAAVVENMSYFDCSHGQRHYPFGPGHTQELVDKCNM--KNVFKLPISEQFSASADSGRPFVLSGLSPEEEKTYDSLATTV 374          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: W2PMG0_PHYPN (GBBH-like_N domain-containing protein n=35 Tax=Phytophthora TaxID=4783 RepID=W2PMG0_PHYPN)

HSP 1 Score: 310 bits (794), Expect = 1.520e-96
Identity = 159/264 (60.23%), Postives = 202/264 (76.52%), Query Frame = 1
Query:   13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
            L  V D++ VSSCKGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+V+P+D  +R S    +   + PV + GV CMSFG+VN +A  PGAGG GAAVMRGPMVSK++ QL+ GT+WG+L+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF  L+V   +VVENM+YFDC+HG+RH PFGPGH   LV++C +  ++VF+LP+S   +A +D G P  LS    EE + Y SLA  V +E+
Sbjct:  147 LAHVSDIIAVSSCKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMVSPEDCTIRQSKKIKNF--VEPVDYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGPMVSKLVDQLILGTEWGDLDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFEDLKVKTAAVVENMSYFDCSHGQRHYPFGPGHTQELVDKCNM--KNVFKLPISEQFSASADSGRPFVLSGLSPEEEKTYDSLATTVAKEL 405          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A8K1C3M1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3M1_PYTOL)

HSP 1 Score: 307 bits (786), Expect = 1.550e-95
Identity = 160/264 (60.61%), Postives = 200/264 (75.76%), Query Frame = 1
Query:   13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
            L +V +++ VSSCKGGVGKSTV+VNLA+SLA RGA VG+LDAD+YGPSLPT+V+P+D  +R S    +L  + PV + GV CMSFG+VN KA  PGAGG GAAVMRGPMVSK++ QL+ GT+WGEL+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF  L+V   +VVENM+YFDC HG RH PFGPGH D LVE+  +  ++VF+LP+S   +A  D G P  LS    +E +VY  LA  V  E+
Sbjct:  136 LGNVAEIIAVSSCKGGVGKSTVSVNLAFSLAKRGARVGILDADIYGPSLPTMVSPEDKTIRASRKIKNL--VVPVEYEGVKCMSFGFVNQKA-APGAGGVGAAVMRGPMVSKLVDQLVLGTEWGELDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFNDLKVKTAAVVENMSYFDCTHGHRHYPFGPGHTDELVEKYAM--KNVFKLPISANFSASGDSGRPFVLSGLSADEEKVYDELAKKVAEEL 394          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A421GRU8_9STRA (FeS_assembly_P domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GRU8_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.340e-93
Identity = 157/264 (59.47%), Postives = 198/264 (75.00%), Query Frame = 1
Query:   13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
            L  V D++ VSSCKGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+V+P D  +R S    +   + PV + GV CMSFG+VN +A  PGAGG GAAVMRG MVSK+I QL+ GT+WG+L+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF  ++V   +VVENM+YFDC+HGERH PFGPGH+  LVE+  +  ++VF+LP+S   ++  D G P  LS     E + Y SLA  V +E+
