mRNA_F-serratus_M_contig1494.3401.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A6H5KDB2_9PHAE (PAPS_reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDB2_9PHAE) HSP 1 Score: 527 bits (1357), Expect = 3.480e-179 Identity = 253/314 (80.57%), Postives = 274/314 (87.26%), Query Frame = 3
Query: 57 MKTSTVFLSIVV-GVNGFVPLVPSFSGRVVAPSSST-ATQH-PLSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 989
MKTS LS++ G N FVP+ P S R SS+T A QH P+ MGLNPELAANFPRDF+ IPKGTDYGEGKDA +NK+FEE R+ LE QL +SL V KKNP+FTTALIAGDCVILDAIAKAGLLDKI+VVF+DT+FLFPES+DFLHE+E+HYGFKA +YHC DC TQQ+FYDKYGEDYWMEDID YDKKCKVEPLMRALKE +TEAWINGRRRDHGFERAALP+WEG KFNPLAFWSFEDCWTYLR HNVPYHPLHDVGFSSLGDMQSTRKV PLE WFSYGGERSGRFEGMKNKDGSEKTECGIHSK
Sbjct: 1 MKTSLAMLSLLAAGANAFVPVAPVLSTRASVSSSATSAMQHVPMRMGLNPELAANFPRDFAAIPKGTDYGEGKDAEMNKLFEEVRMSNLESQLADSLAKVVAEKKNPIFTTALIAGDCVILDAIAKAGLLDKIKVVFVDTYFLFPESLDFLHEVEEHYGFKASIYHCADCETQQDFYDKYGEDYWMEDIDQYDKKCKVEPLMRALKEAETEAWINGRRRDHGFERAALPVWEGTKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKV-PLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 313
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A835Z3Q9_9STRA (Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Q9_9STRA) HSP 1 Score: 462 bits (1188), Expect = 8.060e-154 Identity = 224/313 (71.57%), Postives = 253/313 (80.83%), Query Frame = 3
Query: 57 MKTSTVFLSIVVGVNGFVPLVPSFSGRVVAPSSSTATQHPLSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK*K 995
MKT+ V L V+G + + S +A SS A PL MGLN EL FPRDF+ IP GTDYG G DA LNK EE RI +LE +M SLK + EVK P+FTTALIAGDCVILDA+AKA LLD++ VVFIDT+FLFPES++FL E+E HYGFKAKVYH DCATQ+EFY+KYGEDYWMEDID YD KCKVEPL RAL+E +T+AWINGRRRDHGFERAALP+WEG K NPLAFW+FEDCWTYLR H VPYHPLHDVGFSSLGDMQSTRKV PL+KWF+YGGERSGRFEG+KNKDGS KTECGIH++ K
Sbjct: 1 MKTAAVSLLAVLGYAQAFVVPSAVSSHSLATRSSAA---PLRMGLNAELTKTFPRDFTKIPTGTDYGTGVDAELNKREEEARIQYLEDSMMASLKKMMEVKTKPMFTTALIAGDCVILDALAKAQLLDRVDVVFIDTYFLFPESLEFLRELEAHYGFKAKVYHAADCATQEEFYEKYGEDYWMEDIDQYDLKCKVEPLQRALREAETDAWINGRRRDHGFERAALPVWEGNKVNPLAFWTFEDCWTYLRKHKVPYHPLHDVGFSSLGDMQSTRKV-PLDKWFTYGGERSGRFEGLKNKDGSNKTECGIHTEIK 309
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A835YS08_9STRA (Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS08_9STRA) HSP 1 Score: 453 bits (1166), Expect = 1.440e-150 Identity = 221/310 (71.29%), Postives = 253/310 (81.61%), Query Frame = 3
Query: 66 STVFLSIVVGVNGFVPLVPSFSGRVVAPSSSTATQHPLSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK*K 995
+ L+++ G + FV + + R + S+ LSMGL+P LA FPRDF+ IP GTDYG G DA LNK E +RI +LE L E+LK V++VK+ PVFTTALIAGDCVILDAIAKAGLLDKI V+FIDTFFLFPES++F+ E+E HYGFKAK YH D ATQ+EFY+KYGEDYWMEDID YD KCKVEPL RAL+E +T+AWINGRRRDHG ERAALP+WEG K NPLAFWSFEDCWTYLR HNVPYHPLHDVGFSSLGDMQSTRKV PLEKWF+YGGERSGRFEG+KNKDGS KTECGIH++ K
