mRNA_F-serratus_M_contig1494.3401.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1494.3401.1
Unique NamemRNA_F-serratus_M_contig1494.3401.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A6H5KDB2_9PHAE (PAPS_reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDB2_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 3.480e-179
Identity = 253/314 (80.57%), Postives = 274/314 (87.26%), Query Frame = 3
Query:   57 MKTSTVFLSIVV-GVNGFVPLVPSFSGRVVAPSSST-ATQH-PLSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 989
            MKTS   LS++  G N FVP+ P  S R    SS+T A QH P+ MGLNPELAANFPRDF+ IPKGTDYGEGKDA +NK+FEE R+  LE QL +SL  V   KKNP+FTTALIAGDCVILDAIAKAGLLDKI+VVF+DT+FLFPES+DFLHE+E+HYGFKA +YHC DC TQQ+FYDKYGEDYWMEDID YDKKCKVEPLMRALKE +TEAWINGRRRDHGFERAALP+WEG KFNPLAFWSFEDCWTYLR HNVPYHPLHDVGFSSLGDMQSTRKV PLE WFSYGGERSGRFEGMKNKDGSEKTECGIHSK
Sbjct:    1 MKTSLAMLSLLAAGANAFVPVAPVLSTRASVSSSATSAMQHVPMRMGLNPELAANFPRDFAAIPKGTDYGEGKDAEMNKLFEEVRMSNLESQLADSLAKVVAEKKNPIFTTALIAGDCVILDAIAKAGLLDKIKVVFVDTYFLFPESLDFLHEVEEHYGFKASIYHCADCETQQDFYDKYGEDYWMEDIDQYDKKCKVEPLMRALKEAETEAWINGRRRDHGFERAALPVWEGTKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKV-PLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 313          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A835Z3Q9_9STRA (Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Q9_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 8.060e-154
Identity = 224/313 (71.57%), Postives = 253/313 (80.83%), Query Frame = 3
Query:   57 MKTSTVFLSIVVGVNGFVPLVPSFSGRVVAPSSSTATQHPLSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK*K 995
            MKT+ V L  V+G      +  + S   +A  SS A   PL MGLN EL   FPRDF+ IP GTDYG G DA LNK  EE RI +LE  +M SLK + EVK  P+FTTALIAGDCVILDA+AKA LLD++ VVFIDT+FLFPES++FL E+E HYGFKAKVYH  DCATQ+EFY+KYGEDYWMEDID YD KCKVEPL RAL+E +T+AWINGRRRDHGFERAALP+WEG K NPLAFW+FEDCWTYLR H VPYHPLHDVGFSSLGDMQSTRKV PL+KWF+YGGERSGRFEG+KNKDGS KTECGIH++ K
Sbjct:    1 MKTAAVSLLAVLGYAQAFVVPSAVSSHSLATRSSAA---PLRMGLNAELTKTFPRDFTKIPTGTDYGTGVDAELNKREEEARIQYLEDSMMASLKKMMEVKTKPMFTTALIAGDCVILDALAKAQLLDRVDVVFIDTYFLFPESLEFLRELEAHYGFKAKVYHAADCATQEEFYEKYGEDYWMEDIDQYDLKCKVEPLQRALREAETDAWINGRRRDHGFERAALPVWEGNKVNPLAFWTFEDCWTYLRKHKVPYHPLHDVGFSSLGDMQSTRKV-PLDKWFTYGGERSGRFEGLKNKDGSNKTECGIHTEIK 309          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A835YS08_9STRA (Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS08_9STRA)

HSP 1 Score: 453 bits (1166), Expect = 1.440e-150
Identity = 221/310 (71.29%), Postives = 253/310 (81.61%), Query Frame = 3
Query:   66 STVFLSIVVGVNGFVPLVPSFSGRVVAPSSSTATQHPLSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK*K 995
            +   L+++ G + FV +  +   R  + S+       LSMGL+P LA  FPRDF+ IP GTDYG G DA LNK  E +RI +LE  L E+LK V++VK+ PVFTTALIAGDCVILDAIAKAGLLDKI V+FIDTFFLFPES++F+ E+E HYGFKAK YH  D ATQ+EFY+KYGEDYWMEDID YD KCKVEPL RAL+E +T+AWINGRRRDHG ERAALP+WEG K NPLAFWSFEDCWTYLR HNVPYHPLHDVGFSSLGDMQSTRKV PLEKWF+YGGERSGRFEG+KNKDGS KTECGIH++ K
Sbjct:    5 TAALLALLGGASAFVSVPHTAITRYESRSA-------LSMGLSPTLAKTFPRDFTKIPTGTDYGTGVDAQLNKEDEASRIAYLEQSLAETLKKVSQVKERPVFTTALIAGDCVILDAIAKAGLLDKIDVIFIDTFFLFPESLEFIEELEQHYGFKAKRYHAADVATQEEFYEKYGEDYWMEDIDQYDLKCKVEPLQRALRETNTDAWINGRRRDHGAERAALPVWEGTKVNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKV-PLEKWFTYGGERSGRFEGLKNKDGSLKTECGIHTEIK 306          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A4D9D472_9STRA (PAPS_reduct domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D472_9STRA)

HSP 1 Score: 442 bits (1138), Expect = 2.270e-146
Identity = 202/271 (74.54%), Postives = 228/271 (84.13%), Query Frame = 3
Query:  177 LSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 989
            +SMGLN EL   +PRDF NIP GT YG+G+D+ LNK  E+  ++FLE QL   LK   E+KK P+FTTALIAGDCV+LD IAKAGLLDKI +VFIDTFFLFPE++DFL E+E+HYGFKAKVYHC DC TQ+ FYDKYG DYWMEDID YD KCKVEPL RALKE  T+AWINGRRRDHG ERA+LP+WEG K NP+AFW+FEDCW YLR HNVPYHPLHDVGFSSLGDMQST KV PLEKW +Y GERSGRF+G+ NKDGS KTECGIH+K
Sbjct:   38 VSMGLNAELTKTYPRDFKNIPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKV-PLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A7S3XUP3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUP3_HETAK)

