mRNA_F-serratus_M_contig1420.3033.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1420.3033.1
Unique NamemRNA_F-serratus_M_contig1420.3033.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 211 bits (537), Expect = 1.700e-58
Identity = 98/268 (36.57%), Postives = 164/268 (61.19%), Query Frame = 1
Query:   13 PDEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRK 816
            PD P TL +A+ S EW  W+ A++ E    +  G W++ +  + + ++G++ VF +K  + G+V +YK R VA+GF QI G+ Y ++ SP     +VR  + + A+ DWE RQ+D++ A+L  ++ EE+++E P+G++D   +V RL+  + GL  AG +W+KK + +L   GF R+ ADPCV++    GK+  I+ V+VDD+++  +++      +  L+  F +KDLGE    LG  I R+RK +T+T  Q+ Y  T+ ERF   K
Sbjct:  852 PDVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSK 1118          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 204 bits (520), Expect = 3.250e-56
Identity = 102/266 (38.35%), Postives = 161/266 (60.53%), Query Frame = 1
Query:   16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVF-WRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
            DEP +L EA+ S EWP+W  A+K E D     G W++ D PK +  +G K VF+RK  ++G+V KYK R VA+G+ QI G+ + E+ +P     S+R  L +  + +WE  Q+DV+ A+L  D+ EE+Y+  P+G+ D   ++ RL+K + GL  +G  W++K   EL   G++R +ADPCV+ W +  G+V  II V+VDDLL+ + + +       DL+  F + DLGE    +G  I RDR+A  +   QQ Y +++ +R+ +
Sbjct:  905 DEPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQ-IITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQL 1169          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 201 bits (511), Expect = 5.190e-55
Identity = 103/263 (39.16%), Postives = 159/263 (60.46%), Query Frame = 1
Query:   22 PTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
            P ++ EA+ S EW +W+ A+  EM      G +   D P G+  +G K VF +K  +DG + +YK R VA+G+ QI G+ Y E+ +P     SVR AL + A+ D E  Q+DV+ A+L  ++ EE+Y+  P+GY D   +V RL+K + GL  +G  W+++FD +L + GF + +AD CV+ R   G++  II V+VDDLL+ SET +D      +L + F +KDLGE    +G  I RDR+  T++  Q++Y + V  RFG+
Sbjct:  879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGM 1140          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 197 bits (502), Expect = 8.510e-54
Identity = 105/265 (39.62%), Postives = 154/265 (58.11%), Query Frame = 1
Query:   16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
            DEP T  EA    +  +W+ A   E+   +   ++  V+RP+ + V+  K VFK K G DG + KYK R VAKGF Q++G+ + E+ +P    +SVR  L + A LD E  Q+DV+ AFL  D+ EE+Y+++P G+H S + V +L KA+ GL  AG  W KK   E  A GF R  +D  VF++   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG  ITRDR  R +   Q +Y +    + G+
Sbjct:  924 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGM 1187          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A182GR37_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR37_AEDAL)

HSP 1 Score: 186 bits (471), Expect = 5.840e-53
Identity = 92/270 (34.07%), Postives = 156/270 (57.78%), Query Frame = 1
Query:    4 SNLPDEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIR 813
            S + D PTT+ E +   +WP W+ A++ EMD  ++   W +V  P+G+  +  K +FK K  +D    +YK R VA+GF Q +G  Y ++ SP     ++R  L +     W   Q+DV+ AFL  ++TEE+Y+  P+G+      V RL++++ GL  A   W+++F   +V  GF RS+ D C++ R+  G   VI+V+YVDD+L+ S +++      + L + F + D+GE+  +LG  I RD + +T+   Q+RY + + +RF +R
