mRNA_F-serratus_M_contig1509.3527.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1509.3527.1
Unique NamemRNA_F-serratus_M_contig1509.3527.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 2.640e-110
Identity = 157/262 (59.92%), Postives = 192/262 (73.28%), Query Frame = 2
Query:   89 IMARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTGES-RFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTTFEEETSMSFRF 871
            +M R   V LAC ++G A  LEV  P  G + V+   YTVEW GTG + RFEIDLYYC S CMED+CGEWVT LCPYGE GCPD+ GDYD+ MPEPMSGTS  GYK+RVAD++DE S DCS+ F L+   + P+ S+A GP++ VTSP  GD AEA  EYTVE+DYD+G GS+ GRF IDLY A GSGDCGTF  TLCDK +IGCKD+ GDYDV  P D   G Y +RVG F+D++ +GCSD F +LG+    +++SMS+RF
Sbjct:    1 MMVRTGFVALACGMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGA----DDSSMSYRF 258          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 4.960e-110
Identity = 155/260 (59.62%), Postives = 187/260 (71.92%), Query Frame = 2
Query:   92 MARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTGESRFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTTFEEETSMSFRF 871
            MAR   V LACA++GAA  LEV  P+   I VAD  YTVEW G    RFEIDLY+CGS CMED CG+WVT LCPYGE GCPD+ GDYD+ MPEPMSG SN GYK+RV D++DE S+DCS+ F L+ SE+ P      G FL VTSP +GD AEA  EYTVE+DYD+G GS   RF+IDLY ADG GDCGT+  ++CDK SIGCKD+ GDYDV  P D   G+YK+RVG F+D+  +GCS TF ++G     ++ SMS+ F
Sbjct:    1 MARTGFVALACAMLGAANALEVVTPSADLIVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGG----DDESMSYDF 256          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 8.370e-109
Identity = 155/267 (58.05%), Postives = 190/267 (71.16%), Query Frame = 2
Query:   92 MARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTG-ESRFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTT------FEEETSMSFRF 871
            M R   V LAC ++GAA  L+V+ P++G   +AD  YTVEW GT  ++RFEIDLYYCGS CMEDDCG+WVT LCPYGE GCPD+ GDYD+ MPEPM GTS  GYK+RV DI+DE   DCS+ F LL S E P+V + DGP L VTSP  GD+A  C EYTVE+DYD+G GS+  RF IDLY ADG GDCGT+  ++CDK +IGCKD+ GDYDV  PCD + GEYK+RV  F+DD+ + CS TF +            E+  S+S+RF
Sbjct:    1 MTRTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTIEEGDDSDXXXXXEDAFSLSYRF 267          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 1.700e-105
Identity = 149/235 (63.40%), Postives = 177/235 (75.32%), Query Frame = 2
Query:  131 IGAAGDLEVTMPTEGSIYVADSLYTVEWQGTGES-RFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGS 832
            +GAA  LEV  P EG I VA   YTVEW GTG + R+EIDLYYCGS CMED+CG+WVT LCPYGE GCPD+ GDYD+ MPEPMSGTS  GYK+RVAD++D+ S DCS+ F L+   E P+  +A GP++ VTSP  GD AEA  EYTVE+DYD+G GS+ GRF IDLY A GSGDCGTF  TLCDK +IGCKD+ GDYDV  P D   G Y +RVG F+DD+ +GCSD F +LG+
Sbjct:    2 LGAASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGA 236          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 2.260e-100
