mRNA_F-serratus_M_contig1420.3033.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 211 bits (537), Expect = 1.700e-58 Identity = 98/268 (36.57%), Postives = 164/268 (61.19%), Query Frame = 1
Query: 13 PDEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRK 816
PD P TL +A+ S EW W+ A++ E + G W++ + + + ++G++ VF +K + G+V +YK R VA+GF QI G+ Y ++ SP +VR + + A+ DWE RQ+D++ A+L ++ EE+++E P+G++D +V RL+ + GL AG +W+KK + +L GF R+ ADPCV++ GK+ I+ V+VDD+++ +++ + L+ F +KDLGE LG I R+RK +T+T Q+ Y T+ ERF K
Sbjct: 852 PDVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSK 1118
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 204 bits (520), Expect = 3.250e-56 Identity = 102/266 (38.35%), Postives = 161/266 (60.53%), Query Frame = 1
Query: 16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVF-WRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
DEP +L EA+ S EWP+W A+K E D G W++ D PK + +G K VF+RK ++G+V KYK R VA+G+ QI G+ + E+ +P S+R L + + +WE Q+DV+ A+L D+ EE+Y+ P+G+ D ++ RL+K + GL +G W++K EL G++R +ADPCV+ W + G+V II V+VDDLL+ + + + DL+ F + DLGE +G I RDR+A + QQ Y +++ +R+ +
Sbjct: 905 DEPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQ-IITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQL 1169
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 201 bits (511), Expect = 5.190e-55 Identity = 103/263 (39.16%), Postives = 159/263 (60.46%), Query Frame = 1
Query: 22 PTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
P ++ EA+ S EW +W+ A+ EM G + D P G+ +G K VF +K +DG + +YK R VA+G+ QI G+ Y E+ +P SVR AL + A+ D E Q+DV+ A+L ++ EE+Y+ P+GY D +V RL+K + GL +G W+++FD +L + GF + +AD CV+ R G++ II V+VDDLL+ SET +D +L + F +KDLGE +G I RDR+ T++ Q++Y + V RFG+
Sbjct: 879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGM 1140
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 197 bits (502), Expect = 8.510e-54 Identity = 105/265 (39.62%), Postives = 154/265 (58.11%), Query Frame = 1
Query: 16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
DEP T EA + +W+ A E+ + ++ V+RP+ + V+ K VFK K G DG + KYK R VAKGF Q++G+ + E+ +P +SVR L + A LD E Q+DV+ AFL D+ EE+Y+++P G+H S + V +L KA+ GL AG W KK E A GF R +D VF++ G +++II +YVDD+L+LS+ EDL+S F + DLGE + LG ITRDR R + Q +Y + + G+
Sbjct: 924 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGM 1187
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A182GR37_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR37_AEDAL) HSP 1 Score: 186 bits (471), Expect = 5.840e-53 Identity = 92/270 (34.07%), Postives = 156/270 (57.78%), Query Frame = 1
Query: 4 SNLPDEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIR 813
S + D PTT+ E + +WP W+ A++ EMD ++ W +V P+G+ + K +FK K +D +YK R VA+GF Q +G Y ++ SP ++R L + W Q+DV+ AFL ++TEE+Y+ P+G+ V RL++++ GL A W+++F +V GF RS+ D C++ R+ G VI+V+YVDD+L+ S +++ + L + F + D+GE+ +LG I RD + +T+ Q+RY + + +RF +R
Sbjct: 89 SYVEDLPTTVSECRQREDWPLWKQAMQEEMDSLVSNEKWTLVKLPEGRNAVTCKWIFKLKHSEDNEAPRYKARLVARGFTQKQGFDYSDTYSPLARMDTLRTVLALANQRGWSVHQMDVKCAFLNGELTEEIYMLQPEGFEQRDGLVCRLKRSLYGLKQAARSWNERFHNFVVRLGFVRSRNDLCLY-RRGSGDTQVILVIYVDDVLIASGSEKLVGTIKKCLSTEFEMTDVGEVRNFLGMRIDRDAEKKTLRISQRRYLENLLDRFQMR 357
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 193 bits (491), Expect = 2.450e-52 Identity = 101/266 (37.97%), Postives = 154/266 (57.89%), Query Frame = 1
Query: 13 PDEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
PD+PTT+ E K S+ W+ A+ E + G W++VD P GK L +K VF+ K G++ K+K R V KG Q KG+ ++E+ SP SS+R L + A D + Q+D AFL+ D+TEE+Y+ P+GY +S +V RL+K++ GL A +W+ K D L G +S+ DPC++++ K+V + V+VDDLL+ S+ K+ L F + D+GE F LG I+RDR+ + + DQ+ Y V RFG+
Sbjct: 837 PDDPTTVEEIKTRSDRDLWKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSSQKKMV-FVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGM 1100