Sbjct:   89 SYVEDLPTTVSECRQREDWPLWKQAMQEEMDSLVSNEKWTLVKLPEGRNAVTCKWIFKLKHSEDNEAPRYKARLVARGFTQKQGFDYSDTYSPLARMDTLRTVLALANQRGWSVHQMDVKCAFLNGELTEEIYMLQPEGFEQRDGLVCRLKRSLYGLKQAARSWNERFHNFVVRLGFVRSRNDLCLY-RRGSGDTQVILVIYVDDVLIASGSEKLVGTIKKCLSTEFEMTDVGEVRNFLGMRIDRDAEKKTLRISQRRYLENLLDRFQMR 357          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 193 bits (491), Expect = 2.450e-52
Identity = 101/266 (37.97%), Postives = 154/266 (57.89%), Query Frame = 1
Query:   13 PDEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
            PD+PTT+ E K  S+   W+ A+  E    +  G W++VD P GK  L +K VF+ K    G++ K+K R V KG  Q KG+ ++E+ SP    SS+R  L + A  D +  Q+D   AFL+ D+TEE+Y+  P+GY +S  +V RL+K++ GL  A  +W+ K D  L   G  +S+ DPC++++    K+V  + V+VDDLL+ S+ K+        L   F + D+GE  F LG  I+RDR+ + +  DQ+ Y   V  RFG+
Sbjct:  837 PDDPTTVEEIKTRSDRDLWKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSSQKKMV-FVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGM 1100          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY)

HSP 1 Score: 192 bits (488), Expect = 5.120e-52
Identity = 97/259 (37.45%), Postives = 156/259 (60.23%), Query Frame = 1
Query:   31 LHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVF-WRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERF 804
            L +A+ S EW +W  A+K E D     G W++ D PK +  +G K VF+RK  ++ +V KYK R VA+G+ QI G+ + E+ +P     S+R  L +  + +WE  Q+DV+ A+L  D+ EE+Y+  P+G+ D   ++ RL+K + GL  +G  W++K   EL+  G++R +ADPCV+ W +  G+V  II V+VDDLL+ + + +       DL+  F + DLGE    +G  I RDR+A T+   QQ Y +++ +R+
Sbjct:  715 LTKAQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQ-IITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGTLQISQQHYIESILKRY 972          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 192 bits (488), Expect = 5.670e-52
Identity = 102/265 (38.49%), Postives = 152/265 (57.36%), Query Frame = 1
Query:   16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
            DEP T  EA    +  +W+ A   E+   +   ++  V+RP+ + V+  K VFK K G DG + KYK R VAKGF Q++G+ + E+ +P    +SVR  L + A LD E  Q+DV+ AFL  D+ EE+Y+++P G+  S + + +L KA+ GL  AG  W KK   E  A GF R  +D  VF++   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG  I RDR  R +   Q +Y +    + G+
Sbjct:  601 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGM 864          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: O23864_9ORYZ (Polyprotein n=1 Tax=Oryza australiensis TaxID=4532 RepID=O23864_9ORYZ)

HSP 1 Score: 191 bits (486), Expect = 1.140e-51
Identity = 99/267 (37.08%), Postives = 155/267 (58.05%), Query Frame = 1
Query:   16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHD--SPNQVGRLQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGI 810
            DEP T  EA +  +  +W GA+K E++      VW +VD P G   +  K +FK+K   DG V  YK R VAKGF+QI+G+ Y E+ SP     S+R+ L + A  D+E  Q+DV+ AFL  +++E++Y+  P G+ D  SP ++ +LQK++ GL  A   W+ +FD  +   GF +++ + CV+ +K  G  +V +++YVDD+L++             L++SF +KDLGE ++ LG  I RDR  R +   Q  Y   V +RF +
Sbjct:  793 DEPKTYEEAMVGHDSNKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVY-KKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNM 1058          
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Match: A0A8J5YBS1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YBS1_9ROSI)