Identity = 150/260 (57.69%), Postives = 182/260 (70.00%), Query Frame = 2
Query:   92 MARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTGESRFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTTFEEETSMSFRF 871
            MAR A   LA  ++GAA  LEV  P  G + VADS YTVEW G    R++IDLYYCGS CMED+CG+WVT LCPYG+ GCPD+ GDYDV MPEPM GTS+ GYK+ V D +DE+   CS  FTL+ S E P  ++  G ++ VTSP DGD A A  EYTVE+DYD+G GS+  RF IDLY + GSGDCGT+  T+CDK SIGCKD+QGDYDV  P    +G Y +RVGVF+DD  +GCSD+F ++G        SMS RF
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGDMVVADSAYTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS-GYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDM-GAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGGE------SMSVRF 252          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 2.270e-98
Identity = 153/260 (58.85%), Postives = 178/260 (68.46%), Query Frame = 2
Query:   92 MARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTGESRFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYE-ADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTTFEEETSMSFR 868
            MAR A   LA  ++GAA  LEV  P  G   +AD  YTVEW GT +SRFEIDLYYCGSFCMED+CG+WVT LCPYG  GCPD+ GDYD+ MPEPM+GTS+ GYK+ V D NDE+S+ CS  FTL+ S + P   E  G  L VTSP DGD A A   YTVEWDY++G GS+  RF IDLY    G+GDCGT+ ATLCDK SIGC D+QGDYDV  P D   G Y VRVGVF DD  F CS+ F ++      + T MS R
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGISVIADRTYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSS-GYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEV-GYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVN-----DRTDMSMR 253          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 1.220e-95
Identity = 148/260 (56.92%), Postives = 178/260 (68.46%), Query Frame = 2
Query:   92 MARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTGESRFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTTFEEETSMSFRF 871
            MAR A   +A  ++ AA  LEV  P  G   +AD  YTVEW GT   RFEIDLYYC SFCM+D CG+WVT LCPYG  GCPDSAGDYD+ MPEPMSGTS+ GYK+ V +  DE+ + CS+ FTL+ SE+ P   E  G  L VTSP DGD A A   YTVEWDY++GFGS+  RF +DLY   G+GDCGT+  TLCD+ SIGC D+QGDYDV  P D   G Y +RVGVFDD+  + CSDTF V  S    ++ ++S RF
Sbjct:    1 MARTAFAAVAFGMLSAANALEVVSPDGGISVLADRAYTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSS-GYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEM-GYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEVDTS----DDMTISMRF 254          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 1.210e-90
Identity = 130/208 (62.50%), Postives = 157/208 (75.48%), Query Frame = 2
Query:   89 IMARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTG-ESRFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDT 709
            +MAR   V LAC ++GAA  L+V+ P++G   +AD  YTVEW GT  ++RFEIDLYYCGS CMEDDCG+WVT LCPYGE GCPD+ GDYD+ MPEPMSGTS  GYK+RV DI+DE   DCS+ F L+ S E P+V + DGP L VTSP  GD+A  C EYTVE+DYD+G GS   RF IDLY ADG GDCGT+  ++CDK +IGCKD+