HSP 1 Score: 420 bits (1080), Expect = 1.840e-137
Identity = 196/281 (69.75%), Postives = 232/281 (82.56%), Query Frame = 3
Query:  153 SSTATQHPLSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK*K 995
            S +A   PL M L+  L   +PRDF+ IP GTDYGEG+D  LNK  E T++DFL  QL E+LK   E+KK P+FTTA IAGDCV+LDAI KAGL+DK+ ++FIDT+ LFPESI FL EIE+HYGFKAKVYH EDC TQ+ +Y+KYGEDYWMEDID YD KCKVEPL RAL+E D++ WINGRRRDHG ERAALP+WEG K NPLAFW+FEDCW+YLR ++VPYHPLHDVGFSS+GD+QSTRKV   + WF+YGGERSGRFEG+KNKDGS KTECG+H++ K
Sbjct:   42 SRSAPAGPL-MALDATLCEKYPRDFATIPFGTDYGEGQDEVLNKEIENTKLDFLTAQLTETLKKAVEMKKRPIFTTAEIAGDCVLLDAIHKAGLIDKVEIIFIDTYHLFPESIAFLKEIEEHYGFKAKVYHAEDCETQEIYYEKYGEDYWMEDIDAYDMKCKVEPLQRALREHDSDCWINGRRRDHGAERAALPVWEGTKLNPLAFWTFEDCWSYLRKYDVPYHPLHDVGFSSMGDVQSTRKV-DHKVWFTYGGERSGRFEGLKNKDGSAKTECGLHTEIK 320          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A6U2BYW2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2BYW2_HEMAN)

HSP 1 Score: 321 bits (823), Expect = 2.540e-99
Identity = 168/324 (51.85%), Postives = 223/324 (68.83%), Query Frame = 3
Query:   54 TMKTSTVFLSIVV---GVNGFVPLVPSFSGRVVAPSSSTATQHPLSMGLNPELAANFPRDFS--------NIPKGTDYGEGKDAA--LNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHS 986
            TM+T+ + +S+       + F+P +PS    +V+ S +          L+P  +A FPR  S        ++   T   + K+A   LNK  E++R+ +LE QL+  LK  AE  +NPVFTTALIAGD VIL  I KAGL DKI+VVFIDT+ LFPE+++FL  +E HYGFKA  Y  +DCA+ +EF +KYG+D ++ED+++YD+  KVEPL+R LKE  T+ W+NGRRRDHGFERAAL +WE +K NPLA+W+FEDCW Y+R   VPYHPLHD G+ SLGDM ST +V   +KWF YG ER+GRF+ M+N DGS KTECGIH+
Sbjct:    3 TMRTAILLISLAFLLQSAHAFLPCLPSPIPPLVSRSQT----------LSPS-SAPFPRYTSPRFRPLSLSLSMST---KAKEATKELNKENEKSRLAYLEEQLLSDLKNAAERFENPVFTTALIAGDDVILHGINKAGLFDKIKVVFIDTYHLFPETLEFLETVEKHYGFKALRYAPKDCASPEEFEEKYGDDLFLEDVEEYDRLAKVEPLLRGLKENKTKLWVNGRRRDHGFERAALEVWEDEKMNPLAYWTFEDCWKYIRAEGVPYHPLHDDGYPSLGDMHSTLRV-DKDKWFQYGMERAGRFQNMQNADGSPKTECGIHT 311          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A7S0Z0Y0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Y0_9CRYP)

HSP 1 Score: 314 bits (804), Expect = 4.420e-97
Identity = 145/237 (61.18%), Postives = 185/237 (78.06%), Query Frame = 3
Query:  276 LNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHS 986
            LN   E  R+ +LE QL+  LK+ AE  +NPVFTTALIAGD VIL AI KAGLLD+I+V+FIDT+ LFPE+++F+ ++E HYGFKA  Y  + CA+ +EF +KYG+D ++ED+++YD+  KVEPL+R LKE  T+ WINGRRRDHGFERAAL +WE +K NPLAFW+FEDCW Y+    VPYHPLHD G+ S+GDM ST +V   +KWF YG ER+GRF+ M+N DGS KTECGIH+
Sbjct:   36 LNSEHERNRLAYLEKQLLSDLKSAAEQFENPVFTTALIAGDDVILHAIHKAGLLDRIKVLFIDTYHLFPETLEFMDKVEGHYGFKALRYGPKGCASPEEFEEKYGDDLFLEDVEEYDRLAKVEPLLRGLKENKTKLWINGRRRDHGFERAALEVWEDEKMNPLAFWTFEDCWNYIHAQGVPYHPLHDDGYPSVGDMHSTLRV-DKDKWFQYGMERAGRFQNMQNADGSAKTECGIHT 271          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: L1J678_GUITC (PAPS_reduct domain-containing protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J678_GUITC)

HSP 1 Score: 304 bits (779), Expect = 3.900e-93
Identity = 141/236 (59.75%), Postives = 181/236 (76.69%), Query Frame = 3
Query:  279 NKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHS 986
            NK+  E+R+ +LE Q ++ L       +NPVFTTALIAGD VIL  + K+GLL K+++VFIDT  LFPE+++FL ++E  YGFKA +Y  E C T++EF +KYG+D ++EDI+ YDK  KVEPL+RAL+E  T+ WINGRRRD GFERAAL +WE +K NP+AFW+FEDCW Y+  H VPYHPLHD G+ SLGDM ST +V   EKWF YG ER+GRF+ M+N DGS+KTECGIH+
Sbjct:   67 NKLHLESRLKYLEQQAIDDLILAVAKYENPVFTTALIAGDDVILHILHKSGLLPKVKIVFIDTLHLFPETLEFLEKVEKFYGFKAVIYKAEGCETREEFDEKYGDDIFIEDIETYDKVAKVEPLLRALRESKTKLWINGRRRDQGFERAALEVWEKEKMNPIAFWTFEDCWKYIEQHKVPYHPLHDDGYPSLGDMHSTLRVEK-EKWFLYGMERAGRFQNMQNPDGSDKTECGIHT 301          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: D8QN92_SELML (PAPS_reduct domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QN92_SELML)

HSP 1 Score: 266 bits (680), Expect = 1.320e-78
Identity = 131/237 (55.27%), Postives = 165/237 (69.62%), Query Frame = 3