Sbjct:  123 LAHVSDIIAVSSCKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMVSPQDCTIRQSRKVKNF--IEPVEYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGAMVSKLIDQLVLGTEWGDLDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFEDMKVKTAAVVENMSYFDCSHGERHYPFGPGHMKELVEKFNL--KNVFKLPISKQFSSSGDSGRPFVLSGLSPGEEKTYDSLASTVAKEL 381          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: H3GZX4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZX4_PHYRM)

HSP 1 Score: 300 bits (768), Expect = 5.490e-93
Identity = 156/264 (59.09%), Postives = 198/264 (75.00%), Query Frame = 1
Query:   13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
            L  V D++ VSSCKGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+++P D  +R S    +   + PV + GV CMSFG+VN +A  PGAGG GAAVMRG MVSK+I QL+ GT+WG+L+YL++DMPPGTGD+QI+L Q + IS AVVVTTPQ+LS+VDV KGI MF  L+V   +VVENM+YFDC+HGERH PFGPGH   LV++  +  ++VF+LP+S   +A  D G P  LS    E+ + Y SLA  V +E+
Sbjct:  121 LAHVSDIIAVSSCKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMISPQDRTIRQSSKVKNF--VEPVDYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGAMVSKLIDQLVLGTEWGDLDYLVVDMPPGTGDVQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFEDLKVKTAAVVENMSYFDCSHGERHYPFGPGHTQELVDKYNM--KNVFKLPISQQFSASGDSGRPFVLSGLSPEQEKTYDSLASTVAKEL 379          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A5D6XR15_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR15_9STRA)

HSP 1 Score: 300 bits (768), Expect = 9.130e-93
Identity = 161/264 (60.98%), Postives = 198/264 (75.00%), Query Frame = 1
Query:   13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
            L +V DV+ VSS KGGVGKSTVAVNLA+SLA RGA VG+LDAD+YGPSLPT+V+P D+ +R S    +L  + P+ + GV CMSFG+VN KA  PGAGG GAAVMRGPMVSK++ QL+ GT+WGEL+YL++DMPPGTGDIQI+L Q L IS AVVVTTPQ+LS+VDV KGI MF  L+V   +VVENMAYFDC+HG RH PFG GH + LV +  +  ++VFR+P+S   +A  D G P  LS    E A  Y  LA AV +E+
Sbjct:  120 LANVADVIVVSSGKGGVGKSTVAVNLAFSLAKRGARVGILDADIYGPSLPTMVSPTDLTVRQSRKLKNL--VEPLVYEGVKCMSFGFVNQKA-APGAGGVGAAVMRGPMVSKIVDQLVLGTEWGELDYLVVDMPPGTGDIQISLSQQLAISAAVVVTTPQRLSFVDVEKGIAMFEDLKVKTAAVVENMAYFDCSHGHRHYPFGAGHTEELVAKYAM--KNVFRMPISETCSASGDSGRPFVLSGLSPEHAATYDELAVAVAKEL 378          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: K3WHC3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC3_GLOUD)

HSP 1 Score: 300 bits (769), Expect = 1.100e-92
Identity = 154/264 (58.33%), Postives = 202/264 (76.52%), Query Frame = 1
Query:   13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
            L +V D++ VSSCKGGVGKSTV+V+LA+SLA RGA VG+LDAD+YGPSLPT+V+P D+ +R S    +   + P+ + GV CMSFG+VN KA  PGAGG GAAVMRGPMVSK++ QL+ GT+WGEL+YL++DMPPGTGDIQI+L Q + IS AVVVTTPQ+LS+VDV KGI MF  L+V  ++VVENM+YFDC+HG RH PFGPGH + LV++  +  ++VF+LP+S  ++A  D G P  LS    ++   Y +LA  V +E+
Sbjct:  128 LANVSDIIAVSSCKGGVGKSTVSVSLAFSLAKRGARVGILDADIYGPSLPTMVSPKDLTIRQSRKMKNF--VEPLEYEGVKCMSFGFVNQKA-APGAGGVGAAVMRGPMVSKIVDQLILGTEWGELDYLVVDMPPGTGDIQISLSQQMAISAAVVVTTPQRLSFVDVEKGIAMFDDLKVKTVAVVENMSYFDCSHGHRHYPFGPGHTEELVKKYNM--KNVFKLPISENISASGDCGRPFVLSGLSPDQEMTYDALAGTVAKEL 386          