Sbjct:    1 MMARTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDS 208          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 3.920e-84
Identity = 134/260 (51.54%), Postives = 165/260 (63.46%), Query Frame = 2
Query:   92 MARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTGESRFEIDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTTFEEETSMSFRF 871
            MAR A   LA  ++GA   LEVT P  G + VA S  TVEW GT   RF+IDLYYCGS CMED+CG+WVT LCPYG+ GCPD+ GDYDV MPEPM GTS+ GYK+ V D +DE+ + CS  FTL+ S                                  +D+D+GFGS+  RF+IDLY + GSGDCGT+  ++CDK SIGCKD+QGDYDV  P D  +G Y +RVGVF+D   FGCSD+F ++G      E+SMS RF
Sbjct:    1 MARTAFAALAFGMLGAVNALEVTSPAAGDMIVAASSTTVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS-GYKVMVTDSSDESDMGCSGEFTLVASAXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIGG-----ESSMSVRF 253          
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Match: A0A6H5JEJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ8_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 7.580e-71
Identity = 111/191 (58.12%), Postives = 138/191 (72.25%), Query Frame = 2
Query:  272 MEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSNLGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDSIGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTTFE 844
            +ED+CGEWVT LCPYG  GCPD+ GDYD+ MPEPMSGTS  GYK+RVAD++     DCS+ F L+ S E P V   D P+L+VTSP  GD A+A  EYTVE+DYD+G GS   RF IDLY   G+GDCGT+   LCDK++IGCKD+ GDYDV  P  +  G Y +RVG F+DDA +GCS  F ++GS++ E
Sbjct:   12 VEDECGEWVTALCPYGSEGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDGPQDADCSDEFYLMASAEAPVVGGPDAPYLMVTSPSAGDKAQAGGEYTVEFDYDNGVGSRVDRFKIDLYSIGGTGDCGTWVMNLCDKEAIGCKDSMGDYDVEIPETVVDGMYSIRVGRFEDDALYGCSGEFEIVGSSSGE 202          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1509.3527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JFT9_9PHAE2.640e-11059.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYL2_ECTSI4.960e-11059.62EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5JRG9_9PHAE8.370e-10958.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI46_ECTSI1.700e-10563.40EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G3E8_ECTSI2.260e-10057.69Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
D7G3F0_ECTSI2.270e-9858.85EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JY62_9PHAE1.220e-9556.92GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
D7FH21_ECTSI1.210e-9062.50Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KP11_9PHAE3.920e-8451.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEJ8_9PHAE7.580e-7158.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1509contigF-serratus_M_contig1509:48156..51304 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons5
Model size880
Cds size789