Query:  294 ETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDK--IRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKF---NPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 989
            E R+  LE Q    L+   E  + P F  ALIAGD V+LD + K G  +K  ++V+FIDTF LFPE+  FL  +ED YGFKA+V+H  D  T++E+  K+G D ++ DID+YDK CKVEP  RAL     +A INGRRRDHG ERA L + +  K     PLA+W F DCW+YL+ ++VPYHPLHD G+ S+GD+QST  V P EKWF YGGERSGRF+G+ NKDGS KTECGIHS+
Sbjct:   75 EARLQHLESQAKSVLQKTIECFERPAFPCALIAGDVVMLDLLHKIGAFEKEAVKVIFIDTFHLFPETYTFLKSLEDKYGFKARVFHAADFNTKEEYLAKHGSDLYIRDIDEYDKICKVEPFNRALSSLQVDAMINGRRRDHGAERAHLEVAQAGKMVNVQPLAYWEFRDCWSYLKKNSVPYHPLHDKGYPSIGDVQSTLPV-PKEKWFEYGGERSGRFQGLSNKDGSLKTECGIHSQ 310          
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A2R6X602_MARPO (PAPS_reduct domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X602_MARPO)

HSP 1 Score: 262 bits (670), Expect = 6.110e-77
Identity = 124/241 (51.45%), Postives = 165/241 (68.46%), Query Frame = 3
Query:  279 NKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLD--KIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEG---QKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHS 986
            NK   + R+  LE Q + +L+   E  + P F  ALI GD VILD +++ G  D  K++++FIDT  LFPE++ FL  +E  YG KA ++     A +QE+ +KYG D ++ D+D+YD+ CKVEP  RALK  + +A +NGRRRDHG ERA L ++EG    K  PLA+W F DCW Y+  + +PYHPLHD G+ S+GDMQST  V P  +WF YGGERSGRF+G+KNKDGS KTECGIH+
Sbjct:   84 NKQVRDERLSILETQALNALRKTIENYQRPAFPCALITGDVVILDLLSRVGAFDDEKVKIIFIDTLHLFPETLTFLAAVEKRYGCKAHIFQAAGMANKQEYDEKYGSDLFIRDVDEYDRICKVEPFSRALKTLEVDAMVNGRRRDHGAERAHLEIFEGGDMAKVQPLAYWEFRDCWDYIEKYQLPYHPLHDQGYPSIGDMQSTLPV-PKSQWFEYGGERSGRFQGIKNKDGSTKTECGIHA 323          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDB2_9PHAE3.480e-17980.57PAPS_reduct domain-containing protein n=2 Tax=Ecto... [more]
A0A835Z3Q9_9STRA8.060e-15471.57Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonem... [more]
A0A835YS08_9STRA1.440e-15071.29Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonem... [more]
A0A4D9D472_9STRA2.270e-14674.54PAPS_reduct domain-containing protein n=2 Tax=Mono... [more]
A0A7S3XUP3_HETAK1.840e-13769.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U2BYW2_HEMAN2.540e-9951.85Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0Z0Y0_9CRYP4.420e-9761.18Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
L1J678_GUITC3.900e-9359.75PAPS_reduct domain-containing protein (Fragment) n... [more]
D8QN92_SELML1.320e-7855.27PAPS_reduct domain-containing protein n=2 Tax=Sela... [more]
A0A2R6X602_MARPO6.110e-7751.45PAPS_reduct domain-containing protein n=3 Tax=Marc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1494contigF-serratus_M_contig1494:76866..90544 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score525.8
Seed ortholog evalue1.4e-146
Seed eggNOG ortholog2880.D7FUM6
KEGG rclassRC00007,RC02862
KEGG koko:K00390
KEGG ReactionR02021
KEGG Pathwayko00920,ko01100,ko01120,map00920,map01100,map01120
KEGG ModuleM00176
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.phosphoadenylyl-sulfate reductase (thioredoxin) activity
EggNOG OGsCOG0175@1,KOG0189@2759
Ec32 ortholog descriptionPhosphoadenylyl-sulfate reductase (thioredoxin)
Ec32 orthologEc-26_002130.1
EC1.8.4.10,1.8.4.8
COG Functional cat.EH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons8
Model size2577
Cds size936
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1494.3401.1prot_F-serratus_M_contig1494.3401.1Fucus serratus malepolypeptideF-serratus_M_contig1494 78451..90488 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929472.3793936-UTR-F-serratus_M_contig1494:76865..784501622929472.3793936-UTR-F-serratus_M_contig1494:76865..78450Fucus serratus maleUTRF-serratus_M_contig1494 76866..78450 -
1690962868.8997493-UTR-F-serratus_M_contig1494:76865..784501690962868.8997493-UTR-F-serratus_M_contig1494:76865..78450Fucus serratus maleUTRF-serratus_M_contig1494 76866..78450 -
1622929472.5208528-UTR-F-serratus_M_contig1494:90488..905441622929472.5208528-UTR-F-serratus_M_contig1494:90488..90544Fucus serratus maleUTRF-serratus_M_contig1494 90489..90544 -