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY) HSP 1 Score: 192 bits (488), Expect = 5.120e-52 Identity = 97/259 (37.45%), Postives = 156/259 (60.23%), Query Frame = 1
Query: 31 LHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVF-WRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERF 804
L +A+ S EW +W A+K E D G W++ D PK + +G K VF+RK ++ +V KYK R VA+G+ QI G+ + E+ +P S+R L + + +WE Q+DV+ A+L D+ EE+Y+ P+G+ D ++ RL+K + GL +G W++K EL+ G++R +ADPCV+ W + G+V II V+VDDLL+ + + + DL+ F + DLGE +G I RDR+A T+ QQ Y +++ +R+
Sbjct: 715 LTKAQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQ-IITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGTLQISQQHYIESILKRY 972
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 192 bits (488), Expect = 5.670e-52 Identity = 102/265 (38.49%), Postives = 152/265 (57.36%), Query Frame = 1
Query: 16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
DEP T EA + +W+ A E+ + ++ V+RP+ + V+ K VFK K G DG + KYK R VAKGF Q++G+ + E+ +P +SVR L + A LD E Q+DV+ AFL D+ EE+Y+++P G+ S + + +L KA+ GL AG W KK E A GF R +D VF++ G +++II +YVDD+L+LS+ EDL+S F + DLGE + LG I RDR R + Q +Y + + G+
Sbjct: 601 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGM 864
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: O23864_9ORYZ (Polyprotein n=1 Tax=Oryza australiensis TaxID=4532 RepID=O23864_9ORYZ) HSP 1 Score: 191 bits (486), Expect = 1.140e-51 Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 1
Query: 16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHD--SPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
DEP T EA + + +W GA+K E++ VW +VD P G + K +FK+K DG V YK R VAKGF+QI+G+ Y E+ SP S+R+ L + A D+E Q+DV+ AFL +++E++Y+ P G+ D SP ++ +LQK++ GL A W+ +FD + GF +++ + CV+ +K G +V +++YVDD+L++ L++SF +KDLGE ++ LG I RDR R + Q Y V +RF +
Sbjct: 793 DEPKTYEEAMVGHDSNKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVY-KKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNM 1058
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A8J5YBS1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YBS1_9ROSI) HSP 1 Score: 190 bits (483), Expect = 1.320e-51 Identity = 104/271 (38.38%), Postives = 157/271 (57.93%), Query Frame = 1
Query: 16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGR---LQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKT 819
DEP T EA S E +W AL+ EMD VW +VD PKG +G K VFK+K+ DG V YK R VAKGFRQI G++Y E+ SP S+R++L + A D+E Q+DV+ AFL + E++Y+ P+G+ + P G+ LQ+++ GL A W+ +F+ + GF +++ +PCV+ +K G + +V+YVDD+L++ L S F +KDLGE+++ LG I RDR R + +Q Y V +RF + ++
Sbjct: 444 DEPRTYQEAVASPESEKWLEALRSEMDSMYENQVWTLVDPPKGVKPIGCKWVFKKKIDMDGNVQTYKGRLVAKGFRQIHGVNYDETFSPVAMFKSIRISLAIAAFHDYEIWQMDVKTAFLNGKLEEDVYMTQPEGFVN-PKDAGKICKLQRSIYGLKQASQSWNLRFNDAIKEFGFIKNEDEPCVY-KKVSGNTITFLVLYVDDILIMGNDIPTLQSIKTWLGSCFSMKDLGEVTYILGVKIYRDRSRRLLGLNQGTYIDKVLKRFNMEES 712 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1420.3033.1 >prot_F-serratus_M_contig1420.3033.1 ID=prot_F-serratus_M_contig1420.3033.1|Name=mRNA_F-serratus_M_contig1420.3033.1|organism=Fucus serratus male|type=polypeptide|length=173bp MALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQback to top mRNA from alignment at F-serratus_M_contig1420:45683..46507+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1420.3033.1 ID=mRNA_F-serratus_M_contig1420.3033.1|Name=mRNA_F-serratus_M_contig1420.3033.1|organism=Fucus serratus male|type=mRNA|length=825bp|location=Sequence derived from alignment at F-serratus_M_contig1420:45683..46507+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1420:45683..46507+ >mRNA_F-serratus_M_contig1420.3033.1 ID=mRNA_F-serratus_M_contig1420.3033.1|Name=mRNA_F-serratus_M_contig1420.3033.1|organism=Fucus serratus male|type=CDS|length=1038bp|location=Sequence derived from alignment at F-serratus_M_contig1420:45683..46507+ (Fucus serratus male)back to top |