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Match: A0A0N7L5Z8_PLAHL (Predicted ATPase, nucleotide-binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Z8_PLAHL)

HSP 1 Score: 298 bits (762), Expect = 3.840e-92
Identity = 153/264 (57.95%), Postives = 199/264 (75.38%), Query Frame = 1
Query:   13 LESVRDVVCVSSCKGGVGKSTVAVNLAYSLAARGASVGLLDADVYGPSLPTLVNPDDVALRVSPSFPDLKLLAPVPHRGVACMSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIIDMPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPILSVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAAGSDGGDPVALSDPRGEEAQVYLSLADAVVREV 804
            L  V +++ VSSCKGGVGKSTVAVNLA+SL+  GA VG+LDAD+YGPSLPT+V+P D  +R S    +   + PV + GV CMSFG+VN +A  PGAGG GAAVMRGPMVSK+I QL+ GT+WG+L+YL++DMPPGTGDIQI++ Q + IS AVVVTTPQ+LS+VDV KGI MF  L+V   +VVENM+YFDC HG+RH PFG GH   LVE+  I   ++F+LP++  +++ +D G P  LS+   EE++ Y SLA  + +EV
Sbjct:  120 LAHVSEIIAVSSCKGGVGKSTVAVNLAFSLSKYGARVGILDADIYGPSLPTMVSPGDRTIRQSKKIKNF--VEPVEYEGVKCMSFGFVNQRA-APGAGGVGAAVMRGPMVSKLIDQLILGTEWGDLDYLVVDMPPGTGDIQISISQQMPISAAVVVTTPQRLSFVDVEKGISMFEDLKVKTAAVVENMSYFDCCHGQRHYPFGSGHTQELVEKYSI--HNIFKLPIAERISSAADSGRPFVLSELSTEESKTYDSLATTIAKEV 378          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1517.3552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK11_ECTSI1.230e-15584.84GBBH-like_N domain-containing protein n=2 Tax=Ecto... [more]
A0A835YRS4_9STRA2.830e-10465.70P-loop containing nucleoside triphosphate hydrolas... [more]
W2PMG5_PHYPN7.170e-9760.77FeS_assembly_P domain-containing protein n=6 Tax=P... [more]
W2PMG0_PHYPN1.520e-9660.23GBBH-like_N domain-containing protein n=35 Tax=Phy... [more]
A0A8K1C3M1_PYTOL1.550e-9560.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A421GRU8_9STRA1.340e-9359.47FeS_assembly_P domain-containing protein n=3 Tax=P... [more]
H3GZX4_PHYRM5.490e-9359.09Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6XR15_9STRA9.130e-9360.98Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WHC3_GLOUD1.100e-9258.33Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0N7L5Z8_PLAHL3.840e-9257.95Predicted ATPase, nucleotide-binding n=1 Tax=Plasm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1517contigF-serratus_M_contig1517:69783..74296 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.2
Seed ortholog evalue3.7e-85
Seed eggNOG ortholog2880.D8LK11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Component of the cytosolic iron-sulfur (Fe S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins
EggNOG OGsCOG0489@1,KOG3022@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-06_007750.1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1469
Cds size672