1690962869.0222275-UTR-F-serratus_M_contig1494:90488..905441690962869.0222275-UTR-F-serratus_M_contig1494:90488..90544Fucus serratus maleUTRF-serratus_M_contig1494 90489..90544 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929472.3931344-CDS-F-serratus_M_contig1494:78450..785611622929472.3931344-CDS-F-serratus_M_contig1494:78450..78561Fucus serratus maleCDSF-serratus_M_contig1494 78451..78561 -
1690962868.9100065-CDS-F-serratus_M_contig1494:78450..785611690962868.9100065-CDS-F-serratus_M_contig1494:78450..78561Fucus serratus maleCDSF-serratus_M_contig1494 78451..78561 -
1622929472.4051363-CDS-F-serratus_M_contig1494:78884..790131622929472.4051363-CDS-F-serratus_M_contig1494:78884..79013Fucus serratus maleCDSF-serratus_M_contig1494 78885..79013 -
1690962868.9199712-CDS-F-serratus_M_contig1494:78884..790131690962868.9199712-CDS-F-serratus_M_contig1494:78884..79013Fucus serratus maleCDSF-serratus_M_contig1494 78885..79013 -
1622929472.4185922-CDS-F-serratus_M_contig1494:79318..794871622929472.4185922-CDS-F-serratus_M_contig1494:79318..79487Fucus serratus maleCDSF-serratus_M_contig1494 79319..79487 -
1690962868.932614-CDS-F-serratus_M_contig1494:79318..794871690962868.932614-CDS-F-serratus_M_contig1494:79318..79487Fucus serratus maleCDSF-serratus_M_contig1494 79319..79487 -
1622929472.4332027-CDS-F-serratus_M_contig1494:82294..823711622929472.4332027-CDS-F-serratus_M_contig1494:82294..82371Fucus serratus maleCDSF-serratus_M_contig1494 82295..82371 -
1690962868.9514482-CDS-F-serratus_M_contig1494:82294..823711690962868.9514482-CDS-F-serratus_M_contig1494:82294..82371Fucus serratus maleCDSF-serratus_M_contig1494 82295..82371 -
1622929472.4509943-CDS-F-serratus_M_contig1494:82730..828831622929472.4509943-CDS-F-serratus_M_contig1494:82730..82883Fucus serratus maleCDSF-serratus_M_contig1494 82731..82883 -
1690962868.9680054-CDS-F-serratus_M_contig1494:82730..828831690962868.9680054-CDS-F-serratus_M_contig1494:82730..82883Fucus serratus maleCDSF-serratus_M_contig1494 82731..82883 -
1622929472.4671044-CDS-F-serratus_M_contig1494:83252..833211622929472.4671044-CDS-F-serratus_M_contig1494:83252..83321Fucus serratus maleCDSF-serratus_M_contig1494 83253..83321 -
1690962868.9790602-CDS-F-serratus_M_contig1494:83252..833211690962868.9790602-CDS-F-serratus_M_contig1494:83252..83321Fucus serratus maleCDSF-serratus_M_contig1494 83253..83321 -
1622929472.4851437-CDS-F-serratus_M_contig1494:83955..840061622929472.4851437-CDS-F-serratus_M_contig1494:83955..84006Fucus serratus maleCDSF-serratus_M_contig1494 83956..84006 -
1690962868.9992492-CDS-F-serratus_M_contig1494:83955..840061690962868.9992492-CDS-F-serratus_M_contig1494:83955..84006Fucus serratus maleCDSF-serratus_M_contig1494 83956..84006 -
1622929472.5075347-CDS-F-serratus_M_contig1494:90311..904881622929472.5075347-CDS-F-serratus_M_contig1494:90311..90488Fucus serratus maleCDSF-serratus_M_contig1494 90312..90488 -
1690962869.0118165-CDS-F-serratus_M_contig1494:90311..904881690962869.0118165-CDS-F-serratus_M_contig1494:90311..90488Fucus serratus maleCDSF-serratus_M_contig1494 90312..90488 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1494.3401.1

>prot_F-serratus_M_contig1494.3401.1 ID=prot_F-serratus_M_contig1494.3401.1|Name=mRNA_F-serratus_M_contig1494.3401.1|organism=Fucus serratus male|type=polypeptide|length=312bp
MKTSTVFLSIVVGVNGFVPLVPSFSGRVVAPSSSTATQHPLSMGLNPELA
ANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEV
KKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHE
IEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMR
ALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRT
HNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDG
SEKTECGIHSK*
back to top

mRNA from alignment at F-serratus_M_contig1494:76866..90544-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1494.3401.1 ID=mRNA_F-serratus_M_contig1494.3401.1|Name=mRNA_F-serratus_M_contig1494.3401.1|organism=Fucus serratus male|type=mRNA|length=13679bp|location=Sequence derived from alignment at F-serratus_M_contig1494:76866..90544- (Fucus serratus male)