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1509.3527.1prot_F-serratus_M_contig1509.3527.1Fucus serratus malepolypeptideF-serratus_M_contig1509 48156..51213 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929494.6030083-CDS-F-serratus_M_contig1509:48155..483251622929494.6030083-CDS-F-serratus_M_contig1509:48155..48325Fucus serratus maleCDSF-serratus_M_contig1509 48156..48325 -
1690962879.0813212-CDS-F-serratus_M_contig1509:48155..483251690962879.0813212-CDS-F-serratus_M_contig1509:48155..48325Fucus serratus maleCDSF-serratus_M_contig1509 48156..48325 -
1622929494.6170795-CDS-F-serratus_M_contig1509:48606..487421622929494.6170795-CDS-F-serratus_M_contig1509:48606..48742Fucus serratus maleCDSF-serratus_M_contig1509 48607..48742 -
1690962879.090326-CDS-F-serratus_M_contig1509:48606..487421690962879.090326-CDS-F-serratus_M_contig1509:48606..48742Fucus serratus maleCDSF-serratus_M_contig1509 48607..48742 -
1622929494.6332374-CDS-F-serratus_M_contig1509:49808..501051622929494.6332374-CDS-F-serratus_M_contig1509:49808..50105Fucus serratus maleCDSF-serratus_M_contig1509 49809..50105 -
1690962879.099905-CDS-F-serratus_M_contig1509:49808..501051690962879.099905-CDS-F-serratus_M_contig1509:49808..50105Fucus serratus maleCDSF-serratus_M_contig1509 49809..50105 -
1622929494.6490366-CDS-F-serratus_M_contig1509:50675..507571622929494.6490366-CDS-F-serratus_M_contig1509:50675..50757Fucus serratus maleCDSF-serratus_M_contig1509 50676..50757 -
1690962879.109872-CDS-F-serratus_M_contig1509:50675..507571690962879.109872-CDS-F-serratus_M_contig1509:50675..50757Fucus serratus maleCDSF-serratus_M_contig1509 50676..50757 -
1622929494.6623235-CDS-F-serratus_M_contig1509:51109..512131622929494.6623235-CDS-F-serratus_M_contig1509:51109..51213Fucus serratus maleCDSF-serratus_M_contig1509 51110..51213 -
1690962879.1225083-CDS-F-serratus_M_contig1509:51109..512131690962879.1225083-CDS-F-serratus_M_contig1509:51109..51213Fucus serratus maleCDSF-serratus_M_contig1509 51110..51213 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929494.6772354-UTR-F-serratus_M_contig1509:51213..513041622929494.6772354-UTR-F-serratus_M_contig1509:51213..51304Fucus serratus maleUTRF-serratus_M_contig1509 51214..51304 -
1690962879.131097-UTR-F-serratus_M_contig1509:51213..513041690962879.131097-UTR-F-serratus_M_contig1509:51213..51304Fucus serratus maleUTRF-serratus_M_contig1509 51214..51304 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1509.3527.1

>prot_F-serratus_M_contig1509.3527.1 ID=prot_F-serratus_M_contig1509.3527.1|Name=mRNA_F-serratus_M_contig1509.3527.1|organism=Fucus serratus male|type=polypeptide|length=263bp
MARFALVTLACAVIGAAGDLEVTMPTEGSIYVADSLYTVEWQGTGESRFE
IDLYYCGSFCMEDDCGEWVTTLCPYGETGCPDSAGDYDVEMPEPMSGTSN
LGYKIRVADINDEASVDCSELFTLLPSEEEPTVSEADGPFLVVTSPMDGD
MAEACMEYTVEWDYDDGFGSAAGRFNIDLYEADGSGDCGTFYATLCDKDS