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1517.3552.1prot_F-serratus_M_contig1517.3552.1Fucus serratus malepolypeptideF-serratus_M_contig1517 70322..73774 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929501.2638032-UTR-F-serratus_M_contig1517:69782..703211622929501.2638032-UTR-F-serratus_M_contig1517:69782..70321Fucus serratus maleUTRF-serratus_M_contig1517 69783..70321 -
1690962881.3428664-UTR-F-serratus_M_contig1517:69782..703211690962881.3428664-UTR-F-serratus_M_contig1517:69782..70321Fucus serratus maleUTRF-serratus_M_contig1517 69783..70321 -
1622929501.4083545-UTR-F-serratus_M_contig1517:73774..738581622929501.4083545-UTR-F-serratus_M_contig1517:73774..73858Fucus serratus maleUTRF-serratus_M_contig1517 73775..73858 -
1690962881.4418254-UTR-F-serratus_M_contig1517:73774..738581690962881.4418254-UTR-F-serratus_M_contig1517:73774..73858Fucus serratus maleUTRF-serratus_M_contig1517 73775..73858 -
1622929501.4241734-UTR-F-serratus_M_contig1517:74122..742961622929501.4241734-UTR-F-serratus_M_contig1517:74122..74296Fucus serratus maleUTRF-serratus_M_contig1517 74123..74296 -
1690962881.4537919-UTR-F-serratus_M_contig1517:74122..742961690962881.4537919-UTR-F-serratus_M_contig1517:74122..74296Fucus serratus maleUTRF-serratus_M_contig1517 74123..74296 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929501.282277-CDS-F-serratus_M_contig1517:70321..703251622929501.282277-CDS-F-serratus_M_contig1517:70321..70325Fucus serratus maleCDSF-serratus_M_contig1517 70322..70325 -
1690962881.360335-CDS-F-serratus_M_contig1517:70321..703251690962881.360335-CDS-F-serratus_M_contig1517:70321..70325Fucus serratus maleCDSF-serratus_M_contig1517 70322..70325 -
1622929501.3003736-CDS-F-serratus_M_contig1517:71294..713781622929501.3003736-CDS-F-serratus_M_contig1517:71294..71378Fucus serratus maleCDSF-serratus_M_contig1517 71295..71378 -
1690962881.3681602-CDS-F-serratus_M_contig1517:71294..713781690962881.3681602-CDS-F-serratus_M_contig1517:71294..71378Fucus serratus maleCDSF-serratus_M_contig1517 71295..71378 -
1622929501.3223143-CDS-F-serratus_M_contig1517:71822..718991622929501.3223143-CDS-F-serratus_M_contig1517:71822..71899Fucus serratus maleCDSF-serratus_M_contig1517 71823..71899 -
1690962881.3759596-CDS-F-serratus_M_contig1517:71822..718991690962881.3759596-CDS-F-serratus_M_contig1517:71822..71899Fucus serratus maleCDSF-serratus_M_contig1517 71823..71899 -
1622929501.3374858-CDS-F-serratus_M_contig1517:72277..724961622929501.3374858-CDS-F-serratus_M_contig1517:72277..72496Fucus serratus maleCDSF-serratus_M_contig1517 72278..72496 -
1690962881.3903284-CDS-F-serratus_M_contig1517:72277..724961690962881.3903284-CDS-F-serratus_M_contig1517:72277..72496Fucus serratus maleCDSF-serratus_M_contig1517 72278..72496 -
