prot_F-serratus_M_contig1420.3033.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1420.3033.1
Unique Nameprot_F-serratus_M_contig1420.3033.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length173
Homology
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 138 bits (347), Expect = 1.450e-34
Identity = 63/164 (38.41%), Postives = 103/164 (62.80%), Query Frame = 0
Query:    7 ALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRK 170
            A+ DWE RQ+D++ A+L  ++ EE+++E P+G++D   +V RL+  + GL  AG +W+KK + +L   GF R+ ADPCV++    GK+  I+ V+VDD+++  +++      +  L+  F +KDLGE    LG  I R+RK +T+T  Q+ Y  T+ ERF   K
Sbjct:  956 AIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSK 1118          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A2P6SP23_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SP23_ROSCH)

HSP 1 Score: 135 bits (339), Expect = 1.720e-33
Identity = 68/166 (40.96%), Postives = 104/166 (62.65%), Query Frame = 0
Query:    7 ALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQ--VGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRK 170
            A +D E  QLDV+ AFL  D+ EE+Y+E P+G+     Q  V +L+K++ GL  A   W KKFD  +V  G++R+ ADPCV+ ++  G   +I+++YVDD+L++ +     H+   DL  SF +KDLG     LG  ITRDR+A+ +   Q+RY + V ERF +++
Sbjct:  922 ASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKE 1087          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A2P6Q6P3_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6P3_ROSCH)

HSP 1 Score: 132 bits (331), Expect = 4.680e-33
Identity = 67/166 (40.36%), Postives = 103/166 (62.05%), Query Frame = 0
Query:    7 ALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQ--VGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRK 170
            A +D E  QLDV+ AFL  D+ EE+Y+E P+G+     Q  V +L+K++ GL  A   W KKFD  +V  G++R+ ADPCV+ ++  G   +I+++YVDD+L++ +      +   DL  SF +KDLG     LG  ITRDR+A+ +   Q+RY + V ERF +++
Sbjct:   83 ASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKE 248          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 127 bits (320), Expect = 1.360e-31
Identity = 67/167 (40.12%), Postives = 104/167 (62.28%), Query Frame = 0
Query:    2 ALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 168
            AL + A+ D E  Q+DV+ A+L  ++ EE+Y+  P+GY D   +V RL+K + GL  +G  W+ +FD +L + GF + +AD CV+ R   G++  II V+VDDLL+ SET +D      +L + F +KDLGE    +G  I RDR+  T++  Q++Y + V  RFG+
Sbjct:   68 ALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGM 233          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 129 bits (324), Expect = 1.790e-31
Identity = 67/167 (40.12%), Postives = 105/167 (62.87%), Query Frame = 0
Query:    2 ALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 168
            AL + A+ D E  Q+DV+ A+L  ++ EE+Y+  P+GY D   +V RL+K + GL  +G  W+++FD +L + GF + +AD CV+ R   G++  II V+VDDLL+ SET +D      +L + F +KDLGE    +G  I RDR+  T++  Q++Y + V  RFG+
Sbjct:  975 ALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGM 1140          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 126 bits (316), Expect = 5.910e-31
Identity = 64/163 (39.26%), Postives = 99/163 (60.74%), Query Frame = 0
Query:   10 DWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGR--LQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRK 170
            D E   +DV+ AFL  DV EELY++ PDG+ D  N   +  L++A+ G   A   W+ K +  L  +GF RS ADPCV+ R+   +   I+V+YVDDL++ S+TK+        L+  F IK+LGE+ + LG  I R+R+ +T+  +Q+ Y + + E+FG+ K
Sbjct:   86 DMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYS-IVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDK 247          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A0A9YJR4_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YJR4_LYGHE)