IGCKDTQGDYDVAFPCDLNTGEYKVRVGVFDDDATFGCSDTFIVLGSTTF
EEETSMSFRFMF*
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mRNA from alignment at F-serratus_M_contig1509:48156..51304-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1509.3527.1 ID=mRNA_F-serratus_M_contig1509.3527.1|Name=mRNA_F-serratus_M_contig1509.3527.1|organism=Fucus serratus male|type=mRNA|length=3149bp|location=Sequence derived from alignment at F-serratus_M_contig1509:48156..51304- (Fucus serratus male)
GAAGAGCTACCGTTTTCTAAAACTCCGACGAAGTCTTTAGCAACTGCCTA TAATAGTCGCTCCAGGCAGATTTTTACAAAGTCTATAGATAATGGCTCGG TTTGCCTTGGTCACACTTGCGTGCGCCGTTATCGGTGCCGCGGGCGACCT CGAGGTCACAATGCCCACCGAAGGAAGTATATACGTTGCTGACAGGTGAG CTTTCCCCATATAGGTAAAATCGAGCAACGCGCGAACTCAAGCCATCATT ATAAACAGCGTCTGTTCGTGAAAGGTTTGTAGTTTATGCCGCTCTGTCCG CCGCGCCCTCGACTTTTTTTGTTCCGCCTCACAAAGAAAGGTCATTATTA TACCCTCTACCCTATACTGAGTCGTAAACATTTTCGACGCCACCTGTTTC CTTTCCTGCGAACTTTTATTTCCTTTGCTGCTGCTCTTGATGCATCTTTC GTCGATTTTCGTTTCGGCCACGATGCTGCTGCTACTCACACAACACTGTA CTGACTTATCATTGTGTGACTTGCCGAAAACGCGTAACCGAAAACAGCTT GTACACGGTGGAGTGGCAGGGCACCGGGGAGAGCCGGTTCGAGATTGATC TATACTACTGTGGCTCTTTTTGTATGGAGGTGAGCGCGTGCGTGATTCTT TGTTGTGAGTGCCGTTTGATGTAAATAAAAGAAATTGTAGCTTCGGAGAA CGAGCAGGCATCTCCGGCTGTTACGATCCCCTTCCGTCGTTGATGGCCGG TACAGTAGCAGCCCATGAGTAACGACCGTCTTGCGGCATAGTTTTCTCCG TCGTTTGCTTTCTGATTCAACAAGAAAGGTCTAGGTGCGTTCTGTATTTT TCTTCAAAAAAGAGGGCCGCACTACAAGTACTGTACCGAATAGACTACTC AGTCGGTATTTCTCTAAAGAGACCTCAACTACGTAACGTACTATCTTTGC TAGAGTTGCTTCAAGGACGAACTAAATAGCAACTTAAAGTACTACAATAA TAGCTCTGCTTCGCTCTTTACGATATTGGTCAAATATAATACTCGTTCAG TGTACTGTTTGTGCTGGACCAGGTACTAATGTACGAATCCCCTCAAATTT ATGCAATCGTTCGGATGGCAACACATATACCACTGTACGCCTTCTATCGT ACCCTTGACGTCAACAATCTCTGCAATTACGTTATCTCGTTCCTTCAAGG ACGACTGCGGTGAGTGGGTGACCACCTTGTGTCCCTACGGCGAGACTGGT TGCCCGGACTCAGCGGGCGACTACGATGTCGAAATGCCCGAGCCCATGTC TGGTACATCGAACTTAGGCTACAAGATCCGCGTGGCGGACATCAACGACG AGGCCAGCGTGGATTGTTCCGAGCTATTCACCCTCCTGCCGTCGGAGGAA GAACCGACCGTCAGCGAAGCGGATGGACCCTTCCTTGTCGTGACATCACC CATGGATGGTGACATGGCTGAGGCGTGCATGGAATACACTGTAGAGGTAA CATATATACAGTAGTCTATATCTCCATTTAATCTGGTGCTTATATAACGC ACCCAAATACCGGTACAGAACAGAAAACAAAACAGTATTATTTTATTATT AATAATCGTATCCTCTGCCTGTTGTGTTGTGTACCGCCTGTACTTACGCA CGGTGTTGCCTGGTTCTGTCTGGTGGACCATGACGTCGTGCTGAACTCCC ACAAACAAAACAATCTGATTCTCTTGGAACGCGTATTGGAATGGTAACCG CGTATACTGTAATGTATTTATTACTGGGTGTGGTTGAGGCCTGCCCGATC AGTAAAGGTGAAGGGCGGGTTCTGATTTTTATTCAACACGCATATGCACA GAGACGACATTTTGCCGATAAAAACCTACCAGTAGGTTTCTGATCGACTT TTTCTATACTGAAACTGTATATAACTATAATACTCGTAGAGACAGACAGA AGTTTCCCAGTCACAAGATATCAGAGATATCATACTGCACTGTTGAAGCG GTGTTCCTGTCATGTCATGTTGCATTAAGGGTGCGTGTCAACACTCTAGG GGTACCCGGTACGGTGAAAGTTGTCATTGATTGATTGCCCGCGAGATGAA CGAGGTTGAGCTTAGCAACCAGGACGGCCGGTTCGACGACCTCCGGAGAC GTAGTGCTCTTGACTTTCGACGACCAAACGGAACAGGGTATGGGAGCGGC CGAAGCGACTGTTGGTGTATCCTACCAACATGAATAGTCGCTCCAGCCGC TCCCATACCCTGTTCCGTTTAATCGTTGGAAATCAAGAGCGCGACGTCTC CGGCATCCACGAGTCGCCGGAGGACGTCGAACCGGCCATCCTGGTGGCTA