HSP 1 Score: 190 bits (483), Expect = 1.320e-51
Identity = 104/271 (38.38%), Postives = 157/271 (57.93%), Query Frame = 1
Query:   16 DEPTTLHEAKMSSEWPQWRGALKREMDG*IARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVGKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSVRMALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGR---LQKAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKT 819
            DEP T  EA  S E  +W  AL+ EMD      VW +VD PKG   +G K VFK+K+  DG V  YK R VAKGFRQI G++Y E+ SP     S+R++L + A  D+E  Q+DV+ AFL   + E++Y+  P+G+ + P   G+   LQ+++ GL  A   W+ +F+  +   GF +++ +PCV+ +K  G  +  +V+YVDD+L++             L S F +KDLGE+++ LG  I RDR  R +  +Q  Y   V +RF + ++
Sbjct:  444 DEPRTYQEAVASPESEKWLEALRSEMDSMYENQVWTLVDPPKGVKPIGCKWVFKKKIDMDGNVQTYKGRLVAKGFRQIHGVNYDETFSPVAMFKSIRISLAIAAFHDYEIWQMDVKTAFLNGKLEEDVYMTQPEGFVN-PKDAGKICKLQRSIYGLKQASQSWNLRFNDAIKEFGFIKNEDEPCVY-KKVSGNTITFLVLYVDDILIMGNDIPTLQSIKTWLGSCFSMKDLGEVTYILGVKIYRDRSRRLLGLNQGTYIDKVLKRFNMEES 712          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1420.3033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3AKI0_9AGAM1.700e-5836.57Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A401GYH9_9APHY3.250e-5638.35Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A284QR88_ARMOS5.190e-5539.16Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A401G4V0_9APHY8.510e-5439.62Retrovirus-related Pol polyprotein from transposon... [more]
A0A182GR37_AEDAL5.840e-5334.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9Z683_LYGHE2.450e-5237.97Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H727_9APHY5.120e-5237.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A401H123_9APHY5.670e-5238.49Retrovirus-related Pol polyprotein from transposon... [more]
O23864_9ORYZ1.140e-5137.08Polyprotein n=1 Tax=Oryza australiensis TaxID=4532... [more]
A0A8J5YBS1_9ROSI1.320e-5138.38Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1420contigF-serratus_M_contig1420:45683..46507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.1
Seed ortholog evalue8e-27
Seed eggNOG ortholog164328.Phyra71619
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3QHW0@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size825
Cds size519
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929407.7874105-UTR-F-serratus_M_contig1420:45682..459881622929407.7874105-UTR-F-serratus_M_contig1420:45682..45988Fucus serratus maleUTRF-serratus_M_contig1420 45683..45988 +
1690962837.8563416-UTR-F-serratus_M_contig1420:45682..459881690962837.8563416-UTR-F-serratus_M_contig1420:45682..45988Fucus serratus maleUTRF-serratus_M_contig1420 45683..45988 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929407.8091881-CDS-F-serratus_M_contig1420:45988..465071622929407.8091881-CDS-F-serratus_M_contig1420:45988..46507Fucus serratus maleCDSF-serratus_M_contig1420 45989..46507 +
1690962837.8674955-CDS-F-serratus_M_contig1420:45988..465071690962837.8674955-CDS-F-serratus_M_contig1420:45988..46507Fucus serratus maleCDSF-serratus_M_contig1420 45989..46507 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1420.3033.1prot_F-serratus_M_contig1420.3033.1Fucus serratus malepolypeptideF-serratus_M_contig1420 45989..46507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1420.3033.1