HSP 1 Score: 124 bits (312), Expect = 7.570e-31
Identity = 61/164 (37.20%), Postives = 106/164 (64.63%), Query Frame = 0
Query:    9 LDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSP--NQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRK 170
            LD     +DVE AFL  ++TEE+ ++ P+G+ DS   N+V  L+K++ GL  A  +W+KK +  L+  GF++S+ + C+F++ + GK ++I+ VYVDD L+LS    D+++ ++DL   F IKDLG +  ++G  I RDRK  T   +Q+ +   + ++FG+++
Sbjct:   53 LDLNIDHIDVETAFLNGELTEEVIMDQPEGFKDSKRSNKVCLLKKSIYGLKQASRVWNKKVESILLNLGFQKSKYEACLFFKNN-GKSILIVAVYVDDFLILSSNVDDKNKLVKDLSKIFKIKDLGPVKNFVGLEIERDRKNHTTKVNQKNFILKLLDKFGVKE 215          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 126 bits (316), Expect = 2.160e-30
Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = 0
Query:    3 LVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 168
            L + A LD E  Q+DV+ AFL  D+ EE+Y+++P G+H S + V +L KA+ GL  AG  W KK   E  A GF R  +D  VF++   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG  ITRDR  R +   Q +Y +    + G+
Sbjct: 1023 LALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGM 1187          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A8J6D8V3_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8V3_9ROSI)

HSP 1 Score: 123 bits (309), Expect = 1.910e-29
Identity = 62/166 (37.35%), Postives = 101/166 (60.84%), Query Frame = 0
Query:    7 ALLDWEGRQLDVEMAFLEADVTEELYVELPDGY--HDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRK 170
            A  D E  Q+DV+ AFL  D+ EELY+E P+G+      + V RL+K++ GL  A   W KKF+  +  +G++++ +D CVF ++  G   +I+++YVDD+L++ +      +  ++L  SF +KDLG     LG  +TRDRKA+ +   Q+RY + V +RF + K
Sbjct: 1660 ACYDLEVEQMDVKTAFLHGDLEEELYMEQPEGFVLQGKEDYVCRLKKSLYGLKQAPRQWYKKFESVMGEQGYKKTTSDHCVFVKRFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQRFSMDK 1825          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A2R6NJS8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NJS8_9APHY)

HSP 1 Score: 123 bits (308), Expect = 2.470e-29
Identity = 62/165 (37.58%), Postives = 101/165 (61.21%), Query Frame = 0
Query:   10 DWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVG---RLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKT 171
            DWE  Q+DV  A+L+ D+ EE+Y+++P+G  + P + G   RL+KA+ GL  +G  W KK D  +   GFE+ QAD C++  K  G +V++++VYVDD+ V  +      R   DL   F I D G+++F LG  + R+R+ RT+  +Q  Y +   +RFG++++
Sbjct:  668 DWELHQMDVVGAYLQGDLDEEIYMKVPEGIKE-PGKEGWCWRLKKALYGLKQSGRQWKKKLDEAMAELGFEKGQADECLYVLKEDGHIVLMVLVYVDDMAVAGKKLALVKRFKHDLAERFDITDGGDLTFILGVQVIRNRQNRTIHMNQTTYIRGFLDRFGMKES 831          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3AKI0_9AGAM1.450e-3438.41Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A2P6SP23_ROSCH1.720e-3340.96Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A2P6Q6P3_ROSCH4.680e-3340.36Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A284R853_ARMOS1.360e-3140.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS1.790e-3140.12Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
H3G9E3_PHYRM5.910e-3139.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9YJR4_LYGHE7.570e-3137.20Retrovirus-related Pol polyprotein from transposon... [more]
A0A401G4V0_9APHY2.160e-3040.96Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J6D8V3_9ROSI1.910e-2937.35Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A2R6NJS8_9APHY2.470e-2937.58Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 6..170
e-value: 9.0E-32
score: 110.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..149
NoneNo IPR availablePANTHERPTHR11439:SF267coord: 3..149
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 16..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1420contigF-serratus_M_contig1420:45989..46507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1420.3033.1mRNA_F-serratus_M_contig1420.3033.1Fucus serratus malemRNAF-serratus_M_contig1420 45683..46507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1420.3033.1 ID=prot_F-serratus_M_contig1420.3033.1|Name=mRNA_F-serratus_M_contig1420.3033.1|organism=Fucus serratus male|type=polypeptide|length=173bp
MALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQ
KAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVV
YVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKART
VTFDQQRYAQTVTERFGIRKTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like