GGTTGCAGCATACTCCTACACAAAGATCTTAGGGCTACTTTGTACGGAGA CCAACAATGAAAACATCAACTGTATTTTTAAGCATAGTGGTGGGAGTTAA TGGGTTCGTTCCTCTTGTCCCGTCATTCAGCGGGCGCGTCGTCGCACCGT CCTCCTCGACCGCGACTCAGCATCCCTTGAGCATGGGACTGAACCCCGAG CTGGCTGCGAATTTCCCGCGAGACTTCTCCAACGTAAGAGCTAGTAAGCA GAGTTGCTATCGCGGCGGTGACTCTAGTGTAGAGTAGCTGAGAGGCCATG TTTCCTTTAGTTTCATCCGAATATTTCACCTTACAAATATGTGCTTGTAC ATGAAGGGCCTATGAGGAAGAAACATTCGAGGTCATCATGCTCGTTTCGG TCCTTTTTTTCAATATCATGAACCAGTAATCCTCCGAAGGAAAGATGCTA AACGCCGACCTGCTGAAGTAATTTTGTGAAAATGCAACCCAACACCAGCT CCATGCTATCATACCTATCCTACTTAGATACCGTATTCCACATGAAAGTC TAGATAGAAATCGAGGAGACCCTGGCGCAGCCTCTGGCGCCTTTAGCATC ACACTCCCTATCCAAAGCTTCGATCTTGCTGTGTGGCAACCCTTCCTTTG GTTAACACTCGATGTGTTGTGTGATAAGGTTAACTTTCAGTCCTTATAAC AGTTGTTAGCTAGATGCACCGAGTTGACGGGGTATTGTCCGCGAAAACAC CCGCGGGCGGAAATGATTGAAAACTTTGCGAGTACTGTACTCTGATGCTC GAACCCGCAGGAGACAGACCTACTACTTTATTAGCGTACTCTAAAAACAT TTCCTGCGCATGAACTTTATATAATAGTACAAACAAAATCGAAAGTTCTT GCGATGAAAGTTGGCCAGGTTGAGATTGAAATCGCGATTTCAAACCTCCA TTTCCTTCCCCAGGAATAAGCCTCGACAGCCACCGAGTGAAAACCGTAAT CCAGCTGAGGGCGGTGGTGACCGCGTTGGTGTGTGAGGGGAGGGTGACCG ACGAAATAGACAGCTGCGTGATCCAGAGAATTGCCAACGACCGTCCTGGT TGACATGGTAGCAATGATACGCCGACAGTCCCGGGTGAAGAGTGCTCACA ACGACGAAACACGGGCAAAAAGAAGGAACAGCACTTCATTTTTTTTATGT TTGTCGCCGCCGCCGCTGTGGCGTTCTCCTGCAGCAGCTGCTGCTGGAAG GGATGTACTCGACGTGTTCGTGCCATGCTAGAGATGACAGCAGAACCGTG AGGTCGAAGTGACTCGCGTCGAGCGTCGGCGGTGCGCGTCATCCCACGCC CGGACTGCAACACATCAATGTGAATAGTTATCCTCGAGGATTCTCGACGA CCCAGTATCACGAAAAGCGAAGCTCTCGTTTATTTATACCACCTTACCTA GGGTTCCAGATTCAGAAAACTGGTCGTCAGTAATACAAACATTAACATTT TAGACCCACCTCTTATCGTATCAAAAAAAGCACTACTGTTGTAGCACCAA TATTTCGTAATATAGTTTCTCCCAATAGCAAGATACCGGTAAAATACTGT CTAAAAAGCTTCTGCTAAACTGTTTTGTACTGATAATGTGATGTTTCTCC TAACTACTTAGCTCTAAAAGACACCATTCCTCGGATTAAAAAAAAATGTC CATCTACCCATACACCCCCGATGACTGTGCAAACATACACCCCCGATGAC TGTGCAATCAATAGTAGCCTAACCCTGTTTATTACCAATAATATTTACCC GGTACTTACTCGGTATATCATATTCGCCCATTTTCGAGCCATTCACTGTA TTTATAGTCTATATTGCTGTTCATAGGACTCGTACTCTGTATCTTTGTTC CGGTGTTTAATAAAGAAAAATTTGAATGCATCTATAGACCTTATAGACTA AACGGAGTAGTTGTTCTTTAAGGACTAAATTGGTAAATGTTACATTCGAC TCCGATCCGCCAATACTTGAACCCGATCCCCCACCCAAACACTTGAATCC GGTCCCAATCCACTATCGCACAGCTGGGTTGTATCCAAGGTCCATCGTGT GTATTTGCCTCTGTTTTCGTGTACCTGCATGTTATGTAGCAATTAATATT AATGGAAGTATATGTTTACACATGTAGCAAGAGTAAGAATCAACCGGGTA AGGTTGGCAATCCTTCTCGTGTTCAGCTGAACGGGGAAAATGTTTTTTTC CCTGTCCCCGTTTGCGCCTGAGAATTTGGTCTCGCGAGACGGTTTCGACA GTCCCGTCCCGCGTGAGCATGCTCATCTCCATACTCAGGCTAAATCTGGT GCTTACTTATGGGATTCCTACCGCGTTCCGCGGCGGCGTCCATTTGTTTA GTAAAGCATAACGATGAGATTCTCCCCGAGATCATACTGTTTACCCCCGA TGCAACCAACATTGGGGAACCTGTTTAAGTCTCATGAGTGTCTTTGTCCT TGCAGCTATAAATGATATTCTCACCTTAGCGTTTTGACGTGTTTTCCCTT ACTGGGTAGTTGCTAGTTGCTGAGAAGTTTTACAGATTCGATCATATTTT TCTTTTAAAATCGTGGTAGTTTTTGGGTCCCGGAAATATCTAACTTTTCC TCTCGGAAATTCTTCGCGAACTTTTATGACCCCTTATCATGGCGGCCAAA AATTCCGGTTAAAACCAGCTCGGGGGCCGCACTTTTACGGTTGGTATTTC TGACCAGATTGAAATTTTTGCACCGATTATCCGGATTTCCAGTCGAGATT TTCTGGTTCGACCTTCCGAACGGACTTCTGGCCCTTTGTTCCACTTTTCA TTCCCGACCAGAAGTGGCAAAGTGCGGCGCAACCTTTCCACCTCTACCAA CCAGCCCCACGTATTTGCAGCCTTTGATCTCCACCCAAACGTTTTGACAT TTCCCCCCCCCTAACCGAGGGATGCTCAGAAGGTCTAGGTGCGTTCTGAT TTTTCTTCAAACACCATTACGGTATATGCATAAAACGACATCATCAGCAG TGACCCTCGAGGCAGATATGGCAGGTGGAGTTCGGCTTCTATTTGTATCC GGCTCCACAGCAGTGACCCTCGAGGCCGATACGGCAGGTGGGGTTCGGCT TCTATTTGTATCCGGCTCCACAAAAATCCGAAGGAAGAAGTGACGAATTT CAATGACCACAACAACGCTTCACTGCGCCCACCCCCAAAAAATTACTCCA GAAATGTATAATTTTTGGCTCCCATAAAAAAATGGTCTTACGCTCATGTA CAACAGTGCTGTGAATACAGTCTTCATATAAAAGTCATCCTGGATATCAT ACAGCACCTATTACCGTAATGGAAGGTCCATTATAATACTATAACACTAT AGCTATATATACAAGTGTACTAAGGTACACAGTGTTGCTGTACCGTACGA GTTATATTTTCGTGAATCATAAATATTAATAGCACTTAGTAATACCAGGG TAACAAGTACAATGCTCTGTGTGTTTGGCTGTCTACCTGCTGTAAAGCTT TCTCTCGAACCCGGCGGTCGGTTTCGAACCCGGCGGTCGGTACCACGACC ACCTTACTTTTCAACCATCCGACCCTCCAAAAAAATGTTTCCGCTTTAAG ACTCGGACCTCGAGAAAATAAAAATAAAACTCTCGAGCTCTTTTGAGTGT AATCCGAATAGTAGGCGCCGCATGAGACCACTTGTCGTGGAACCCTCAAA AATGGGATTTCTGGGGTAATGAAGAGTCCTTATAGTCACATAAGTTCGTG ATTTCTGTGTTATGGATTTCTGGGGGCGCAGGGTTTTTTAGTGCTGACTC GAAGAAATGCACCTATTACACAAAAAATTGTTCTCGCAGTTTTGCCAACG CCATTCCAAGTGACTACAAAACAGTGCGATGCTTCTGCTGCGTTGTTCGT TTGCTGCCCGACCATGCACACCCTGAGTGTCGTTTACGCCGCGTTGTCGA