Sbjct: 5 TAALLALLGGASAFVSVPHTAITRYESRSA-------LSMGLSPTLAKTFPRDFTKIPTGTDYGTGVDAQLNKEDEASRIAYLEQSLAETLKKVSQVKERPVFTTALIAGDCVILDAIAKAGLLDKIDVIFIDTFFLFPESLEFIEELEQHYGFKAKRYHAADVATQEEFYEKYGEDYWMEDIDQYDLKCKVEPLQRALRETNTDAWINGRRRDHGAERAALPVWEGTKVNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKV-PLEKWFTYGGERSGRFEGLKNKDGSLKTECGIHTEIK 306
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A4D9D472_9STRA (PAPS_reduct domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D472_9STRA) HSP 1 Score: 442 bits (1138), Expect = 2.270e-146 Identity = 202/271 (74.54%), Postives = 228/271 (84.13%), Query Frame = 3
Query: 177 LSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 989
+SMGLN EL +PRDF NIP GT YG+G+D+ LNK E+ ++FLE QL LK E+KK P+FTTALIAGDCV+LD IAKAGLLDKI +VFIDTFFLFPE++DFL E+E+HYGFKAKVYHC DC TQ+ FYDKYG DYWMEDID YD KCKVEPL RALKE T+AWINGRRRDHG ERA+LP+WEG K NP+AFW+FEDCW YLR HNVPYHPLHDVGFSSLGDMQST KV PLEKW +Y GERSGRF+G+ NKDGS KTECGIH+K
Sbjct: 38 VSMGLNAELTKTYPRDFKNIPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKV-PLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A7S3XUP3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUP3_HETAK) HSP 1 Score: 420 bits (1080), Expect = 1.840e-137 Identity = 196/281 (69.75%), Postives = 232/281 (82.56%), Query Frame = 3
Query: 153 SSTATQHPLSMGLNPELAANFPRDFSNIPKGTDYGEGKDAALNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK*K 995
S +A PL M L+ L +PRDF+ IP GTDYGEG+D LNK E T++DFL QL E+LK E+KK P+FTTA IAGDCV+LDAI KAGL+DK+ ++FIDT+ LFPESI FL EIE+HYGFKAKVYH EDC TQ+ +Y+KYGEDYWMEDID YD KCKVEPL RAL+E D++ WINGRRRDHG ERAALP+WEG K NPLAFW+FEDCW+YLR ++VPYHPLHDVGFSS+GD+QSTRKV + WF+YGGERSGRFEG+KNKDGS KTECG+H++ K
Sbjct: 42 SRSAPAGPL-MALDATLCEKYPRDFATIPFGTDYGEGQDEVLNKEIENTKLDFLTAQLTETLKKAVEMKKRPIFTTAEIAGDCVLLDAIHKAGLIDKVEIIFIDTYHLFPESIAFLKEIEEHYGFKAKVYHAEDCETQEIYYEKYGEDYWMEDIDAYDMKCKVEPLQRALREHDSDCWINGRRRDHGAERAALPVWEGTKLNPLAFWTFEDCWSYLRKYDVPYHPLHDVGFSSMGDVQSTRKV-DHKVWFTYGGERSGRFEGLKNKDGSAKTECGLHTEIK 320
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A6U2BYW2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2BYW2_HEMAN) HSP 1 Score: 321 bits (823), Expect = 2.540e-99 Identity = 168/324 (51.85%), Postives = 223/324 (68.83%), Query Frame = 3
Query: 54 TMKTSTVFLSIVV---GVNGFVPLVPSFSGRVVAPSSSTATQHPLSMGLNPELAANFPRDFS--------NIPKGTDYGEGKDAA--LNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHS 986
