mRNA_F-serratus_M_contig1514.3544.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI) HSP 1 Score: 149 bits (377), Expect = 5.610e-40 Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALYST 273
+QRIAIARAI++NP ILLLDEATSALDNESEKVVQEALD+LQ +QKRTTLTVAHRLTTIRNSDKIAVLN GGVQELGTHDELLA K LYST
Sbjct: 1191 KQRIAIARAILRNPPILLLDEATSALDNESEKVVQEALDQLQAKQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYST 1281
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI) HSP 1 Score: 149 bits (375), Expect = 1.040e-39 Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALYST 273
+QRIAIARAI+ NP ILLLDEATSALDNESEKVVQEALD+LQ +QKRTTLTVAHRLTTIRNSDKIAVLN GGVQELGTHDELLA K LYST
Sbjct: 1102 KQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAKQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYST 1192
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: A0A6H5JWI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI0_9PHAE) HSP 1 Score: 137 bits (344), Expect = 5.870e-37 Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 1
Query: 22 RAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALYS 270
RAI++NP ILLLDEATSALDNESEKVVQEALD+LQ +QKRTTLTVAHRLTTIRNSDKIAVLN GGVQELGTHDELLA K LYS
Sbjct: 308 RAILRNPPILLLDEATSALDNESEKVVQEALDQLQAKQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYS 390
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: A0A7R9WM24_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WM24_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.750e-33 Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALY 267
RQRIAI+RAI+ NP IL+LDEATSALDNESEK+VQ ALD LQ +Q RTTL VAHRL T++N KIAVL+ GGV+ELG+HDELL K LY
Sbjct: 101 RQRIAISRAIVSNPKILVLDEATSALDNESEKIVQAALDDLQEKQPRTTLVVAHRLGTVKNCTKIAVLDRGGVRELGSHDELLELKGLY 189
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: A0A7S0J429_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J429_9EUKA) HSP 1 Score: 118 bits (295), Expect = 7.820e-32 Identity = 61/90 (67.78%), Postives = 75/90 (83.33%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALYS 270
+QR+AIARA+++ P++LLLDEATSALDNESEKVVQ ALD + QKRTT+ +AHR++TIRN+D IAVL EG V E GTHDELLA LY+
Sbjct: 66 KQRVAIARALVRQPAVLLLDEATSALDNESEKVVQAALDSIMAAQKRTTVMIAHRISTIRNADLIAVLKEGAVLEQGTHDELLANLNLYA 155
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: K8Z129_NANGC (ABC transporter domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z129_NANGC) HSP 1 Score: 122 bits (305), Expect = 1.280e-31 Identity = 63/90 (70.00%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALYS 270
+QRIAIARAIIKNP+ILLLDEATSALD+ SEK+VQEALD L +KRTT VAHRL+TIR +DKIAV+++G V+ELG+H+EL+AR+ +Y+
Sbjct: 72 KQRIAIARAIIKNPAILLLDEATSALDSHSEKIVQEALDNLARSKKRTTFVVAHRLSTIREADKIAVIDKGQVKELGSHEELMARQGIYA 161
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: A0A1V9YIR4_9STRA (ATP-binding Cassette (ABC) superfamily (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YIR4_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.720e-31 Identity = 63/89 (70.79%), Postives = 78/89 (87.64%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALY 267
+QRIAIARAIIKNP ILLLDEATSALD+ESEKVVQEALDKL T++ RTTL +AHRL+TIR++DKI V+++G + E GTHDEL+ + +Y
Sbjct: 178 KQRIAIARAIIKNPPILLLDEATSALDSESEKVVQEALDKLLTEKGRTTLLIAHRLSTIRSADKICVVSDGCIAEEGTHDELVQKNGIY 266
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: A0A329SWJ2_9STRA (ABC transporter domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329SWJ2_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.780e-31 Identity = 59/90 (65.56%), Postives = 76/90 (84.44%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALYS 270
+QRIAIARAI+KNP+ILLLDEATSALD+ESEKVVQEALDK+ ++RTT+ +AHRL+TIR +DKI V++ G + E GTH EL+ K +Y+
Sbjct: 31 KQRIAIARAILKNPNILLLDEATSALDSESEKVVQEALDKVVALKRRTTIIIAHRLSTIRKADKICVVSGGNIAEQGTHQELIKLKGIYA 120
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: A0A818ZLH4_9BILA (Hypothetical protein n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A818ZLH4_9BILA) HSP 1 Score: 113 bits (282), Expect = 1.010e-30 Identity = 61/90 (67.78%), Postives = 77/90 (85.56%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLARKALYS 270
RQRIAIARA+I+NP ILLLDEATSALDN+SEKVVQ LD Q + RT +T+AHRL+TI+NS+KIAV+N G ++E GTH+ELLA++ LY+
Sbjct: 14 RQRIAIARALIRNPKILLLDEATSALDNKSEKVVQSTLD--QARVGRTCVTIAHRLSTIKNSEKIAVVNRGRLREEGTHEELLAKRGLYT 101
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.140e-30 Identity = 66/84 (78.57%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLTVAHRLTTIRNSDKIAVLNEGGVQELGTHDELLA 252
+QRIAIARAI++NP+ILLLDEATSALDNESE+ VQ ALD LQ+ Q+RTTL VAHRLTTIRN+DKIAVL G V+ELGTHDEL+A
Sbjct: 1119 KQRIAIARAILRNPNILLLDEATSALDNESERQVQAALDHLQSLQRRTTLVVAHRLTTIRNADKIAVLGTGAVRELGTHDELMA 1202 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1514.3544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1514.3544.1 >prot_F-serratus_M_contig1514.3544.1 ID=prot_F-serratus_M_contig1514.3544.1|Name=mRNA_F-serratus_M_contig1514.3544.1|organism=Fucus serratus male|type=polypeptide|length=92bp RQRIAIARAIIKNPSILLLDEATSALDNESEKVVQEALDKLQTQQKRTTLback to top mRNA from alignment at F-serratus_M_contig1514:5846..6746+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1514.3544.1 ID=mRNA_F-serratus_M_contig1514.3544.1|Name=mRNA_F-serratus_M_contig1514.3544.1|organism=Fucus serratus male|type=mRNA|length=901bp|location=Sequence derived from alignment at F-serratus_M_contig1514:5846..6746+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1514:5846..6746+ >mRNA_F-serratus_M_contig1514.3544.1 ID=mRNA_F-serratus_M_contig1514.3544.1|Name=mRNA_F-serratus_M_contig1514.3544.1|organism=Fucus serratus male|type=CDS|length=552bp|location=Sequence derived from alignment at F-serratus_M_contig1514:5846..6746+ (Fucus serratus male)back to top |