TCCACAACCCAACCACAGGCGGCAGAGGAGAATCTTAAACCCTGCTCGAG AGTGCTAGGAAAGTCTTGAGACAAACAGCACACGTACACATGCGAGTGAT TGTACCCCTTGCCAGGGCCGCACCTGGTGGGACGGACTGTGTCCCCTCTA GACGACGGTAGTGCATTCCGAAACACGGAGAATACTGTATAAGAGGGGTA AAGCAGCTCACGGTGAGCGTTGCAACTGCCGCCTAGACAGCGAAGATACT CACTAATGCTCAAAGAGGCGTTGCAGGGCTCAGGCGCACGCGCAGCATCA TCTCAGTCGAGGTCGATCTGTTGGCTTATTGTTGGCTATGGACATGGCGT AGAGCGTTCAAACGCTTGTTTCGTTTTCTCCTCAGTTACCCCGAGATGCA ACGATACAAAACAAAAAAATGTATAGTACAACAGTAGGACTCCGTAATGT GGACGCTGTACGCTGGAGGTCAGCAACAAACAAGGTTACAGTACCTGTAG ATCTCCCACACAGAGAGAAGCTGTTAAATAGCTCCTACACGCGGGGGCCA AAGCAGCTCTTTTTAGGCATTCCTCTGCCGTTTCGACAGTCATTATACTA CGTACAGCGGTAGTAGTTGGTTAGAGGCGCCGCAGGACATAAGCGGACAC AGCACCATCTCAGTCGAGGTCGAGCAGCAGCTGTTCGGAGGCATTCAGAC ACTCTTCCACTTTTTTTTTCTGTAGATACCTACAGAGGACTTAAGTATCA CATATGGGTATTGGTTAAGTAAGGATAGTCCCCTCCGATTTCCCTGGATT TCCCTTGAAGATTTTTTGTTCTAATTTTTGTAAAAAACAAATGCTAGAAA AAGTTAAATATTTTGGGGGGCATTGGAAATACTTTTTTTTTTGTTCTATT TTTTGTAAAACCATAAAAAGTAGTGATCTAAGGATATCGCGCCTACAATT TCATAGCATTTCTGTTTCGAACTTGGAACCAACCGCCTTAGAGAGTCGAC AAGCTATCCAATAGCGACTTTTTGATTTCTTGCGTTCGTAAACCTGTACA GCGGATTTATTTGTTTTTTATAATCGGGCCGATTTCAAATCAAACGACTA TGATGACAAACGATGACAAACGGCGAGCGTTTTCAACCTTCCGAACATGC CACCTTCCGGGGAAAACGCCGTCATACGGTCTGAGTGGTGGGTACATTGA CTGTTAGAACTGCACCTGGCTTTATGCATGGGGTTGACATGAGTTCCCCA ATGATATTTCTCATTGGGGGTCAACCGTTTAGTGTCGGGGAGAAGAAGTC CGCCATATCGTGCAGTACACTTACTCTAATCGCCATATTCATGGAGGAAT AAAATAAAATAAATAAAACACCAAGGCAGGAAATAGGGAAATACGGTCAA GAGCATTGTTTGGATCCGAAGTTTCTTTGAAAATTCTGGTATTTGGTTCA CGTTGAGTTTCAGTCGTCCACCTCGTCTCGGTACTGTATCGGTATTTGTT ATTTGGTTCTTGAAACTGACAGTCTCGTTGCGAAGAAAACAACAATCGCT CTCGGACGAAGCGTGCCTTACACCTGGAACGCAACGTAGTGCGTACAAAG ATCGCGCAGGAGGCAGCGACAAAAATTGGGACAAAAGTACTGTGCGCTTC GTGTAACTAACTGTATGTATGTATGTATCGAAACTAATGTTCAACTTTCG GGCAACACTGGAAACACAGCAGCGGCGAGTGGACCGACTGACTGTTGCTC TTATGGTACATGTACTCCACGTTATCGCGACATTTCCTTTTTCCTTTTTT TTTTTTTTTTTTCATCTCACTTATAGCCGATGGGCCTCATTCCATCCTGC CTGTGGTCACTAAGGATCTTCCCATCTCTCCCCGGTTCACGCCTTACGAG TTTTGATCGCGATGCAAGTTCAGCACTCTTACAACTCGTTAACCAATGGT TGAATCTTACCTACTCACGTTCTCACGCTTTCCGCTACGGAAGCAAGAAT TAAAAAATCTGATTTAACCAAGAATCGAACTCACGACCTCCGCACTAGCA GGTGTGCAGGTTACCTACTAGACCACTTTTTAAAGCTTGAAAAGCCACGA TGCGTGTAGCATCATCACGACAGCTGTAGCGGTCGCCTCGACCCGATGGC TTGCAGACAGCTGAGGATACCCTTGATTAAAAATAAAAATAAAAATTGCC CGTATTCATATAATAGCAGTCATGAAAGCCGCTCGGAAGCTCAAGGCTCT TCACCTCTTTGAAGGATTTGCGCTGCAGTTCAACAGCGAGGAGTGCATCG AACCCCCCCCGAGTCGAGTTTTTTTTTCTTCTTATGGATTGCACGCGTAT GAGCCCGCCTTTCAATGAGTATCGTTATCCTACTGACACCAAACAAGAAA ACTCTAATAGCATCTACTTATAATAGATGGATGTTCACTCTCACGTACAT GTATTTTTCGTGTTTTACCTGGCAAACTCGACTCGTCACGCTCGACGCAT AAGACTGCGACTACCACGTTTCCACACCCCGCCCGCAGATCCCCAAGGGC ACCGACTACGGCGAGGGCAAAGACGCCGCTCTCAACAAGGTGAGGGCTGC AGTGCTCTGCGCATATTTGGTCGGGTTGTCATCCGCCGCGCACCGGCACA CTATTTTAAAACTCCGAGGGGAAAAGGCTTCATTACGATCCTCCACGTTG ATAAAATAAAATTGCGCTTCATAGCCTACGATGTGCTGCTGTGACCTAGG CTTTGACTTTCCCGACCATCTTGAAGGCGTGTACCTGACCCCCCCCCTCA TTTCTTTCCCCATCGATCATTCTCTAATAATATTTAATAGTTGGGACTCG AAAACAAGTGCGCAAGACTCTTGTCAAGATTCGGACCAATCAAACCGCTG AAATATATGATTACGAACCAGTTTGCGTGGTCACCTGAAAATGCGAAAAG GGTTCCCCGGTATAGCCTCGCAGGCCACGCACACACCCGGCTAGAGCTAC GAAGCTACTCAGAATACGGACCATGTGTTGCGTGACCACCTGACGGCGAA AAGAACCCCCGTTGTCATAGTCTTTAGCGGTCCACAGCCCAGCCAGTACG ACGTGCTGCTGTGACGTTGGCCTTGACTTTCCCGACCATCTTGAAGGTGT GTACCTGATCCCCCCCCCCCCTCCTTCCTCTCCCCATCGATAATTCGATC ACTCTTTTTCTCGTCTACGGCAGGTATTCGAGGAAACTCGCATCGATTTC CTGGAGCATCAACTTATGGAATCCCTCAAGGCAGTCGCTGAGGTAGGGTG ATCTTCGGGTGAAGCTGAAACCTGTCTTGTGACATTTGGGGAGAAATACA GAAATGCTTAAGGAAAGGGAGCAAGCACAACGCGTGAATTGCTCGGAATG TTTCGGAGTTCCATTCCTCGGCATTTACGCCTCCTTGGTCTTTTTGCGTA GTGGTGCGGGGTAAACGCCGAGCGGGCTCGTTGGGTATGTACTATTAAAA TATTTACTATGGACTTTACTTGGGACTCTTGCAATATATGTGGGTGTGAA AATATTCGTAACCTTGTCTAAAAGGTACACCTTATCTACGACTGGCGTGC ACCCTCTCGTGCACTGTCATCACCTTGTGCGCGTTTGCCCCGTTTACGAA CGCCTCGACAGGTGAAAAAGAACCCGGTATTTACCACGGCACTGATCGCC GGCGACTGCGTTATCCTCGACGCGATCGCCAAAGCGGGTCTTCTGGACAA GATCCGGGTGGTCTTCATCGACACCTTTTTCCTCTTCCCCGAAAGCATCG ACTTCCTCCACGAGGTAATGCAGATAATCTCCAGAGGAACGTCGACCCTC TTGCCGAAGTAGATTAAATCGGCTTGGAGTATAACGACACGGAGAATATG ATGACAGTACATACTCCCCCTTCGTCGCTCTGTCGTACATGCGTGCCCAG GCGATGCCCATATTTAGAGACTTTGGTCCTCAAAGTGGATGGGGGGAGGG