1622929501.3580265-CDS-F-serratus_M_contig1517:72789..729171622929501.3580265-CDS-F-serratus_M_contig1517:72789..72917Fucus serratus maleCDSF-serratus_M_contig1517 72790..72917 -
1690962881.4045913-CDS-F-serratus_M_contig1517:72789..729171690962881.4045913-CDS-F-serratus_M_contig1517:72789..72917Fucus serratus maleCDSF-serratus_M_contig1517 72790..72917 -
1622929501.3777301-CDS-F-serratus_M_contig1517:73301..733711622929501.3777301-CDS-F-serratus_M_contig1517:73301..73371Fucus serratus maleCDSF-serratus_M_contig1517 73302..73371 -
1690962881.4147027-CDS-F-serratus_M_contig1517:73301..733711690962881.4147027-CDS-F-serratus_M_contig1517:73301..73371Fucus serratus maleCDSF-serratus_M_contig1517 73302..73371 -
1622929501.3928385-CDS-F-serratus_M_contig1517:73684..737741622929501.3928385-CDS-F-serratus_M_contig1517:73684..73774Fucus serratus maleCDSF-serratus_M_contig1517 73685..73774 -
1690962881.4247494-CDS-F-serratus_M_contig1517:73684..737741690962881.4247494-CDS-F-serratus_M_contig1517:73684..73774Fucus serratus maleCDSF-serratus_M_contig1517 73685..73774 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1517.3552.1

>prot_F-serratus_M_contig1517.3552.1 ID=prot_F-serratus_M_contig1517.3552.1|Name=mRNA_F-serratus_M_contig1517.3552.1|organism=Fucus serratus male|type=polypeptide|length=224bp
MSFGWVNAKAGVPGAGGRGAAVMRGPMVSKVITQLLQGTDWGELEYLIID
MPPGTGDIQITLCQALQISGAVVVTTPQKLSYVDVVKGIDMFAALRVPIL
SVVENMAYFDCNHGERHRPFGPGHVDRLVEECGIGRESVFRLPLSPAVAA
GSDGGDPVALSDPRGEEAQVYLSLADAVVREVYRAAEVTADIPLRFPLSP
SEGWCCATCPSKRRRSTLSLLSS*
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mRNA from alignment at F-serratus_M_contig1517:69783..74296-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1517.3552.1 ID=mRNA_F-serratus_M_contig1517.3552.1|Name=mRNA_F-serratus_M_contig1517.3552.1|organism=Fucus serratus male|type=mRNA|length=4514bp|location=Sequence derived from alignment at F-serratus_M_contig1517:69783..74296- (Fucus serratus male)
GTTCCCCCGGGGCTCGAATCCGTGCGGGACGTGGTGTGCGTGAGCAGCTG TAAAGGCGGGGTGGGGAAAAGTACGGTGGCGGTGAACCTTGCGTACTCTC TGGCGGCCCGGGGCGCCTCGGTCGGGCTGCTGGACGCTGACGTTTACGGT CCGAGCTTGCCCACACTCGTTAACGTGAGTGAGTATGTCTAGGTCTATCG GTGGTTGCGAGGGACGGTGGTTATGAATTACAAGGAGAAGGTAAGCCACC CGATGCGTGCAGTTTGAAACGTATTCTGGTAGACCAAATCGTTCGAGAAA TGGAGCGCGCTCGATTATGTGCGGTTTTATCCATCCGTTCCCCGATTCCG TTCTGTGCGTGGTCGCGCTTCCGCCTCACCTCCCCGCTGTGTGTCTCGCT GATCTGCTCCGACGATGCAACTCAACATCCAACACAAGCCTGACGACGTC GCTCTGCGAGTCAGCCCCTCTTTCCCGGACTTGAAGCTTCTAGCTCCCGT TCCTCACCGTGGGGTAGCGTGCATGAGCTTCGGGTGGGTCAACGCCAAGG CCGGGGTTCCCGGGGCCGGCGGAAGAGGCGCCGCCGTGATGAGAGGTCCG ATGGTGTCCAAGGTACCGAACGCGACGTCGTGGTACGCGTAACGGTGCTG TACCACTCGCGGAGCGGTACCCGCTTCTCTTATGGATGGACGGCACGATG CACGCCACGAAGTATAACGTTGAAGTCGATCTTGATGATCACGAAGATGG TCGAGTAATCGAACGTTTCTGAGCCCGCAGCGACTCGGGCGTAGAACATA GACCCGCGTGCAAGCCTGCGGGACTGTTGCGTGCAAACGCGTCCGAACAT