mRNA_F-serratus_M_contig1470.3277.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: A0A836CN33_9STRA (Nitric-oxide synthase (NADPH) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN33_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.100e-27 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALR---QGTVLAPCVVFFGCRDNSEFLCSGDMEKWCKIGVITALHVAFSR-GAGPKTYVQHLIAKHRKGVWEIVRDNSC 324
FR P D+S +PV+M+G GTGISPM+GFLQARE A + G+ + PC V+FGCR +FL M KW G+IT L VAFSR K YVQ+LIA+ R+ +W ++++ C
Sbjct: 1464 FRLPQDMSGAPVIMVGPGTGISPMLGFLQAREVAAKGAANGSSIGPCTVYFGCRGPPDFLHQEQMRKWESTGIITDLQVAFSRIDPNKKVYVQNLIAEQREKLWTLLQNPKC 1575
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: D8LQZ9_ECTSI (Nitric oxide synthase, oxygenase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ9_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.500e-26 Identity = 48/100 (48.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 25 TSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCRDNSEFLCSGDMEKWCKIGVITALHVAFSRGAGPKTYVQHLIAKHRKGVWEIVRDNSC 324
T P ++G+G+GISP++GFL+AR +A RQG VLAPC+ +FGCRD+SE L + ++ W + G +T LHVA SR VQ LI++ + VWE++R+ +C
Sbjct: 74 TMPGELVGSGSGISPLMGFLEARAKASRQGKVLAPCLFYFGCRDSSEILYANRLQTWLEDGELTELHVAKSREGPNVMNVQDLISRQQASVWELLRNPTC 173
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: A0A836CN69_9STRA (Nitric-oxide synthase (NADPH) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN69_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.030e-24 Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALR---QGTVLAPCVVFFGCRDNSEFLCSGDMEKWCKIGVITALH----------------VAFSR-GAGPKTYVQHLIAKHRKGVWEIVRDNSC 324
FR P D+S +PV+M+G GTGISPM+GFLQARE A + G+ + PC V+FGCR +FL M KW G+IT L VAFSR K YVQ+LIA+ R+ +W +++D C
Sbjct: 1374 FRLPQDMSGAPVIMVGPGTGISPMLGFLQAREVAAKGAANGSSIGPCTVYFGCRGPPDFLHQEQMRKWESTGIITDLQNAHHCCFRCSLDACEQVAFSRIDPNKKVYVQNLIAEQREKLWTLLQDPKC 1501
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: A0A533J4X8_9BRAD (NADPH--cytochrome reductase (Fragment) n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533J4X8_9BRAD) HSP 1 Score: 100 bits (248), Expect = 6.610e-24 Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCRDNSE-FLCSGDMEKWCKIGVITALHVAFSRGAGPKTYVQHLIAKHRKGVWEIVRDNS 321
FR PDD S P++MIG GTG++P GFLQ R +G L P ++FFGCR+ ++ FL + +++ + GV + LH AFSRG GPKTYVQ+L+A+ + VW ++ +
Sbjct: 63 FRLPDDASV-PIIMIGPGTGLAPFRGFLQERAARKARGATLGPAMLFFGCRNPAQDFLYADELKGFAADGV-SELHTAFSRGDGPKTYVQNLLAQQKDKVWSLIEKGA 168
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: UPI0020266AEB (LOW QUALITY PROTEIN: NADPH--cytochrome P450 reductase n=2 Tax=Gekkota TaxID=8560 RepID=UPI0020266AEB) HSP 1 Score: 104 bits (259), Expect = 8.450e-24 Identity = 48/109 (44.04%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCR-DNSEFLCSGDMEKWCKIGVITALHVAFSRGAGPKTYVQHLIAKHRKGVWEIVRDNSC 324
FR P ST+PV+MIG GTGI+P +GF+Q R +QG + V+++GCR +N ++L ++ K+ K G +T LHVAFSR K YVQHL+ K+++ VW+++ + +C
Sbjct: 495 FRLPFK-STTPVIMIGPGTGIAPFVGFIQERGWLKQQGKEVGETVLYYGCRHENEDYLYKDELAKFLKEGALTGLHVAFSRDQEHKIYVQHLLKKNKENVWKLIHEGNC 602
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: UPI001BAD33AF (cytochrome P450 n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BAD33AF) HSP 1 Score: 104 bits (259), Expect = 8.890e-24 Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCRD-NSEFLCSGDMEKWCKIGVITALHVAFSRGAGPKTYVQHLIAKHRKGVWEIV 309
FR PDD + P++MIG GTG++P GFLQ R QG L P ++FFGCR + +FL +++++ GV LHVAFSRG GPKTYVQHLIA+ + VW ++