GAGGTGTATGTGGTCATCACACTTTTGGCTGATTGGGTTCACTTGTATGG TTGGCTCACCCCACCGCCCTCGTCTATGAGAGGTGCGTCTGCTAGAGGCA GCACTTCGGAGCCCTGGTTATGGCTGCGGAGAATCTAACGTCCAATCAAT GGTCGTGGTTTTTGTCTGTCCAGATCGAGGATCACTATGGCTTCAAGGCC AAGGTGTACCACTGCGAGGACTGCGCCACGCAGCAAGAATTCTACGATAA GTAAGTTTCATATACAGAGCTACATATAATATATATATTATATCCATGTT TTTTGCGGAGAGCGCGCTGGTACGGACGGTGGTTGAACCAGACAGGTATC CCCCGAAAAAGACATGTGTGTTGGTAGAAAATTCCAATTATCCTGAGGCA CGTCCGCCTCCCGAGAGAGAGAAAGAAAATGGCACGCATCGATTGTGGCG AGCCTCCCTGCCAACATCTCCTGGCCGAAGCTGGAAGCGTGTGCGGTAGC GCCCGTGCCTACCGAGCGACCCTCGCGAGGCAACACTCCTACCGTACCAC ATTTGGCGTCAACGAGGACGGTGATTCTCGTCTTCGAGGCAACCTTTCAG GATGCCAGTGAAGCAGCAGCCGGGAGAATGGGAGACACCCTCAGCTTCGA AGAAAAAGAAGCTTAAAGTCTCCAAACCTCCAACGGTGCCAGGACACACG TCTGAAGCCCCCGCCACCAAAGGCTCCGGCCCTCGCGGAACGTCCACTGC TGCTGTTGAACCCAATGCCCCTACGGTGATAACCACCGCATCGCCGGCTG CCATACCGAAAGTTATTACTTAGACTTATCTTGGCATTCCTGCAGCAGGC GCAACGCACGTCCCTTACTACAGCCATGCACATGGAACACCGTTCTTACT TAAGCGTTTGAGCGACACATAAGACTGCCTACCAATATCATGGGTACTCC CGATGCTGAAAGATCCGCTAGCTCGGAGAAATTTGCCCTCTCAGCACGAG AGAATCCTCAGGTCGTTTGAACTGGTAAGACGGAACCGAACTGAACAAAC GGGCTAACACCAGGTTACCAATTACGTAGCGATGGCGTCCGCGGTACTTT CAACATGCCCACTCCATACCAATAGTGGGTATGGGAAAAGAAGCGCATAT TAATTGGTTCATGGTGACCTGCCAAGGCGGCACCCGCTTGGAACTACCTT GAGGTTTACTGGCCCTTTGCCGGCGGACTCTGCGCAGTGAATGCCATCGG TACGCAATTGCGTGACCCGATAAACTCGGGACTGACCCGATGGCGCATGG CGGTTTAAATAAATAAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCG TAAGTAAGCACCAGAGTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCG GGACGGGACTGCTGAACCCGTCTCGCAAGACCAAATTCTCAGGCGCGAAC GAGGACAGGGAAATATTGAAATATTCATTTTCCCGGTTCAGCTGACCACG AGCAGGATTGGCAACCTTACCCGGTTGATCCTTACCCTTGCTATATGTGT GGCCATATACATACTACCGAGAGTCCGCCGGCACAGGGCCGGTAGTCCTC AAGGTAGTTTGAGTAAATGGTGCTATCCTTTCAGGTATCACCATGGACTA TGACCAATTTTTCCGCACCTCTCTTTTCCGATACCCTTTAAACATTATTG ATTGGTATGTAGTGGACCTGTGTGGTACAAAACGTATCGGAGGCGAACAA TACTACTATTACTATTAATAGCGGGTTAGCGACAGTACTGTGTACAGTAT ATCATATCAGCTCGGTGAACAACGAGGAGGTGACAGCAGTGGAGAAAGGG CAGCCCTGCACGAGATCATCAATCTGGCGATAGCCGCCGAATGAGTTTTC GGTGGCAAGCGATTGCTTTGAGATAGGCACTGATGAGGTCCAACAAACCT AAACGCGCGAAGACTCGGTTAATCCTTGACCGTGGCACCTTGAGTACCTC GAGACTCAAGCTTGGTGGAAGGCGCTGCAGGACCCGGGGCTACAAGCGCC GTCCTCCTGAGACGCCACTTGGTTCAGCGAGTGCTTCCGCGTCCCGGCAC CAGTTCTTCCCTTCTACCATCAGTCTTGCGTGTTATTCGCTCAAGCCTTG GGAGAAGGACTCCGATAGCAGACTCACGATTCCTCCTTGGTAATGGATGC TACATGTCTCAATGACGCCTGTAGGCGACGACCGCCAAAACGTAGTGCCG ATGGCGTATGACGGTATAAACAAATAAATGGATGTCGCCCCGGAAATCGG GAGAAATCCCGTCAGTAAGCGCCGGATTCAGCCTGAGCGCGGAGAATGAG CAGGCTGACGCGGGACACAACGGCCAAATCCGTCTCGCGAGACCAAATTC TCAGGCGCGAACGGGGACAGGGAAATATTCATTTTCCCTGTTCAGCTGAC CACGAGCAGGATTGGCAACCTTACTCCCGGTTGAACTGTACTCTGCTGAA TAGGATGACGATATATACATACATTTGTAATGTCTTCGATTTTCATCCGT CCGACTCCCTTTTGCGACCCCTCGGCAAAGTTCTTTGGCCGTTTGATTTA TCGGCCGTTACTCCAGTACGGAGGCCGTCTTCGTATACCTCCTGGTCAAC CTTGTATCACGACACGGGGACTAACTGTTGACCGTGCCACGGAAAAATGC AAACAATGATTGGAAACCCAGGCCCATGAAAGAACGAGCCCAGCACAGCA GTCGTCACTTCTCAACTGCATTTTGGAAAATGTTGTCTTTGGAAGTGACT AGAGCAACATACCTCCCTAGATTACCCTACACCGCAAGTGGCAGTTGCCA CCGCACCTCCCGGGCATGATCTTGACGTGATATATATTTATATATATATA TAATTTGTACATTTGAACCAGAGTTATATAGGTTCCGGGTTCGGCTTCGG TAAAACTCAAGCTCGCGAGCTATTGGACGAACGTGCGTGGGCTTACTTAT CCCGATGGCACGCCATCAGCGATTTTGTGCTCCATATGTGCGTCCATCTC GTGCAAGGTACGGCGAGGACTACTGGATGGAGGACATCGACGATTACGAC AAGAAGTGCAAGGTGGAGCCGCTGATGCGCGCGCTGAAAGAGGGCGACAC GGAAGCGTGGATCAACGGCCGCCGCAGGGACCACGGCTTTGAGCGAGCCG CTCTGCCGCTGTGGGAGGGGCAAAAGGTGAGGCAAGGGTATGCGTAAAGA CTGCATTTGACGTGCATTATACCTGTTCGAAAGTCTGTTGTTTTTTTGGC GGCCGTAAAACCGGAAACAAGCGATTTACGGTGGGTGAAGACGCGGAGGC CGCCGACCCGCTATCGCAGATTAATACCAAGCAATAGTTCACGGGGTAGC TCGTGTCGCGGCGCGCCTATCCCTACGTCATCCTTCAGATCGCTTCTCCC GTCCTGTCCACCGCAAACGTTGAACGTGATTATCGTGTGTTTAATTTGCC CTCGCGCACCGCCTTCCCCCCCTTGTGGCAGTTTAACCCGCTTGCGTTCT GGTCCTTTGAGGACTGCTGGACCTACCTTCGCACGCACAACGTGCCCTAC CACCCGCTCCACGACGTAGGCTTCTCGTCCTTGGGCGACATGCAGAGCAC TCGCAAGGTGGTGACATGACTCTGTTTCCGCTTTCTTGTTATTAATAGTA TTAATAGTGTGTTGACACCGCGAGAGTGGTTGGAACGAATTCTCACCCGT TCGCTCGATGTTTGGATCCTCCTTCGCAATGCGGGCGTTTCACTGTGGTA CTTCCCCAGTAATTCCCAGAGTTCATGTCTTCCCACGTGCTCGGTGGTTT ACCCTGACCGTGTTGTAAGTTTGAGCGATCGAGCGACCCGTTTTGTGCCC