GTCTTCCTCATTGTCCCTCTACTCCCAAAAGCCAGTAGTATTTTTTGTCT CGTACGGCGTCGTTCTTCCTCCAAGGTGATAACTCAGCTACTCCAAGGCA CTGACTGGGGAGAGCTAGAGTACCTTATTATCGACATGCCCCCAGGTACG ACTTTACCTCAGTCTTGCGTTGTTTGGTGACTCAACAAGTGGGCGGGGTG GTGCGCTGAGGGGTAGGGTCAAGGGGCAGCAGGGTGTACAGGGAATGGGC CGTCTCGTATGTCTCATGGTCCAGGCGGCAGTGCAAATCTGAAACAGGAT GTTTGTATTTGTGCCCCGAATTCACCGTGGATGCAGGGTAGGCGCTCGCG ATCGCTCCTTTTGCCTCTCCTAGGGTATAGGAGAGACGACCGTTACAATC GATTGTTCATTTATTTTATCCCCTACGACTTTCGCTGTGACCGCTGCGTC CTACAAACGCCTCCTTCCCCCTCGCTTCGTCTTGACCCGCACCGGGACTG TGTATGTTATTTCTTTCTGCTGTCAAAAGGAACCGGCGACATCCAGATCA CGCTTTGCCAGGCTCTCCAGATAAGCGGGGCGGTCGTTGTGACCACCCCT CAGAAACTGAGCTACGTGGACGTCGTGAAGGGCATCGATATGTTCGCAGC GCTCAGGGTGAGCTTACGCGCCGCAGTGCCTAGCGTTTGTGACCGAGTAT CGAAAGTATTACATCGCGCGCCGTGAATACAGTGACTCTTGATCTCCACC GACCGCTCGCATGCTTGTCTCGGCAACGTAGCTAGGAATCTATTCGACTC TGTCATTGCCCCCCCTAGTACCTTCTCTGTGGGTGCTTACGGGAGGATCT ATGTACACCGAACGTTTTTCCTGAGCGAACGTTTCTGCGGTACAGACGTT GTTGCCTGCATGCGCTCTCGCTCGGGCGGTGTTTCGGACGACGGCGCCAG GTGCCGATCCTCTCGGTCGTGGAGAACATGGCCTACTTTGACTGCAACCA CGGAGAGCGACATCGACCTTTTGGCCCGGGCCACGTCGACCGGCTTGTCG AAGAGTGCGGGATCGGCCGCGAGAGCGTGTTCCGCCTCCCGCTCAGCCCC GCGGTGGCGGCCGGTAGCGACGGCGGTGACCCCGTGGCGTTGTCCGATCC CCGAGGGGAGGAAGCGCAGGTACGAGGAAATCGATCGACCGCAACGCAGG CATAGCTTCAACAAGAGCGAGAGAGGGAGAGGGGGGGGGTGATGCGAGTG CGCCTCTCGGCTCTCTTGTGCCCCGTAATTTTGTTGCTGTTTGATCGCTG AGGCGCGAGTCGAGGCTTGGAAAGCTTGTCTCGAAACCGGTCGGAGGATG CGCTAGTCCCCAGCATATATATTATGTGCATTGTATGAAATGAGTATTGT TTGTTGAAACAGCAGTCCAAGAAACGGTTTTGCGAACACTCGTCCCGAAG GAGAAAACCCAACCCAATGAGCGACCGACCTGTGTTTTTCTGCATCTTGC CGAAATTTCTTTCATGGATATTTTTCCTCCTTTTTACGTTGTGACAGGTG TATTTGTCTCTCGCTGATGCTGTGGTTCGGGAGGTGTACCGTGCAGCGGA AGTCACCGCCGACATCCCCCTCAGGTGGTTCCTTGCCCCCCGCACCCTCC CCCCTATCCTGTGTGTAGCATCATGAAGGTCGCATAAAGACTCGAACTCC TTACCTGCGTGAGCAGGTTCATGCATCTTCGTACTATTAATAGTAAGTAA AGTGGGAACATCCGTAGCTTAGCCTATGACAAAGTGTATGTTAAAAAAGT CATGTCGTTGCAAGAGTATAGCATTTTGTAAGACCGGTATCTTGGCGCCA CCTCCTTCTAAAGCTCCCAATAAGTTGTTAATGTTATCCAGGGGGCGGCG TTGTTCACTACTATAGTAGTAAGGTGCTGTACACCCCTTAATATCTTACC CGACCCTTCCTTCCATTGTCTAGAGGGGCTCCTGAGATGCTCACTTGCCG CAGGAAATATCCATCCCTCTCAAAACCTGTGTGTACGTACTTTTGCTCTT TGGTCATCGTTGGCGCAGGTTTCCTTTAAGCCCGAGCGAGGGCTGGTGCT GCGCTACATGTCCGAGCAAGAGGCGGCGGAGTACGTTATCCCTCCTTTCC AGGTGGGGGTGGGAGAAAACGTCAACCCGGCCTTTCTCGCGAGCGAAGCA GCGCGATATCGACACATCTCCTGCCCAGTCCCGCCCCAAGTTTATTTCTC CACGGACGACTCTCGTCGGAATCCAAGAAAATAAAAAGAGCACTAAATGC CATCAACATGAATACCAAGTATTGCTATTAATAGTATATTGATGGTCACA CATTTAGCAAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGT GGTCAGCTGAACAGGGAAATTAACATTCCCCTGTTCGCGTTCGCGCCTGA GAATTTGGTCTCGCGAGACGAGTTCGGCAGTCCCGTCCCGCGTCAGCCTG CTCACCTCCATACTCAGGCTGAATGTGGTGCTTAAGAGATTCTCCCCGAG TTCCGCGGCGGCGTCCATTTATTTACTTTAGACCGCCATACGCCATCGGG TCAGACCCATGTTTATTGGGTCACGCAATTGCGTACCGATGGCGTTCACT ACCGAGAGTCCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAAC GAGTGCTGCCTTGGCAGATCACCATGGACCAATCAATATGCGCCTCTCTT TCCCACAATCACTAATGGTATAAAAGTATATACTGTATCTAGTATTAATA CTATATCAGTAAGTAGTACGGTATCGTGTTGTTTGCTTTTCGGGACACGC GTAAGATGAGATTCTCGATTGATCAGTGCTAAAGCATAGATTAATTGATA ACACCTCGCGACTCAAATCTTGAGGATCAGCACGCGAGATCATTTAGATA TTTTCTCCCCGTCCGTTCCCCCCCCCCCCCCCTCCTCAATAAAGAACAAA ACAAAGATGACATGGGAACTCCGTACGTGGTACAAATTGCCCCCAGAAGA TCATAAACCTTCCGCGTAATAAAATCTTAAACGAAGTTTTTACGAATCTA TGACTTTTTTTAATTAATCAGCTGAGAACGCGGGATCCGGCGACGGGTGA GCCGCTCAGCGCTGAGGAGAATGCCGCGGTGAGGGAGGATGTGAAACCGT TAGCAGTGAGCCCCCGAGGCAACTACGCTGTGTCCATCTCTTGGAGCGAC GGCCACCGCGGAGCCATCTACAGCTACGACGTGCTGCGAAAGGTTGCGGA GGCCGTTGCGTCTGAACGGGGACAGGCAGGCGCCGCGTAGAGTGTTTCGC GGTAAAAGTCACGGCCAAAGTTTGTTTTTTTTAGAAAATAAAGTCTTAGG TCTCTCTTTATTGTGGTTTGTACGGTACCCTTGTGGGGAAATCTATTCTC CGGGGTGTAAGTGGTGGAATCCTTTATGTTCTACGAGCACATTGTAGCCA ACCGTCCTTCGTGCCTGGCCTGAAGGTGCTTTCTACTCTTGACTAAAGTG CAACGAATTAGACACTATTGTTAATAGTATACAGGTATGTATTGTCTTGG TAAAATGCTCGAGCGTTCGGGCAAATCGCGCCTATTTGCCTCTGCTTGGG CAAAACAAAATTCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1517:69783..74296-

>mRNA_F-serratus_M_contig1517.3552.1 ID=mRNA_F-serratus_M_contig1517.3552.1|Name=mRNA_F-serratus_M_contig1517.3552.1|organism=Fucus serratus male|type=CDS|length=1344bp|location=Sequence derived from alignment at F-serratus_M_contig1517:69783..74296- (Fucus serratus male)
ATGAGCTTCGGGTGGGTCAACGCCAAGGCCGGGGTTCCCGGGGCCGGCGG
AAGAGGCGCCGCCGTGATGAGAGGTCCGATGGTGTCCAAGATGAGCTTCG
GGTGGGTCAACGCCAAGGCCGGGGTTCCCGGGGCCGGCGGAAGAGGCGCC
GCCGTGATGAGAGGTCCGATGGTGTCCAAGGTGATAACTCAGCTACTCCA
AGGCACTGACTGGGGAGAGCTAGAGTACCTTATTATCGACATGCCCCCAG
GTGATAACTCAGCTACTCCAAGGCACTGACTGGGGAGAGCTAGAGTACCT
TATTATCGACATGCCCCCAGGAACCGGCGACATCCAGATCACGCTTTGCC
AGGCTCTCCAGATAAGCGGGGCGGTCGTTGTGACCACCCCTCAGAAACTG
AGCTACGTGGACGTCGTGAAGGGCATCGATATGTTCGCAGCGCTCAGGGA
ACCGGCGACATCCAGATCACGCTTTGCCAGGCTCTCCAGATAAGCGGGGC
GGTCGTTGTGACCACCCCTCAGAAACTGAGCTACGTGGACGTCGTGAAGG
GCATCGATATGTTCGCAGCGCTCAGGGTGCCGATCCTCTCGGTCGTGGAG
AACATGGCCTACTTTGACTGCAACCACGGAGAGCGACATCGACCTTTTGG
CCCGGGCCACGTCGACCGGCTTGTCGAAGAGTGCGGGATCGGCCGCGAGA
GCGTGTTCCGCCTCCCGCTCAGCCCCGCGGTGGCGGCCGGTAGCGACGGC
GGTGACCCCGTGGCGTTGTCCGATCCCCGAGGGGAGGAAGCGCAGGTGCC
GATCCTCTCGGTCGTGGAGAACATGGCCTACTTTGACTGCAACCACGGAG
AGCGACATCGACCTTTTGGCCCGGGCCACGTCGACCGGCTTGTCGAAGAG
TGCGGGATCGGCCGCGAGAGCGTGTTCCGCCTCCCGCTCAGCCCCGCGGT
GGCGGCCGGTAGCGACGGCGGTGACCCCGTGGCGTTGTCCGATCCCCGAG
GGGAGGAAGCGCAGGTGTATTTGTCTCTCGCTGATGCTGTGGTTCGGGAG
GTGTACCGTGCAGCGGAAGTCACCGCCGACATCCCCCTCAGGTGTATTTG
TCTCTCGCTGATGCTGTGGTTCGGGAGGTGTACCGTGCAGCGGAAGTCAC
CGCCGACATCCCCCTCAGGTTTCCTTTAAGCCCGAGCGAGGGCTGGTGCT
GCGCTACATGTCCGAGCAAGAGGCGGCGGAGTACGTTATCCCTCCTTTCC
AGGTTTCCTTTAAGCCCGAGCGAGGGCTGGTGCTGCGCTACATGTCCGAG
CAAGAGGCGGCGGAGTACGTTATCCCTCCTTTCCAGCTGACTGA
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