TM+T+ + +S+ + F+P +PS +V+ S + L+P +A FPR S ++ T + K+A LNK E++R+ +LE QL+ LK AE +NPVFTTALIAGD VIL I KAGL DKI+VVFIDT+ LFPE+++FL +E HYGFKA Y +DCA+ +EF +KYG+D ++ED+++YD+ KVEPL+R LKE T+ W+NGRRRDHGFERAAL +WE +K NPLA+W+FEDCW Y+R VPYHPLHD G+ SLGDM ST +V +KWF YG ER+GRF+ M+N DGS KTECGIH+
Sbjct: 3 TMRTAILLISLAFLLQSAHAFLPCLPSPIPPLVSRSQT----------LSPS-SAPFPRYTSPRFRPLSLSLSMST---KAKEATKELNKENEKSRLAYLEEQLLSDLKNAAERFENPVFTTALIAGDDVILHGINKAGLFDKIKVVFIDTYHLFPETLEFLETVEKHYGFKALRYAPKDCASPEEFEEKYGDDLFLEDVEEYDRLAKVEPLLRGLKENKTKLWVNGRRRDHGFERAALEVWEDEKMNPLAYWTFEDCWKYIRAEGVPYHPLHDDGYPSLGDMHSTLRV-DKDKWFQYGMERAGRFQNMQNADGSPKTECGIHT 311
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A7S0Z0Y0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Y0_9CRYP) HSP 1 Score: 314 bits (804), Expect = 4.420e-97 Identity = 145/237 (61.18%), Postives = 185/237 (78.06%), Query Frame = 3
Query: 276 LNKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHS 986
LN E R+ +LE QL+ LK+ AE +NPVFTTALIAGD VIL AI KAGLLD+I+V+FIDT+ LFPE+++F+ ++E HYGFKA Y + CA+ +EF +KYG+D ++ED+++YD+ KVEPL+R LKE T+ WINGRRRDHGFERAAL +WE +K NPLAFW+FEDCW Y+ VPYHPLHD G+ S+GDM ST +V +KWF YG ER+GRF+ M+N DGS KTECGIH+
Sbjct: 36 LNSEHERNRLAYLEKQLLSDLKSAAEQFENPVFTTALIAGDDVILHAIHKAGLLDRIKVLFIDTYHLFPETLEFMDKVEGHYGFKALRYGPKGCASPEEFEEKYGDDLFLEDVEEYDRLAKVEPLLRGLKENKTKLWINGRRRDHGFERAALEVWEDEKMNPLAFWTFEDCWNYIHAQGVPYHPLHDDGYPSVGDMHSTLRV-DKDKWFQYGMERAGRFQNMQNADGSAKTECGIHT 271
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: L1J678_GUITC (PAPS_reduct domain-containing protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J678_GUITC) HSP 1 Score: 304 bits (779), Expect = 3.900e-93 Identity = 141/236 (59.75%), Postives = 181/236 (76.69%), Query Frame = 3
Query: 279 NKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDKIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHS 986
NK+ E+R+ +LE Q ++ L +NPVFTTALIAGD VIL + K+GLL K+++VFIDT LFPE+++FL ++E YGFKA +Y E C T++EF +KYG+D ++EDI+ YDK KVEPL+RAL+E T+ WINGRRRD GFERAAL +WE +K NP+AFW+FEDCW Y+ H VPYHPLHD G+ SLGDM ST +V EKWF YG ER+GRF+ M+N DGS+KTECGIH+
Sbjct: 67 NKLHLESRLKYLEQQAIDDLILAVAKYENPVFTTALIAGDDVILHILHKSGLLPKVKIVFIDTLHLFPETLEFLEKVEKFYGFKAVIYKAEGCETREEFDEKYGDDIFIEDIETYDKVAKVEPLLRALRESKTKLWINGRRRDQGFERAALEVWEKEKMNPIAFWTFEDCWKYIEQHKVPYHPLHDDGYPSLGDMHSTLRVEK-EKWFLYGMERAGRFQNMQNPDGSDKTECGIHT 301
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: D8QN92_SELML (PAPS_reduct domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QN92_SELML) HSP 1 Score: 266 bits (680), Expect = 1.320e-78 Identity = 131/237 (55.27%), Postives = 165/237 (69.62%), Query Frame = 3
Query: 294 ETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLDK--IRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEGQKF---NPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 989