>prot_F-serratus_M_contig1420.3033.1 ID=prot_F-serratus_M_contig1420.3033.1|Name=mRNA_F-serratus_M_contig1420.3033.1|organism=Fucus serratus male|type=polypeptide|length=173bp
MALVVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQ
KAMCGLMHAGLLWSKKFDGELVAKGFERSQADPCVFWRKHLGKVVVIIVV
YVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISFYLGCHITRDRKART
VTFDQQRYAQTVTERFGIRKTA*
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mRNA from alignment at F-serratus_M_contig1420:45683..46507+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1420.3033.1 ID=mRNA_F-serratus_M_contig1420.3033.1|Name=mRNA_F-serratus_M_contig1420.3033.1|organism=Fucus serratus male|type=mRNA|length=825bp|location=Sequence derived from alignment at F-serratus_M_contig1420:45683..46507+ (Fucus serratus male)
GCGAGCAACCTACCAGACGAGCCCACCACCCTGCACGAAGCGAAGATGTC TTCCGAGTGGCCGCAATGGCGCGGCGCGCTCAAGCGCGAGATGGACGGCT AGATTGCGCGTGGTGTGTGGAAGGTCGTCGATCGACCTAAAGGAAAAACC GTACTCGGCACCAAGACCGTTTTTAAACGGAAGGTCGGCCAGGATGGCCG TGTAGGAAAATACAAGTGCCGCTTCGTTGCCAAGGGTTTCCGCCAGATCA AGGGGATTCATTACCAAGAATCATCGTCGCCGACACCTACACAGTCGAGC GTCCGGATGGCGCTTGTGGTGATGGCCCTGTTGGACTGGGAGGGGCGGCA ACTTGACGTAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTCT ACGTTGAGCTCCCCGACGGGTATCACGACTCGCCGAACCAGGTTGGACGA CTGCAGAAGGCCATGTGCGGCCTGATGCACGCCGGACTACTGTGGTCGAA GAAGTTCGACGGAGAGTTGGTAGCGAAGGGGTTCGAGAGGTCCCAAGCCG ATCCCTGCGTGTTCTGGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATT GTGGTCTACGTTGACGATCTACTAGTGCTGAGCGAAACAAAGCAGGACGA GCATCGGGCGATGGAAGACCTTCGGTCCAGCTTCCCCATCAAGGATCTAG GGGAGATCTCGTTCTACCTGGGATGTCACATTACTCGGGACCGCAAAGCC AGGACGGTGACGTTCGATCAGCAGCGTTACGCGCAGACGGTAACCGAGCG ATTCGGAATTCGGAAGACAGCGTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1420:45683..46507+

>mRNA_F-serratus_M_contig1420.3033.1 ID=mRNA_F-serratus_M_contig1420.3033.1|Name=mRNA_F-serratus_M_contig1420.3033.1|organism=Fucus serratus male|type=CDS|length=1038bp|location=Sequence derived from alignment at F-serratus_M_contig1420:45683..46507+ (Fucus serratus male)
ATGGCGCTTGTGGTGATGGCCCTGTTGGACTGGGAGGGGCGGCAACTTGA
CGTAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTCTACGTTG
AGCTCCCCGACGGGTATCACGACTCGCCGAACCAGGTTGGACGACTGCAG
AAGGCCATGTGCGGCCTGATGCACGCCGGACTACTGTGGTCGAAGAAGTT
CGACGGAGAGTTGGTAGCGAAGGGGTTCGAGAGGTCCCAAGCCGATCCCT
GCGTGTTCTGGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATTGTGGTC
TACGTTGACGATCTACTAGTGCTGAGCGAAACAAAGCAGGACGAGCATCG
GGCGATGGAAGACCTTCGGTCCAGCTTCCCCATCAAGGATCTAGGGGAGA
TCTCGTTCTACCTGGGATGTCACATTACTCGGGACCGCAAAGCCAGGACG
GTGACGTTCGATCAGCAGCGTTACGCGCAGACGGTAACCGAGCGATTCGG
AATTCGGAAGACAGCGTGAATGGCGCTTGTGGTGATGGCCCTGTTGGACT
GGGAGGGGCGGCAACTTGACGTAGAAATGGCGTTTCTCGAGGCGGATGTT
ACGGAGGAGCTCTACGTTGAGCTCCCCGACGGGTATCACGACTCGCCGAA
CCAGGTTGGACGACTGCAGAAGGCCATGTGCGGCCTGATGCACGCCGGAC
TACTGTGGTCGAAGAAGTTCGACGGAGAGTTGGTAGCGAAGGGGTTCGAG
AGGTCCCAAGCCGATCCCTGCGTGTTCTGGCGGAAGCATCTAGGGAAGGT
CGTCGTCATCATTGTGGTCTACGTTGACGATCTACTAGTGCTGAGCGAAA
CAAAGCAGGACGAGCATCGGGCGATGGAAGACCTTCGGTCCAGCTTCCCC
ATCAAGGATCTAGGGGAGATCTCGTTCTACCTGGGATGTCACATTACTCG
GGACCGCAAAGCCAGGACGGTGACGTTCGATCAGCAGCGTTACGCGCAGA
CGGTAACCGAGCGATTCGGAATTCGGAAGACAGCGTGA
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