Sbjct: 919 FRLPDDAAV-PIIMIGPGTGLAPFRGFLQERAARKAQGQELGPAMLFFGCRHPDQDFLYGKELQQFATDGV-AELHVAFSRGEGPKTYVQHLIAQQQDKVWNLI 1020
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: A0A812GYX6_9DINO (CypB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812GYX6_9DINO) HSP 1 Score: 104 bits (259), Expect = 8.970e-24 Identity = 48/109 (44.04%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCRDNSE-FLCSGDMEKWCKIGVITALHVAFSRGAGPKTYVQHLIAKHRKGVWEIVRDNSC 324
F P+D S +P++M+G GTG++PM+GFLQ RE L++GT + +FFGCR E +L ++E K G ++ LHVAFSR +G K YVQ I++ R+ +W++++D C
Sbjct: 1158 FHLPEDRS-APIIMVGPGTGLAPMMGFLQQREALLKKGTKVGHATLFFGCRARDEDYLYQEELEGHLKSGALSQLHVAFSRESGQKVYVQDKISEQREALWKLLQDPKC 1265
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: A0A812JPJ3_9DINO (CypB protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812JPJ3_9DINO) HSP 1 Score: 103 bits (258), Expect = 1.240e-23 Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCRDNSE-FLCSGDME-KWCKIGVITALHVAFSRGAGPKTYVQHLIAKHRKGVWEIVRDNSC 324
F P+D T+P++M+G GTG++PM+GFLQ RE L++GT + +FFGCR E +L D+E ++ K G ++ LHVAFSR +G K YVQ I + R VW +++D C
Sbjct: 1271 FHLPED-RTAPIIMVGPGTGLAPMMGFLQQREALLKKGTKVGHATLFFGCRARDEDYLYQEDLEGRYLKSGALSTLHVAFSRESGQKVYVQDKIWEERDAVWRLLQDPKC 1379
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: K9QGA7_9NOSO (Ferredoxin--NADP reductase n=5 Tax=Nostocales TaxID=1161 RepID=K9QGA7_9NOSO) HSP 1 Score: 103 bits (256), Expect = 2.290e-23 Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCRDNSEFLCSGDMEKWCKIGVITALHVAFSRGAGPKTYVQHLIAKHRKGVWEIVRDNSC 324
FR P D + ++M+G GTG+SP+IGFLQ R+ +QG LA +FFGCR++ +FL ++ W GV++ L+VAFSR G K YVQHL+ + + +W+++ C
Sbjct: 1274 FRPPSD-PEAMMLMVGPGTGVSPLIGFLQYRQALWQQGQPLADAALFFGCRNHQDFLYQEQLQTWYNQGVLSELNVAFSRQGGEKVYVQHLMQRKPQEIWQLLSHPKC 1380
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Match: A0A7S4QI30_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QI30_9DINO) HSP 1 Score: 102 bits (255), Expect = 3.100e-23 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 1 FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCRDNSE-FLCSGDMEKWCKIGVITALHVAFSRGAGPKTYVQHLIAKHRKGVWEIVRDNS 321
F PDD +PV+M+G GTG++PM+GFLQ RE LR G L P ++FFGCR E +L ++++ K G ++ LHVA SR K YVQ LI +HR VW++++ S
Sbjct: 1018 FHMPDD-PAAPVIMVGPGTGVAPMMGFLQEREHLLRSGQALGPAMLFFGCRRRDEDYLYEEELDQALKSGALSDLHVACSREGPQKVYVQDLIWEHRAAVWKLLQQPS 1124 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1470.3277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1470.3277.1 >prot_F-serratus_M_contig1470.3277.1 ID=prot_F-serratus_M_contig1470.3277.1|Name=mRNA_F-serratus_M_contig1470.3277.1|organism=Fucus serratus male|type=polypeptide|length=108bp FRAPDDLSTSPVMMIGAGTGISPMIGFLQAREEALRQGTVLAPCVVFFGCback to top mRNA from alignment at F-serratus_M_contig1470:124755..125818- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1470.3277.1 ID=mRNA_F-serratus_M_contig1470.3277.1|Name=mRNA_F-serratus_M_contig1470.3277.1|organism=Fucus serratus male|type=mRNA|length=1064bp|location=Sequence derived from alignment at F-serratus_M_contig1470:124755..125818- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1470:124755..125818- >mRNA_F-serratus_M_contig1470.3277.1 ID=mRNA_F-serratus_M_contig1470.3277.1|Name=mRNA_F-serratus_M_contig1470.3277.1|organism=Fucus serratus male|type=CDS|length=648bp|location=Sequence derived from alignment at F-serratus_M_contig1470:124755..125818- (Fucus serratus male)back to top |