E R+ LE Q L+ E + P F ALIAGD V+LD + K G +K ++V+FIDTF LFPE+ FL +ED YGFKA+V+H D T++E+ K+G D ++ DID+YDK CKVEP RAL +A INGRRRDHG ERA L + + K PLA+W F DCW+YL+ ++VPYHPLHD G+ S+GD+QST V P EKWF YGGERSGRF+G+ NKDGS KTECGIHS+
Sbjct: 75 EARLQHLESQAKSVLQKTIECFERPAFPCALIAGDVVMLDLLHKIGAFEKEAVKVIFIDTFHLFPETYTFLKSLEDKYGFKARVFHAADFNTKEEYLAKHGSDLYIRDIDEYDKICKVEPFNRALSSLQVDAMINGRRRDHGAERAHLEVAQAGKMVNVQPLAYWEFRDCWSYLKKNSVPYHPLHDKGYPSIGDVQSTLPV-PKEKWFEYGGERSGRFQGLSNKDGSLKTECGIHSQ 310
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Match: A0A2R6X602_MARPO (PAPS_reduct domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X602_MARPO) HSP 1 Score: 262 bits (670), Expect = 6.110e-77 Identity = 124/241 (51.45%), Postives = 165/241 (68.46%), Query Frame = 3
Query: 279 NKVFEETRIDFLEHQLMESLKAVAEVKKNPVFTTALIAGDCVILDAIAKAGLLD--KIRVVFIDTFFLFPESIDFLHEIEDHYGFKAKVYHCEDCATQQEFYDKYGEDYWMEDIDDYDKKCKVEPLMRALKEGDTEAWINGRRRDHGFERAALPLWEG---QKFNPLAFWSFEDCWTYLRTHNVPYHPLHDVGFSSLGDMQSTRKVVPLEKWFSYGGERSGRFEGMKNKDGSEKTECGIHS 986
NK + R+ LE Q + +L+ E + P F ALI GD VILD +++ G D K++++FIDT LFPE++ FL +E YG KA ++ A +QE+ +KYG D ++ D+D+YD+ CKVEP RALK + +A +NGRRRDHG ERA L ++EG K PLA+W F DCW Y+ + +PYHPLHD G+ S+GDMQST V P +WF YGGERSGRF+G+KNKDGS KTECGIH+
Sbjct: 84 NKQVRDERLSILETQALNALRKTIENYQRPAFPCALITGDVVILDLLSRVGAFDDEKVKIIFIDTLHLFPETLTFLAAVEKRYGCKAHIFQAAGMANKQEYDEKYGSDLFIRDVDEYDRICKVEPFSRALKTLEVDAMVNGRRRDHGAERAHLEIFEGGDMAKVQPLAYWEFRDCWDYIEKYQLPYHPLHDQGYPSIGDMQSTLPV-PKSQWFEYGGERSGRFQGIKNKDGSTKTECGIHA 323 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1494.3401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1494.3401.1 >prot_F-serratus_M_contig1494.3401.1 ID=prot_F-serratus_M_contig1494.3401.1|Name=mRNA_F-serratus_M_contig1494.3401.1|organism=Fucus serratus male|type=polypeptide|length=312bp MKTSTVFLSIVVGVNGFVPLVPSFSGRVVAPSSSTATQHPLSMGLNPELAback to top mRNA from alignment at F-serratus_M_contig1494:76866..90544- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1494.3401.1 ID=mRNA_F-serratus_M_contig1494.3401.1|Name=mRNA_F-serratus_M_contig1494.3401.1|organism=Fucus serratus male|type=mRNA|length=13679bp|location=Sequence derived from alignment at F-serratus_M_contig1494:76866..90544- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1494:76866..90544- >mRNA_F-serratus_M_contig1494.3401.1 ID=mRNA_F-serratus_M_contig1494.3401.1|Name=mRNA_F-serratus_M_contig1494.3401.1|organism=Fucus serratus male|type=CDS|length=1872bp|location=Sequence derived from alignment at F-serratus_M_contig1494:76866..90544- (Fucus serratus male)back to top |