CGCTTAACCTCGTCGATCTCGTGGGCTATCAATCAATGACAACTTTACAC CGTACCGGGTACACGATTCACTATTTTTAAGCACAGTTACTATACTACTG TATAGGTAATACCCTCCGGTTCTGGTGTTGGTGCCTATTCGACATACCTG GCATGTACGTATCATGGGCGCGGTCTCCCTAACCCACCTCGATTGTCCAT TTTTTCTGGCAGTGGGACTACGACGACGGATTTGGTTCAGCTGCAGGCCG CTTCAATATCGATCTGTACGAGGCCGACGGCTCAGGAGACTGCGGGACTT TCTACGCTACGCTCTGCGACAAGGATTCTATCGGTTGCAAGGACACACGT GAGTTTGCAATAAATCAGTCCATATATTTATATTATCAGTATAGACTAGA CTAATATGAACATGTACCGTAATAGTATAGTATAGTACTATAGTACTCAT TCCTATTTTTGTATACTTGGGTTCAAACTTGTGTTTAAAGAAAAATCAAC AGCAGCTGTGATCGTTCGTCAATTTCTCGAACGTCGGCTGTTATTAAAAT TGCGAGTGCCCTTCGCCAGAGCTCCCCCTTGCTGATTGTCATTGCCCCTT ACCGCATTAATGTGTCGCTTTTGTCGCAGAGGGCGACTACGACGTTGCTT TCCCATGCGACCTCAACACGGGAGAGTACAAGGTCCGAGTTGGAGTCTTC GACGACGACGCCACATTCGGCTGCTCGGACACCTTTATCGTCTTGGGTAG CACGACCTTTGAAGAGGAGACGAGCATGTCGTTCAGGTTCATGTTTTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1509:48156..51304-

>mRNA_F-serratus_M_contig1509.3527.1 ID=mRNA_F-serratus_M_contig1509.3527.1|Name=mRNA_F-serratus_M_contig1509.3527.1|organism=Fucus serratus male|type=CDS|length=1578bp|location=Sequence derived from alignment at F-serratus_M_contig1509:48156..51304- (Fucus serratus male)
ATGGCTCGGTTTGCCTTGGTCACACTTGCGTGCGCCGTTATCGGTGCCGC
GGGCGACCTCGAGGTCACAATGCCCACCGAAGGAAGTATATACGTTGCTG
ACAGATGGCTCGGTTTGCCTTGGTCACACTTGCGTGCGCCGTTATCGGTG
CCGCGGGCGACCTCGAGGTCACAATGCCCACCGAAGGAAGTATATACGTT
GCTGACAGCTTGTACACGGTGGAGTGGCAGGGCACCGGGGAGAGCCGGTT
CGAGATTGATCTATACTACTGTGGCTCTTTTTGTATGGAGCTTGTACACG
GTGGAGTGGCAGGGCACCGGGGAGAGCCGGTTCGAGATTGATCTATACTA
CTGTGGCTCTTTTTGTATGGAGGACGACTGCGGTGAGTGGGTGACCACCT
TGTGTCCCTACGGCGAGACTGGTTGCCCGGACTCAGCGGGCGACTACGAT
GTCGAAATGCCCGAGCCCATGTCTGGTACATCGAACTTAGGCTACAAGAT
CCGCGTGGCGGACATCAACGACGAGGCCAGCGTGGATTGTTCCGAGCTAT
TCACCCTCCTGCCGTCGGAGGAAGAACCGACCGTCAGCGAAGCGGATGGA
CCCTTCCTTGTCGTGACATCACCCATGGATGGTGACATGGCTGAGGCGTG
CATGGAATACACTGTAGAGGACGACTGCGGTGAGTGGGTGACCACCTTGT
GTCCCTACGGCGAGACTGGTTGCCCGGACTCAGCGGGCGACTACGATGTC
GAAATGCCCGAGCCCATGTCTGGTACATCGAACTTAGGCTACAAGATCCG
CGTGGCGGACATCAACGACGAGGCCAGCGTGGATTGTTCCGAGCTATTCA
CCCTCCTGCCGTCGGAGGAAGAACCGACCGTCAGCGAAGCGGATGGACCC
TTCCTTGTCGTGACATCACCCATGGATGGTGACATGGCTGAGGCGTGCAT
GGAATACACTGTAGAGTGGGACTACGACGACGGATTTGGTTCAGCTGCAG
GCCGCTTCAATATCGATCTGTACGAGGCCGACGGCTCAGGAGACTGCGGG
ACTTTCTACGCTACGCTCTGCGACAAGGATTCTATCGGTTGCAAGGACAC
ACTGGGACTACGACGACGGATTTGGTTCAGCTGCAGGCCGCTTCAATATC
GATCTGTACGAGGCCGACGGCTCAGGAGACTGCGGGACTTTCTACGCTAC
GCTCTGCGACAAGGATTCTATCGGTTGCAAGGACACACAGGGCGACTACG
ACGTTGCTTTCCCATGCGACCTCAACACGGGAGAGTACAAGGTCCGAGTT
GGAGTCTTCGACGACGACGCCACATTCGGCTGCTCGGACACCTTTATCGT
CTTGGGTAGCACGACCTTTGAAGAGGAGACGAGCATGTCGTTCAGGTTCA
TGTTTTAAAGGGCGACTACGACGTTGCTTTCCCATGCGACCTCAACACGG
GAGAGTACAAGGTCCGAGTTGGAGTCTTCGACGACGACGCCACATTCGGC
TGCTCGGACACCTTTATCGTCTTGGGTAGCACGACCTTTGAAGAGGAGAC
GAGCATGTCGTTCAGGTTCATGTTTTAA
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