ACTACCCCCCCCCATCCGATATGTAAGACATCGAAATTTCGCGTTCGTGT TGTCAACGCGCACTCCATCGCCGATGCGTACAGGTGCCTCTCGAGAAGTG GTTCAGCTACGGCGGCGAGCGTTCCGGGCGATTTGAGGGCATGAAGAACA AGGACGGCTCCGAAAAAACAGAATGCGGAATCCACAGCAAGTAGAAAAGA TTCGCCGTCGAACCCCTCGTCCCACATTTGCTCTCGCAATGCGACGGACA AATCAGTCGTCAGATTTTTAAGGAAGATTTCTTGAAAAAGTTATTCCGTT TTGCCTCTTTTTCAATCGGCTTCAGCTGCGGTGCGCGTCGCGCAGGCGTG TGTGCCACTACTACTCGTCGTTATCGTTGAAAGATCTACTGCTGTCTTGT ATCGGCCGTTTTCCTCCGAGAGATGCATGTGACGTGATGCGCCGGAAGGG CTTCGGACATTTTGTGTATGTCGCGCGCGTGTCTGATGCTTTTTAGCGTA CCAGGGTAAGTTTTTTGGGGGCCGAAATCAAAACAAAATAATATGTCTAT GCAGGCTCCATCATTAGGCTGTTGGGGAGCGACTGGTTGGTGCCTGTCGC TCTTGATGTTTCAGCGAAGTTTGTTTCGCACATACTGTGCCATGGTAGAT ATGTAGAGCATTAGACGTATGTAGAGAGAAGAAGAAAAAAACACCCAAAT GGCGTTTTCAATCGATGGCAAGCTACTCTCGGAGCTTAGATCAGCGGGGA GGGAGTGCTCAAAAGCCGAGTTCACCAGTCGCGGAAGATTTTAAAGCAAC GGGCGGGGAAGACGAGATCTCCTTCGAAAAAGTATGCAAATTAGGGAAAA CAACATGCATTCCACGCGGTGTCAACTTAAGCGGCACGGCGCTGGCGCAA TCGGCCGTTAAAATTACGGTTCTCCCGTCAAGGGCACGTTGATCATTATA TTTGCAAGTAGTGTGATTTTTGCGACAGGTGGCACAGAAGAGTCATTTCG ATGGGTGAGCACGCCGATTATGTATAATCGTCGTGCGCATACTGCGTACT CGTAACGAGAAGTGTAACCGAAAAAACGTTTATCGGCAGTTTTCACGCCT CACGTTAAGAGCATTTACTATTACTACTACTACTATTGTTTTGTACACAC ACTCGTTTTTGCATTTCCCGCCTGTGATGCTTCGAGAATAATTGCTTTCC AAATGATTTTCTGCTCTCTTTCCTCGCACAGGCGTCACGAAGGGCGCGGC TCCCGTATTTTTTCCCCCAAAAGAAATGTTATAGACTAGGACAGCCATAA CGCCAGTGAGAGTGGAGTCGGGGTGCTAAGGAACGCTGAAACCAGGGGTA GGGTTCGACCAAGCGAGTGTATCGGGGGTGGCACGCTACCGCCTTTCAAA TTGGGATGCAAAAAGCGAGTCCCACAGCGCTGACTGATCACAGGGAAGGA AAAACCGCCTTGGCTTGGGGTGAACTCGGAACCGGGCAGCGCCCGATGTA TTACCACTTTAACTTTTGAAGTCAGCGCTGATGGGTTGTTCAGTTCAGGG GTAATGTGCCGACCTTGAAAAAACATGCCGGTAAACCCGTATATTAGGTG TGCGTCAACTTTTTATGCGTTTTTCCCGGGCGATCATTCCAAGAAGTTAT TCGTAGTATGCGCATTAGTTTGCCTCGTACTACAAGTAACTAAAATTCCG CTATTTGTACACTTAATATAAACGTGGTATGATTATACTGTTAATGATGT GTCTCCCCCCGACAATTTATGGTTGCCCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1494:76866..90544-

>mRNA_F-serratus_M_contig1494.3401.1 ID=mRNA_F-serratus_M_contig1494.3401.1|Name=mRNA_F-serratus_M_contig1494.3401.1|organism=Fucus serratus male|type=CDS|length=1872bp|location=Sequence derived from alignment at F-serratus_M_contig1494:76866..90544- (Fucus serratus male)
ATGAAAACATCAACTGTATTTTTAAGCATAGTGGTGGGAGTTAATGGGTT
CGTTCCTCTTGTCCCGTCATTCAGCGGGCGCGTCGTCGCACCGTCCTCCT
CGACCGCGACTCAGCATCCCTTGAGCATGGGACTGAACCCCGAGCTGGCT
GCGAATTTCCCGCGAGACTTCTCCAACATGAAAACATCAACTGTATTTTT
AAGCATAGTGGTGGGAGTTAATGGGTTCGTTCCTCTTGTCCCGTCATTCA
GCGGGCGCGTCGTCGCACCGTCCTCCTCGACCGCGACTCAGCATCCCTTG
AGCATGGGACTGAACCCCGAGCTGGCTGCGAATTTCCCGCGAGACTTCTC
CAACATCCCCAAGGGCACCGACTACGGCGAGGGCAAAGACGCCGCTCTCA
ACAAGATCCCCAAGGGCACCGACTACGGCGAGGGCAAAGACGCCGCTCTC
AACAAGGTATTCGAGGAAACTCGCATCGATTTCCTGGAGCATCAACTTAT
GGAATCCCTCAAGGCAGTCGCTGAGGTATTCGAGGAAACTCGCATCGATT
TCCTGGAGCATCAACTTATGGAATCCCTCAAGGCAGTCGCTGAGGTGAAA
AAGAACCCGGTATTTACCACGGCACTGATCGCCGGCGACTGCGTTATCCT
CGACGCGATCGCCAAAGCGGGTCTTCTGGACAAGATCCGGGTGGTCTTCA
TCGACACCTTTTTCCTCTTCCCCGAAAGCATCGACTTCCTCCACGAGGTG
AAAAAGAACCCGGTATTTACCACGGCACTGATCGCCGGCGACTGCGTTAT
CCTCGACGCGATCGCCAAAGCGGGTCTTCTGGACAAGATCCGGGTGGTCT
TCATCGACACCTTTTTCCTCTTCCCCGAAAGCATCGACTTCCTCCACGAG
ATCGAGGATCACTATGGCTTCAAGGCCAAGGTGTACCACTGCGAGGACTG
CGCCACGCAGCAAGAATTCTACGATAAATCGAGGATCACTATGGCTTCAA
GGCCAAGGTGTACCACTGCGAGGACTGCGCCACGCAGCAAGAATTCTACG
ATAAGTACGGCGAGGACTACTGGATGGAGGACATCGACGATTACGACAAG
AAGTGCAAGGTGGAGCCGCTGATGCGCGCGCTGAAAGAGGGCGACACGGA
AGCGTGGATCAACGGCCGCCGCAGGGACCACGGCTTTGAGCGAGCCGCTC
TGCCGCTGTGGGAGGGGCAAAAGGTACGGCGAGGACTACTGGATGGAGGA
CATCGACGATTACGACAAGAAGTGCAAGGTGGAGCCGCTGATGCGCGCGC
TGAAAGAGGGCGACACGGAAGCGTGGATCAACGGCCGCCGCAGGGACCAC
GGCTTTGAGCGAGCCGCTCTGCCGCTGTGGGAGGGGCAAAAGTTTAACCC
GCTTGCGTTCTGGTCCTTTGAGGACTGCTGGACCTACCTTCGCACGCACA
ACGTGCCCTACCACCCGCTCCACGACGTAGGCTTCTCGTCCTTGGGCGAC
ATGCAGAGCACTCGCAAGGTGTTTAACCCGCTTGCGTTCTGGTCCTTTGA
GGACTGCTGGACCTACCTTCGCACGCACAACGTGCCCTACCACCCGCTCC
ACGACGTAGGCTTCTCGTCCTTGGGCGACATGCAGAGCACTCGCAAGGTG
GTGCCTCTCGAGAAGTGGTTCAGCTACGGCGGCGAGCGTTCCGGGCGATT
TGAGGGCATGAAGAACAAGGACGGCTCCGAAAAAACAGAATGCGGAATCC
ACAGCAAGTAGGTGCCTCTCGAGAAGTGGTTCAGCTACGGCGGCGAGCGT
TCCGGGCGATTTGAGGGCATGAAGAACAAGGACGGCTCCGAAAAAACAGA
ATGCGGAATCCACAGCAAGTAG
back to top